RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 WT1-ASQ06250 92 aa2.08□□□□□ -2.08
LETMD1-226ENST00000550755 SPINK13Q1W4C9 94 aa2.08□□□□□ -2.08
LETMD1-226ENST00000550755 TMEM263Q8WUH6 116 aaKnown RBP2.08□□□□□ -2.08
LETMD1-226ENST00000550755 COL6A6A6NMZ7 2263 aa2.08□□□□□ -2.08
LETMD1-226ENST00000550755 DCHS1Q96JQ0 3298 aa2.08□□□□□ -2.08
LETMD1-226ENST00000550755 ATMQ13315 3056 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 I3L2K1 104 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 KLK9Q2XQG4 91 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 ATP5EP2Q5VTU8 51 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 C10orf113Q5VZT2 155 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 PLAC8Q9NZF1 115 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.07□□□□□ -2.081e-7■■■■□ 24
LETMD1-226ENST00000550755 HRNRQ86YZ3 2850 aaPredicted RBP2.07□□□□□ -2.08
LETMD1-226ENST00000550755 DOPEY1Q5JWR5 2465 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 PKD1L2Q7Z442 2459 aa2.07□□□□□ -2.08
LETMD1-226ENST00000550755 CHD8Q9HCK8 2581 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 SMG1Q96Q15 3661 aaKnown RBP2.06□□□□□ -2.08
LETMD1-226ENST00000550755 ADGRG4Q8IZF6 3080 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
LETMD1-226ENST00000550755 SMIM27A0A1W2PRY6 76 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 K7EIM0 57 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 LY6G6CO95867 125 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 MINOS1Q5TGZ0 78 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 Q6ZRX8 168 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 NBEAQ8NFP9 2946 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 DMXL2Q8TDJ6 3036 aa2.06□□□□□ -2.08
LETMD1-226ENST00000550755 AKAP6Q13023 2319 aa2.05□□□□□ -2.08
LETMD1-226ENST00000550755 A0A1B0GUT8 65 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 LYNX1G3V0Z9 82 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 J3QKU1 62 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 LYNX1P0DP58 116 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 IFI27P40305 119 aaPredicted RBP2.04□□□□□ -2.08
LETMD1-226ENST00000550755 SPINK7P58062 85 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
LETMD1-226ENST00000550755 SPTAN1Q13813 2472 aaKnown RBP2.03□□□□□ -2.08
LETMD1-226ENST00000550755 RELNP78509 3460 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 USP9XQ93008 2570 aaPredicted RBP2.03□□□□□ -2.08
LETMD1-226ENST00000550755 TRBV7-4A0A0J9YYF1 115 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 G3V318 75 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 CNFNQ9BYD5 112 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 ACACBO00763 2458 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 CREBBPQ92793 2442 aa2.03□□□□□ -2.08
LETMD1-226ENST00000550755 APELAP0DMC3 54 aa2.02□□□□□ -2.09
LETMD1-226ENST00000550755 COX8AP10176 69 aa2.02□□□□□ -2.09
LETMD1-226ENST00000550755 RPL37P61927 97 aaKnown RBP2.02□□□□□ -2.09
LETMD1-226ENST00000550755 PRB3Q04118 309 aaPredicted RBP2.02□□□□□ -2.09
LETMD1-226ENST00000550755 FAM103A1Q9BTL3 118 aaKnown RBP2.02□□□□□ -2.09
LETMD1-226ENST00000550755 HILPDAQ9Y5L2 63 aa2.02□□□□□ -2.09
LETMD1-226ENST00000550755 KALRNO60229 2985 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 SPG11Q96JI7 2443 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 ZFHX3Q15911 3703 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 CSPG4Q6UVK1 2322 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 ITPR1Q14643 2758 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 CFAP46Q8IYW2 2715 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 USP24Q9UPU5 2620 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 LINC01546A6NGU7 62 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 H3BUA1 57 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 H3BVH4 76 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 SPINK4O60575 86 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 C3orf79P0CE67 100 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 CRIP1P50238 77 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 HAMPP81172 84 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 CRCT1Q9UGL9 99 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 DCHS2Q6V1P9 2916 aa2.01□□□□□ -2.09
LETMD1-226ENST00000550755 LRRK2Q5S007 2527 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 PTPN13Q12923 2485 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 FLG2Q5D862 2391 aaPredicted RBP2□□□□□ -2.09
LETMD1-226ENST00000550755 ZZEF1O43149 2961 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 ANKRD17O75179 2603 aaKnown RBP2□□□□□ -2.09
LETMD1-226ENST00000550755 IGSF10Q6WRI0 2623 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 USP9YO00507 2555 aaPredicted RBP2□□□□□ -2.09
LETMD1-226ENST00000550755 MYO18BQ8IUG5 2567 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 PRB1P04280 392 aa2□□□□□ -2.09
LETMD1-226ENST00000550755 FAM208BQ5VWN6 2430 aa1.99□□□□□ -2.09
LETMD1-226ENST00000550755 NDUFA4O00483 81 aa1.99□□□□□ -2.09
LETMD1-226ENST00000550755 USMG5Q96IX5 58 aa1.99□□□□□ -2.09
LETMD1-226ENST00000550755 ZFYVE26Q68DK2 2539 aa1.99□□□□□ -2.09
LETMD1-226ENST00000550755 FLNCQ14315 2725 aa1.99□□□□□ -2.09
LETMD1-226ENST00000550755 MYO9AB2RTY4 2548 aa1.98□□□□□ -2.09
LETMD1-226ENST00000550755 ZNF462Q96JM2 2506 aa1.98□□□□□ -2.09
LETMD1-226ENST00000550755 KMT2BQ9UMN6 2715 aaPredicted RBP1.98□□□□□ -2.09
LETMD1-226ENST00000550755 NAV2Q8IVL1 2488 aa1.98□□□□□ -2.09
LETMD1-226ENST00000550755 LRBAP50851 2863 aa1.98□□□□□ -2.09
LETMD1-226ENST00000550755 UBR5O95071 2799 aaPredicted RBP1.97□□□□□ -2.09
LETMD1-226ENST00000550755 TACC2O95359 2948 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 A0A1B0GU69 56 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 K7EMI3 77 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 DOPEY2Q9Y3R5 2298 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 SVEP1Q4LDE5 3571 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 CSMD1Q96PZ7 3565 aa1.97□□□□□ -2.09
LETMD1-226ENST00000550755 ANK3Q12955 4377 aaKnown RBP1.96□□□□□ -2.1
LETMD1-226ENST00000550755 POLQO75417 2590 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 ABCA12Q86UK0 2595 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 TRAV21A0A0B4J279 112 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 A8MTW9 85 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 H3BUX3 64 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 NDUFB1O75438 58 aa1.96□□□□□ -2.1
LETMD1-226ENST00000550755 FCER1GP30273 86 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms