RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TEX15Q9BXT5 2789 aa-1.25□□□□□ -2.61
GPN3-209ENST00000551079 PLXNC1O60486 1568 aa-1.25□□□□□ -2.61
GPN3-209ENST00000551079 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.25□□□□□ -2.61
GPN3-209ENST00000551079 TRAV21A0A0B4J279 112 aa-1.26□□□□□ -2.61
GPN3-209ENST00000551079 HMGN2P05204 90 aaKnown RBP-1.26□□□□□ -2.61
GPN3-209ENST00000551079 LINC00032P0C843 101 aa-1.26□□□□□ -2.61
GPN3-209ENST00000551079 A0A1B0GUT8 65 aa-1.27□□□□□ -2.61
GPN3-209ENST00000551079 COX6B2Q6YFQ2 88 aa-1.27□□□□□ -2.61
GPN3-209ENST00000551079 ANKRD50Q9ULJ7 1429 aa-1.27□□□□□ -2.61
GPN3-209ENST00000551079 MAP3K1Q13233 1512 aa-1.27□□□□□ -2.61
GPN3-209ENST00000551079 NWD1Q149M9 1564 aa-1.27□□□□□ -2.61
GPN3-209ENST00000551079 SACSQ9NZJ4 4579 aa-1.28□□□□□ -2.61
GPN3-209ENST00000551079 PLECQ15149 4684 aaKnown RBP-1.28□□□□□ -2.61
GPN3-209ENST00000551079 C9orf92A6NGG3 77 aa-1.28□□□□□ -2.61
GPN3-209ENST00000551079 LAMA3Q16787 3333 aa-1.29□□□□□ -2.62
GPN3-209ENST00000551079 PLGLAQ15195 96 aa-1.29□□□□□ -2.62
GPN3-209ENST00000551079 ACBD7Q8N6N7 88 aa-1.29□□□□□ -2.62
GPN3-209ENST00000551079 SNHG12Q9BXW3 62 aa-1.29□□□□□ -2.62
GPN3-209ENST00000551079 WIZO95785 1651 aa-1.29□□□□□ -2.62
GPN3-209ENST00000551079 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.3□□□□□ -2.62
GPN3-209ENST00000551079 H0YAA0 97 aa-1.3□□□□□ -2.62
GPN3-209ENST00000551079 LINC00158P58513 81 aa-1.3□□□□□ -2.62
GPN3-209ENST00000551079 DEFA5Q01523 94 aa-1.3□□□□□ -2.62
GPN3-209ENST00000551079 WFDC9Q8NEX5 89 aa-1.3□□□□□ -2.62
GPN3-209ENST00000551079 RIF1Q5UIP0 2472 aaKnown RBP-1.3□□□□□ -2.62
GPN3-209ENST00000551079 NIPBLQ6KC79 2804 aaeCLIP-1.31□□□□□ -2.62
GPN3-209ENST00000551079 M0R143 59 aa-1.31□□□□□ -2.62
GPN3-209ENST00000551079 RPL38P63173 70 aaKnown RBP-1.31□□□□□ -2.62
GPN3-209ENST00000551079 PRO3102Q9H379 93 aa-1.31□□□□□ -2.62
GPN3-209ENST00000551079 S4R3F8 94 aa-1.31□□□□□ -2.62
GPN3-209ENST00000551079 TRIOO75962 3097 aa-1.31□□□□□ -2.62
GPN3-209ENST00000551079 ARFGEF2Q9Y6D5 1785 aa-1.31□□□□□ -2.62
GPN3-209ENST00000551079 DNAH8Q96JB1 4490 aa-1.32□□□□□ -2.62
GPN3-209ENST00000551079 PEA15Q15121 130 aa-1.32□□□□□ -2.62
GPN3-209ENST00000551079 RELNP78509 3460 aa-1.32□□□□□ -2.62
GPN3-209ENST00000551079 CEP162Q5TB80 1403 aa-1.32□□□□□ -2.62
GPN3-209ENST00000551079 RANBP2P49792 3224 aaKnown RBP-1.33□□□□□ -2.62
GPN3-209ENST00000551079 TLN2Q9Y4G6 2542 aa-1.34□□□□□ -2.62
GPN3-209ENST00000551079 NCOA2Q15596 1464 aa-1.34□□□□□ -2.62
GPN3-209ENST00000551079 CMYA5Q8N3K9 4069 aa-1.34□□□□□ -2.62
GPN3-209ENST00000551079 DDX60LQ5H9U9 1706 aaKnown RBP-1.35□□□□□ -2.62
GPN3-209ENST00000551079 MYMXA0A1B0GTQ4 84 aa-1.35□□□□□ -2.63
GPN3-209ENST00000551079 C3orf79P0CE67 100 aa-1.35□□□□□ -2.63
GPN3-209ENST00000551079 DNHD1Q96M86 4753 aa-1.35□□□□□ -2.63
GPN3-209ENST00000551079 PLCH1Q4KWH8 1693 aa-1.35□□□□□ -2.63
GPN3-209ENST00000551079 ANKRD36CQ5JPF3 1778 aa-1.36□□□□□ -2.63
GPN3-209ENST00000551079 CYB5AP00167 134 aa-1.36□□□□□ -2.63
GPN3-209ENST00000551079 PRLHP81277 87 aa-1.36□□□□□ -2.63
GPN3-209ENST00000551079 ABCA13Q86UQ4 5058 aa-1.37□□□□□ -2.63
GPN3-209ENST00000551079 GYPAP02724 150 aa-1.37□□□□□ -2.63
GPN3-209ENST00000551079 ACYP1P07311 99 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 DEFB130BP0DP73 79 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 DEFB130AP0DP74 79 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 DEFB110Q30KQ9 67 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 DEPDC5O75140 1603 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 C5orf42Q9H799 3197 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 DIP2BQ9P265 1576 aa-1.38□□□□□ -2.63
GPN3-209ENST00000551079 PIK3C2BO00750 1634 aa-1.39□□□□□ -2.63
GPN3-209ENST00000551079 SMIM11AP58511 58 aa-1.39□□□□□ -2.63
GPN3-209ENST00000551079 VPS8Q8N3P4 1428 aa-1.4□□□□□ -2.63
GPN3-209ENST00000551079 CELSR3Q9NYQ7 3312 aa-1.4□□□□□ -2.63
GPN3-209ENST00000551079 KRTAP19-5Q3LI72 72 aa-1.4□□□□□ -2.63
GPN3-209ENST00000551079 PLIN4Q96Q06 1357 aa-1.4□□□□□ -2.63
GPN3-209ENST00000551079 PPLO60437 1756 aa-1.4□□□□□ -2.63
GPN3-209ENST00000551079 LCE6AA0A183 80 aa-1.41□□□□□ -2.64
GPN3-209ENST00000551079 IAPPP10997 89 aa-1.41□□□□□ -2.64
GPN3-209ENST00000551079 PKIAP61925 76 aa-1.41□□□□□ -2.64
GPN3-209ENST00000551079 TJP1Q07157 1748 aa-1.41□□□□□ -2.64
GPN3-209ENST00000551079 RICTORQ6R327 1708 aa-1.41□□□□□ -2.64
GPN3-209ENST00000551079 MT1HP80294 61 aa-1.42□□□□□ -2.64
GPN3-209ENST00000551079 DEFB106AQ8N104 65 aa-1.42□□□□□ -2.64
GPN3-209ENST00000551079 KIF14Q15058 1648 aa-1.42□□□□□ -2.64
GPN3-209ENST00000551079 MAGI3Q5TCQ9 1506 aa-1.42□□□□□ -2.64
GPN3-209ENST00000551079 ITSN1Q15811 1721 aa-1.43□□□□□ -2.64
GPN3-209ENST00000551079 CEBPZOSA8MTT3 80 aa-1.43□□□□□ -2.64
GPN3-209ENST00000551079 LYNX1G3V0Z9 82 aa-1.43□□□□□ -2.64
GPN3-209ENST00000551079 SPTBN5Q9NRC6 3674 aaKnown RBP-1.44□□□□□ -2.64
GPN3-209ENST00000551079 K7EP34 96 aa-1.44□□□□□ -2.64
GPN3-209ENST00000551079 IFI6P09912 130 aa-1.44□□□□□ -2.64
GPN3-209ENST00000551079 RABAC1Q9UI14 185 aa-1.44□□□□□ -2.64
GPN3-209ENST00000551079 FRYQ5TBA9 3013 aa-1.45□□□□□ -2.64
GPN3-209ENST00000551079 LINC00643Q86TS7 51 aa-1.45□□□□□ -2.64
GPN3-209ENST00000551079 S100A16Q96FQ6 103 aaKnown RBP-1.45□□□□□ -2.64
GPN3-209ENST00000551079 URB2Q14146 1524 aaKnown RBP-1.45□□□□□ -2.64
GPN3-209ENST00000551079 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.46□□□□□ -2.64
GPN3-209ENST00000551079 DNAH7Q8WXX0 4024 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 BPTFQ12830 3046 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 SRCAPQ6ZRS2 3230 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 NDUFA4O00483 81 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 S100A8P05109 93 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 SNRPFP62306 86 aaKnown RBP-1.46□□□□□ -2.64
GPN3-209ENST00000551079 SPENQ96T58 3664 aaKnown RBP-1.46□□□□□ -2.64
GPN3-209ENST00000551079 CFAP43Q8NDM7 1665 aa-1.46□□□□□ -2.64
GPN3-209ENST00000551079 PARP4Q9UKK3 1724 aaKnown RBP-1.46□□□□□ -2.64
GPN3-209ENST00000551079 COL6A5A8TX70 2615 aa-1.47□□□□□ -2.64
GPN3-209ENST00000551079 MAP3K4Q9Y6R4 1608 aa-1.47□□□□□ -2.64
GPN3-209ENST00000551079 UMAD1C9J7I0 102 aa-1.48□□□□□ -2.65
GPN3-209ENST00000551079 NDUFB1O75438 58 aa-1.48□□□□□ -2.65
GPN3-209ENST00000551079 TDRG1Q3Y452 100 aa-1.48□□□□□ -2.65
GPN3-209ENST00000551079 PYY3Q5JQD4 70 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms