RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 HIST1H2BJP06899 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HRES1P13985 223 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BOP23527 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BBP33778 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BDP58876 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BCP62807 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST2H2BEQ16778 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 COA6Q5JTJ3 125 aaKnown RBP6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BHQ93079 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BNQ99877 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 HIST1H2BMQ99879 126 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 SPANXDQ9BXN6 97 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 TRAPPC1Q9Y5R8 145 aa6.15□□□□□ -1.42
CACNB3-221ENST00000552022 TRBV7-6A0A0J9YX20 115 aa6.14□□□□□ -1.43
CACNB3-221ENST00000552022 LINC00308Q8TCZ7 52 aa6.14□□□□□ -1.43
CACNB3-221ENST00000552022 H0Y8G0 127 aa6.13□□□□□ -1.43
CACNB3-221ENST00000552022 SNRPEP62304 92 aaKnown RBP6.13□□□□□ -1.43
CACNB3-221ENST00000552022 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
CACNB3-221ENST00000552022 LITAFQ99732 161 aa6.11□□□□□ -1.43
CACNB3-221ENST00000552022 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
CACNB3-221ENST00000552022 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
CACNB3-221ENST00000552022 PCP4P48539 62 aa6.1□□□□□ -1.43
CACNB3-221ENST00000552022 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
CACNB3-221ENST00000552022 HERVK_113P61574 105 aa6.09□□□□□ -1.43
CACNB3-221ENST00000552022 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
CACNB3-221ENST00000552022 LST1O00453 97 aa6.08□□□□□ -1.44
CACNB3-221ENST00000552022 PLNP26678 52 aa6.08□□□□□ -1.44
CACNB3-221ENST00000552022 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
CACNB3-221ENST00000552022 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
CACNB3-221ENST00000552022 F8WEM9 126 aa6.07□□□□□ -1.44
CACNB3-221ENST00000552022 Q6JHZ5 121 aa6.07□□□□□ -1.44
CACNB3-221ENST00000552022 CLEC2BQ92478 149 aa6.07□□□□□ -1.44
CACNB3-221ENST00000552022 Q6ZVH6 145 aa6.06□□□□□ -1.44
CACNB3-221ENST00000552022 PMCHL2Q9BQD1 86 aa6.06□□□□□ -1.44
CACNB3-221ENST00000552022 KMT2DO14686 5537 aa6.06□□□□□ -1.44
CACNB3-221ENST00000552022 DPM2O94777 84 aa6.05□□□□□ -1.44
CACNB3-221ENST00000552022 HIST1H2BLQ99880 126 aa6.05□□□□□ -1.44
CACNB3-221ENST00000552022 A8MWP4 228 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 KRTAP2-3P0C7H8 128 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 SMIM6P0DI80 62 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 KRTAP5-9P26371 169 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 S100A2P29034 98 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 KRTAP2-4Q9BYR9 128 aa6.04□□□□□ -1.44
CACNB3-221ENST00000552022 IGKCP01834 107 aa6.03□□□□□ -1.44
CACNB3-221ENST00000552022 DSCR10P59022 87 aa6.03□□□□□ -1.44
CACNB3-221ENST00000552022 LINC00310P59036 64 aa6.03□□□□□ -1.44
CACNB3-221ENST00000552022 TIMM17BO60830 172 aa6.02□□□□□ -1.45
CACNB3-221ENST00000552022 HSBP1O75506 76 aa6.02□□□□□ -1.45
CACNB3-221ENST00000552022 SERF1AO75920 110 aa6.02□□□□□ -1.45
CACNB3-221ENST00000552022 E9PLD3 99 aa6.01□□□□□ -1.45
CACNB3-221ENST00000552022 FABP4P15090 132 aa6.01□□□□□ -1.45
CACNB3-221ENST00000552022 OCIAD2Q56VL3 154 aa6.01□□□□□ -1.45
CACNB3-221ENST00000552022 NHP2Q9NX24 153 aaKnown RBP6.01□□□□□ -1.45
CACNB3-221ENST00000552022 LEPROTL1O95214 131 aa6□□□□□ -1.45
CACNB3-221ENST00000552022 C12orf57Q99622 126 aa6□□□□□ -1.45
CACNB3-221ENST00000552022 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
CACNB3-221ENST00000552022 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
CACNB3-221ENST00000552022 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
CACNB3-221ENST00000552022 A6NDN8 102 aa5.97□□□□□ -1.45
CACNB3-221ENST00000552022 ZNF815PA8K554 130 aa5.97□□□□□ -1.45
CACNB3-221ENST00000552022 A6NN06 94 aa5.96□□□□□ -1.46
CACNB3-221ENST00000552022 Q6ZQY7 126 aa5.95□□□□□ -1.46
CACNB3-221ENST00000552022 SMIM11BQ8TCY0 68 aa5.94□□□□□ -1.46
CACNB3-221ENST00000552022 SS18L2Q9UHA2 77 aa5.94□□□□□ -1.46
CACNB3-221ENST00000552022 LINC00575Q6W349 94 aa5.93□□□□□ -1.46
CACNB3-221ENST00000552022 TTTY13Q9BZ97 58 aa5.93□□□□□ -1.46
CACNB3-221ENST00000552022 H3BUT2 72 aa5.92□□□□□ -1.46
CACNB3-221ENST00000552022 LINC00313P59037 77 aa5.92□□□□□ -1.46
CACNB3-221ENST00000552022 HSPB8Q9UJY1 196 aa5.92□□□□□ -1.46
CACNB3-221ENST00000552022 C3orf79P0CE67 100 aa5.91□□□□□ -1.46
CACNB3-221ENST00000552022 hADV29S1A0JD25 119 aa5.89□□□□□ -1.47
CACNB3-221ENST00000552022 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
CACNB3-221ENST00000552022 KRTDAPP60985 99 aa5.89□□□□□ -1.47
CACNB3-221ENST00000552022 A0A087WSZ3 146 aa5.87□□□□□ -1.47
CACNB3-221ENST00000552022 VAMP3Q15836 100 aa5.87□□□□□ -1.47
CACNB3-221ENST00000552022 TEN1Q86WV5 123 aa5.87□□□□□ -1.47
CACNB3-221ENST00000552022 TSTD3H0UI37 97 aa5.86□□□□□ -1.47
CACNB3-221ENST00000552022 LINC01545Q5VT33 79 aa5.86□□□□□ -1.47
CACNB3-221ENST00000552022 SNHG12Q9BXW3 62 aa5.86□□□□□ -1.47
CACNB3-221ENST00000552022 IFITM1P13164 125 aa5.85□□□□□ -1.47
CACNB3-221ENST00000552022 SPINK7P58062 85 aa5.85□□□□□ -1.47
CACNB3-221ENST00000552022 MUSTN1Q8IVN3 82 aa5.85□□□□□ -1.47
CACNB3-221ENST00000552022 SIGMAR1Q99720 223 aa5.85□□□□□ -1.47
CACNB3-221ENST00000552022 PCP4L1A6NKN8 68 aa5.84□□□□□ -1.47
CACNB3-221ENST00000552022 MT1BP07438 61 aa5.84□□□□□ -1.47
CACNB3-221ENST00000552022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.84□□□□□ -1.47
CACNB3-221ENST00000552022 COPS9Q8WXC6 57 aa5.84□□□□□ -1.47
CACNB3-221ENST00000552022 VAMP8Q9BV40 100 aa5.84□□□□□ -1.47
CACNB3-221ENST00000552022 PPDPFLQ8WWR9 84 aa5.83□□□□□ -1.48
CACNB3-221ENST00000552022 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
CACNB3-221ENST00000552022 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
CACNB3-221ENST00000552022 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
CACNB3-221ENST00000552022 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
CACNB3-221ENST00000552022 TRIAP1O43715 76 aa5.8□□□□□ -1.48
CACNB3-221ENST00000552022 IGKV4-1P06312 121 aa5.8□□□□□ -1.48
CACNB3-221ENST00000552022 SPATA45Q537H7 98 aa5.8□□□□□ -1.48
CACNB3-221ENST00000552022 PAM16Q9Y3D7 125 aa5.8□□□□□ -1.48
CACNB3-221ENST00000552022 A0A1W2PNM2 257 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms