RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
PRDM4-205ENST00000550376 DNAH11Q96DT5 4516 aa12.97□□□□□ -0.33
PRDM4-205ENST00000550376 C9orf153Q5TBE3 101 aa12.96□□□□□ -0.33
PRDM4-205ENST00000550376 A0A1W2PNM2 257 aa12.96□□□□□ -0.34
PRDM4-205ENST00000550376 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
PRDM4-205ENST00000550376 KRTAP10-2P60368 255 aa12.93□□□□□ -0.34
PRDM4-205ENST00000550376 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
PRDM4-205ENST00000550376 BCE1O60756 84 aa12.9□□□□□ -0.34
PRDM4-205ENST00000550376 UQCRQO14949 82 aa12.9□□□□□ -0.34
PRDM4-205ENST00000550376 Q8N9L7 120 aa12.89□□□□□ -0.35
PRDM4-205ENST00000550376 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
PRDM4-205ENST00000550376 ALMS1Q8TCU4 4167 aa12.87□□□□□ -0.35
PRDM4-205ENST00000550376 F8WEM9 126 aa12.87□□□□□ -0.35
PRDM4-205ENST00000550376 NREPQ16612 68 aa12.87□□□□□ -0.35
PRDM4-205ENST00000550376 ATP5EP2Q5VTU8 51 aa12.86□□□□□ -0.35
PRDM4-205ENST00000550376 FAM30AQ9NZY2 134 aa12.86□□□□□ -0.35
PRDM4-205ENST00000550376 PSORS1C2Q9UIG4 136 aa12.86□□□□□ -0.35
PRDM4-205ENST00000550376 IGFL1Q6UW32 110 aa12.86□□□□□ -0.35
PRDM4-205ENST00000550376 PKD1P98161 4303 aa12.86□□□□□ -0.35
PRDM4-205ENST00000550376 KRTAP13-1Q8IUC0 172 aa12.85□□□□□ -0.35
PRDM4-205ENST00000550376 H0Y9J4 135 aa12.85□□□□□ -0.35
PRDM4-205ENST00000550376 Q8NBF4 154 aa12.84□□□□□ -0.35
PRDM4-205ENST00000550376 PLAC8Q9NZF1 115 aa12.83□□□□□ -0.35
PRDM4-205ENST00000550376 COX7CP15954 63 aa12.83□□□□□ -0.36
PRDM4-205ENST00000550376 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
PRDM4-205ENST00000550376 ANAPC11Q9NYG5 84 aa12.79□□□□□ -0.36
PRDM4-205ENST00000550376 CXCL6P80162 114 aa12.79□□□□□ -0.36
PRDM4-205ENST00000550376 CYSTM1Q9H1C7 97 aa12.79□□□□□ -0.36
PRDM4-205ENST00000550376 BPY2O14599 106 aa12.77□□□□□ -0.36
PRDM4-205ENST00000550376 DEFB116Q30KQ4 102 aa12.77□□□□□ -0.37
PRDM4-205ENST00000550376 SPRR4Q96PI1 79 aa12.76□□□□□ -0.37
PRDM4-205ENST00000550376 LRP1BQ9NZR2 4599 aa12.76□□□□□ -0.37
PRDM4-205ENST00000550376 ATOX1O00244 68 aa12.76□□□□□ -0.37
PRDM4-205ENST00000550376 CRYGAP11844 174 aa12.75□□□□□ -0.37
PRDM4-205ENST00000550376 CIRBP-AS1Q8TBR5 109 aa12.75□□□□□ -0.37
PRDM4-205ENST00000550376 IGLV9-49A0A0B4J1Y8 123 aa12.75□□□□□ -0.37
PRDM4-205ENST00000550376 SPRR1BP22528 89 aa12.74□□□□□ -0.37
PRDM4-205ENST00000550376 A0A087WSZ3 146 aa12.73□□□□□ -0.37
PRDM4-205ENST00000550376 KRTAP10-1P60331 282 aa12.73□□□□□ -0.37
PRDM4-205ENST00000550376 J3KT08 172 aa12.72□□□□□ -0.37
PRDM4-205ENST00000550376 PKHD1P08F94 4074 aa12.72□□□□□ -0.37
PRDM4-205ENST00000550376 IGLV8-61A0A075B6I0 122 aa12.72□□□□□ -0.37
PRDM4-205ENST00000550376 IGKV4-1P06312 121 aa12.69□□□□□ -0.38
PRDM4-205ENST00000550376 ZNF861PO60384 105 aa12.67□□□□□ -0.38
PRDM4-205ENST00000550376 HRCT1Q6UXD1 115 aa12.65□□□□□ -0.38
PRDM4-205ENST00000550376 SERP2Q8N6R1 65 aa12.65□□□□□ -0.39
PRDM4-205ENST00000550376 DSCR10P59022 87 aa12.63□□□□□ -0.39
PRDM4-205ENST00000550376 A0A1B0GW54 56 aa12.63□□□□□ -0.39
PRDM4-205ENST00000550376 IGLV7-43P04211 117 aa12.62□□□□□ -0.39
PRDM4-205ENST00000550376 K7EQZ3 153 aa12.61□□□□□ -0.39
PRDM4-205ENST00000550376 RPS28P62857 69 aaKnown RBP12.61□□□□□ -0.39
PRDM4-205ENST00000550376 RPL37AP61513 92 aaKnown RBP12.6□□□□□ -0.39
PRDM4-205ENST00000550376 KMT2CQ8NEZ4 4911 aaKnown RBP12.59□□□□□ -0.39
PRDM4-205ENST00000550376 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
PRDM4-205ENST00000550376 MOBPQ13875 183 aa12.58□□□□□ -0.4
PRDM4-205ENST00000550376 TMEM258P61165 79 aa12.58□□□□□ -0.4
PRDM4-205ENST00000550376 LINC00483Q53H64 154 aa12.58□□□□□ -0.4
PRDM4-205ENST00000550376 OXTP01178 125 aa12.57□□□□□ -0.4
PRDM4-205ENST00000550376 Q6ZSA8 131 aa12.56□□□□□ -0.4
PRDM4-205ENST00000550376 VPS13BQ7Z7G8 4022 aa12.56□□□□□ -0.4
PRDM4-205ENST00000550376 ZNF706Q9Y5V0 76 aaPredicted RBP12.53□□□□□ -0.4
PRDM4-205ENST00000550376 C20orf197Q8N268 126 aa12.5□□□□□ -0.41
PRDM4-205ENST00000550376 LCE6AA0A183 80 aa12.48□□□□□ -0.41
PRDM4-205ENST00000550376 TRAV7A0A075B6U4 112 aa12.47□□□□□ -0.41
PRDM4-205ENST00000550376 C4orf26Q17RF5 130 aa12.47□□□□□ -0.41
PRDM4-205ENST00000550376 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
PRDM4-205ENST00000550376 RYR2Q92736 4967 aa12.47□□□□□ -0.41
PRDM4-205ENST00000550376 LINC00472Q9H8W2 130 aa12.46□□□□□ -0.42
PRDM4-205ENST00000550376 SNURFQ9Y675 71 aa12.44□□□□□ -0.42
PRDM4-205ENST00000550376 WFDC13Q8IUB5 93 aa12.43□□□□□ -0.42
PRDM4-205ENST00000550376 Q5XG85 94 aa12.41□□□□□ -0.42
PRDM4-205ENST00000550376 OCR1Q9BZK8 76 aa12.4□□□□□ -0.42
PRDM4-205ENST00000550376 A0A087X002 238 aa12.39□□□□□ -0.43
PRDM4-205ENST00000550376 HCG22E2RYF7 251 aa12.38□□□□□ -0.43
PRDM4-205ENST00000550376 SMR3BP02814 79 aaPredicted RBP12.37□□□□□ -0.43
PRDM4-205ENST00000550376 Q96NJ1 140 aa12.37□□□□□ -0.43
PRDM4-205ENST00000550376 FAT1Q14517 4588 aa12.36□□□□□ -0.43
PRDM4-205ENST00000550376 PRR15Q8IV56 129 aa12.34□□□□□ -0.43
PRDM4-205ENST00000550376 A8MWP4 228 aa12.33□□□□□ -0.44
PRDM4-205ENST00000550376 KRTAP13-2Q52LG2 175 aa12.31□□□□□ -0.44
PRDM4-205ENST00000550376 FAM236DA0A1B0GTK5 79 aa12.31□□□□□ -0.44
PRDM4-205ENST00000550376 FAM236CP0DP71 79 aa12.31□□□□□ -0.44
PRDM4-205ENST00000550376 A0A1B0GVY2 172 aa12.29□□□□□ -0.44
PRDM4-205ENST00000550376 LINC00336Q6ZUF6 198 aa12.29□□□□□ -0.44
PRDM4-205ENST00000550376 H7BZZ5 65 aa12.29□□□□□ -0.44
PRDM4-205ENST00000550376 SPINK6Q6UWN8 80 aa12.29□□□□□ -0.44
PRDM4-205ENST00000550376 TMEM254Q8TBM7 123 aa12.28□□□□□ -0.44
PRDM4-205ENST00000550376 APOBP04114 4563 aaKnown RBP12.27□□□□□ -0.44
PRDM4-205ENST00000550376 KRTAP1-4P0C5Y4 121 aa12.26□□□□□ -0.45
PRDM4-205ENST00000550376 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
PRDM4-205ENST00000550376 KRTAP29-1A8MX34 341 aaPredicted RBP12.25□□□□□ -0.45
PRDM4-205ENST00000550376 RYR3Q15413 4870 aa12.24□□□□□ -0.45
PRDM4-205ENST00000550376 KLKP1Q107X0 134 aa12.24□□□□□ -0.45
PRDM4-205ENST00000550376 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
PRDM4-205ENST00000550376 NDUFB1O75438 58 aa12.22□□□□□ -0.45
PRDM4-205ENST00000550376 PLA2G1BP04054 148 aaKnown RBP12.21□□□□□ -0.45
PRDM4-205ENST00000550376 SSBP3-AS1Q7Z2R9 100 aa12.21□□□□□ -0.45
PRDM4-205ENST00000550376 NOTCH2NLQ7Z3S9 236 aa12.21□□□□□ -0.45
PRDM4-205ENST00000550376 MMP24-AS1A0A0U1RRL7 71 aa12.21□□□□□ -0.46
PRDM4-205ENST00000550376 SERP1Q9Y6X1 66 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms