RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 GNG2P59768 71 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 ST20Q9HBF5 79 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.15□□□□□ -2.43
USP44-207ENST00000552237 RB1CC1Q8TDY2 1594 aa-0.15□□□□□ -2.43
USP44-207ENST00000552237 NCOA2Q15596 1464 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 RALGAPBQ86X10 1494 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 TACC2O95359 2948 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 ANKRD36CQ5JPF3 1778 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 SCN11AQ9UI33 1791 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 ABCC1P33527 1531 aa-0.16□□□□□ -2.43
USP44-207ENST00000552237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.16□□□□□ -2.43
USP44-207ENST00000552237 ZNF831Q5JPB2 1677 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 PRLHP81277 87 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 DEFA5Q01523 94 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 NREPQ16612 68 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 TNRC18O15417 2968 aaPredicted RBP-0.16□□□□□ -2.44
USP44-207ENST00000552237 CCDC18Q5T9S5 1454 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 TMEM131LA2VDJ0 1609 aa-0.16□□□□□ -2.44
USP44-207ENST00000552237 AKAP13Q12802 2813 aa-0.17□□□□□ -2.44
USP44-207ENST00000552237 BPTFQ12830 3046 aa-0.17□□□□□ -2.44
USP44-207ENST00000552237 IAPPP10997 89 aa-0.17□□□□□ -2.44
USP44-207ENST00000552237 LELP1Q5T871 98 aa-0.17□□□□□ -2.44
USP44-207ENST00000552237 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.17□□□□□ -2.44
USP44-207ENST00000552237 ANKRD11Q6UB99 2663 aaPredicted RBP-0.17□□□□□ -2.44
USP44-207ENST00000552237 KIAA0586Q9BVV6 1533 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 KDM5DQ9BY66 1539 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 NRAPQ86VF7 1730 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 DIP2BQ9P265 1576 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 DEFB131BA0A096LNP1 70 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 LCE6AA0A183 80 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 SMIM13P0DJ93 91 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 BVES-AS1Q5T3Y7 98 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 DEFB106AQ8N104 65 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 ITPR3Q14573 2671 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 MGAM2Q2M2H8 2515 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 UTP20O75691 2785 aaKnown RBP-0.18□□□□□ -2.44
USP44-207ENST00000552237 MAP3K1Q13233 1512 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 RICTORQ6R327 1708 aa-0.18□□□□□ -2.44
USP44-207ENST00000552237 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
USP44-207ENST00000552237 ANKARQ7Z5J8 1434 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 USP9YO00507 2555 aaPredicted RBP-0.19□□□□□ -2.44
USP44-207ENST00000552237 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 LYNX1G3V0Z9 82 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 H3BUA1 57 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 DEFB110Q30KQ9 67 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 KRTAP6-2Q3LI66 62 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 WIZO95785 1651 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 RIF1Q5UIP0 2472 aaKnown RBP-0.19□□□□□ -2.44
USP44-207ENST00000552237 GCN1Q92616 2671 aaKnown RBP-0.19□□□□□ -2.44
USP44-207ENST00000552237 NBEAQ8NFP9 2946 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 DCAF1Q9Y4B6 1507 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 NBEAL2Q6ZNJ1 2754 aa-0.19□□□□□ -2.44
USP44-207ENST00000552237 SVEP1Q4LDE5 3571 aa-0.2□□□□□ -2.44
USP44-207ENST00000552237 DSPP15924 2871 aaKnown RBP-0.2□□□□□ -2.44
USP44-207ENST00000552237 LRRIQ1Q96JM4 1722 aa-0.2□□□□□ -2.44
USP44-207ENST00000552237 S4R3F8 94 aa-0.2□□□□□ -2.44
USP44-207ENST00000552237 DMXL1Q9Y485 3027 aa-0.2□□□□□ -2.44
USP44-207ENST00000552237 H3BUT2 72 aa-0.21□□□□□ -2.44
USP44-207ENST00000552237 H3BVH4 76 aa-0.21□□□□□ -2.44
USP44-207ENST00000552237 MINOS1Q5TGZ0 78 aa-0.21□□□□□ -2.44
USP44-207ENST00000552237 SPRR2FQ96RM1 72 aa-0.21□□□□□ -2.44
USP44-207ENST00000552237 NOP10Q9NPE3 64 aaKnown RBP-0.21□□□□□ -2.44
USP44-207ENST00000552237 ZC3H13Q5T200 1668 aaKnown RBP-0.21□□□□□ -2.44
USP44-207ENST00000552237 TJP1Q07157 1748 aa-0.21□□□□□ -2.44
USP44-207ENST00000552237 PARP4Q9UKK3 1724 aaKnown RBP-0.21□□□□□ -2.44
USP44-207ENST00000552237 ARHGAP35Q9NRY4 1499 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 LAMA1P25391 3075 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 MT1AP04731 61 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 DEFB130BP0DP73 79 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 DEFB130AP0DP74 79 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 DEFB121Q5J5C9 76 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 ACACBO00763 2458 aa-0.22□□□□□ -2.44
USP44-207ENST00000552237 FLGP20930 4061 aaPredicted RBP-0.23□□□□□ -2.45
USP44-207ENST00000552237 CFAP74Q9C0B2 1584 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 MROH1Q8NDA8 1641 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 ETDCA0A1B0GVM5 59 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 H0YAA0 97 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 KCNQ1DNQ9H478 68 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 GNG13Q9P2W3 67 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 LMTK2Q8IWU2 1503 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 SMARCA2P51531 1590 aa-0.23□□□□□ -2.45
USP44-207ENST00000552237 KALRNO60229 2985 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 FCER1GP30273 86 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 ATXN8Q156A1 80 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 PCLOQ9Y6V0 5065 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 TLN2Q9Y4G6 2542 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 INO80Q9ULG1 1556 aaPredicted RBP-0.24□□□□□ -2.45
USP44-207ENST00000552237 KIF1AQ12756 1690 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 NHSQ6T4R5 1651 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 MYO5CQ9NQX4 1742 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 TOGARAM1Q9Y4F4 1720 aa-0.24□□□□□ -2.45
USP44-207ENST00000552237 MMP24-AS1A0A0U1RRL7 71 aa-0.25□□□□□ -2.45
USP44-207ENST00000552237 WT1-ASQ06250 92 aa-0.25□□□□□ -2.45
USP44-207ENST00000552237 TDRG1Q3Y452 100 aa-0.25□□□□□ -2.45
USP44-207ENST00000552237 CLPSL2Q6UWE3 100 aa-0.25□□□□□ -2.45
USP44-207ENST00000552237 ABRACLQ9P1F3 81 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms