RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 IGFL1Q6UW32 110 aa5.91□□□□□ -1.46
SMARCD1-208ENST00000550280 PCP2Q8IVA1 136 aa5.91□□□□□ -1.46
SMARCD1-208ENST00000550280 A4D1N5 150 aa5.9□□□□□ -1.46
SMARCD1-208ENST00000550280 IFITM1P13164 125 aa5.9□□□□□ -1.46
SMARCD1-208ENST00000550280 SCGB1D4Q6XE38 83 aa5.9□□□□□ -1.46
SMARCD1-208ENST00000550280 MT2AP02795 61 aa5.89□□□□□ -1.47
SMARCD1-208ENST00000550280 CFC1P0CG37 223 aa5.89□□□□□ -1.47
SMARCD1-208ENST00000550280 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
SMARCD1-208ENST00000550280 LINC00575Q6W349 94 aa5.88□□□□□ -1.47
SMARCD1-208ENST00000550280 Q6ZQY7 126 aa5.88□□□□□ -1.47
SMARCD1-208ENST00000550280 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
SMARCD1-208ENST00000550280 NHP2Q9NX24 153 aaKnown RBP5.88□□□□□ -1.47
SMARCD1-208ENST00000550280 SLC7A5P1Q8MH63 180 aa5.87□□□□□ -1.47
SMARCD1-208ENST00000550280 TRAV13-2A0A0B4J235 113 aa5.86□□□□□ -1.47
SMARCD1-208ENST00000550280 Q6JHZ5 121 aa5.86□□□□□ -1.47
SMARCD1-208ENST00000550280 Q6ZVH6 145 aa5.86□□□□□ -1.47
SMARCD1-208ENST00000550280 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
SMARCD1-208ENST00000550280 ATOH7Q8N100 152 aa5.86□□□□□ -1.47
SMARCD1-208ENST00000550280 F8WEM9 126 aa5.85□□□□□ -1.47
SMARCD1-208ENST00000550280 MT1FP04733 61 aa5.85□□□□□ -1.47
SMARCD1-208ENST00000550280 KRTDAPP60985 99 aa5.85□□□□□ -1.47
SMARCD1-208ENST00000550280 OCIAD2Q56VL3 154 aa5.85□□□□□ -1.47
SMARCD1-208ENST00000550280 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
SMARCD1-208ENST00000550280 A8MUU9 505 aa5.84□□□□□ -1.47
SMARCD1-208ENST00000550280 Q96NJ1 140 aa5.84□□□□□ -1.47
SMARCD1-208ENST00000550280 hADV29S1A0JD25 119 aa5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 C20orf202A1L168 122 aa5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 KRTAP16-1A8MUX0 517 aa5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 COA6Q5JTJ3 125 aaKnown RBP5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
SMARCD1-208ENST00000550280 H3BUT2 72 aa5.82□□□□□ -1.48
SMARCD1-208ENST00000550280 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
SMARCD1-208ENST00000550280 LST1O00453 97 aa5.8□□□□□ -1.48
SMARCD1-208ENST00000550280 VAMP3Q15836 100 aa5.78□□□□□ -1.48
SMARCD1-208ENST00000550280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.78□□□□□ -1.48
SMARCD1-208ENST00000550280 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
SMARCD1-208ENST00000550280 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
SMARCD1-208ENST00000550280 SMCPP49901 116 aaPredicted RBP5.75□□□□□ -1.49
SMARCD1-208ENST00000550280 DSCR10P59022 87 aa5.75□□□□□ -1.49
SMARCD1-208ENST00000550280 PPDPFLQ8WWR9 84 aa5.75□□□□□ -1.49
SMARCD1-208ENST00000550280 TRBV20-1A0A075B6N2 111 aa5.74□□□□□ -1.49
SMARCD1-208ENST00000550280 HRES1P13985 223 aa5.74□□□□□ -1.49
SMARCD1-208ENST00000550280 C12orf57Q99622 126 aa5.74□□□□□ -1.49
SMARCD1-208ENST00000550280 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
SMARCD1-208ENST00000550280 A0A087WSZ3 146 aa5.72□□□□□ -1.49
SMARCD1-208ENST00000550280 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
SMARCD1-208ENST00000550280 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
SMARCD1-208ENST00000550280 TEN1Q86WV5 123 aa5.71□□□□□ -1.5
SMARCD1-208ENST00000550280 FAM218AQ96MZ4 157 aa5.71□□□□□ -1.5
SMARCD1-208ENST00000550280 SS18L2Q9UHA2 77 aa5.71□□□□□ -1.5
SMARCD1-208ENST00000550280 SCGB1D1O95968 90 aa5.7□□□□□ -1.5
SMARCD1-208ENST00000550280 SNRPEP62304 92 aaKnown RBP5.7□□□□□ -1.5
SMARCD1-208ENST00000550280 BVES-AS1Q5T3Y7 98 aa5.7□□□□□ -1.5
SMARCD1-208ENST00000550280 FAM236DA0A1B0GTK5 79 aa5.68□□□□□ -1.5
SMARCD1-208ENST00000550280 A0A1W2PNM2 257 aa5.68□□□□□ -1.5
SMARCD1-208ENST00000550280 FAM236CP0DP71 79 aa5.68□□□□□ -1.5
SMARCD1-208ENST00000550280 NDUFV3P56181 108 aaKnown RBP5.68□□□□□ -1.5
SMARCD1-208ENST00000550280 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SMARCD1-208ENST00000550280 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
SMARCD1-208ENST00000550280 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
SMARCD1-208ENST00000550280 HIST1H2BLQ99880 126 aa5.65□□□□□ -1.5
SMARCD1-208ENST00000550280 LINC00313P59037 77 aa5.64□□□□□ -1.51
SMARCD1-208ENST00000550280 H3BMG7 143 aa5.63□□□□□ -1.51
SMARCD1-208ENST00000550280 HIST1H4GQ99525 98 aa5.63□□□□□ -1.51
SMARCD1-208ENST00000550280 RBM12B-AS1Q9P1G2 102 aa5.62□□□□□ -1.51
SMARCD1-208ENST00000550280 IGKV4-1P06312 121 aa5.61□□□□□ -1.51
SMARCD1-208ENST00000550280 HSBP1L1C9JCN9 74 aa5.6□□□□□ -1.51
SMARCD1-208ENST00000550280 DEFB116Q30KQ4 102 aa5.6□□□□□ -1.51
SMARCD1-208ENST00000550280 H0YGX0 51 aa5.59□□□□□ -1.51
SMARCD1-208ENST00000550280 COX8AP10176 69 aa5.59□□□□□ -1.51
SMARCD1-208ENST00000550280 LINC00472Q9H8W2 130 aa5.59□□□□□ -1.51
SMARCD1-208ENST00000550280 A0A0B4J2C4 111 aa5.58□□□□□ -1.52
SMARCD1-208ENST00000550280 FABP2P12104 132 aa5.57□□□□□ -1.52
SMARCD1-208ENST00000550280 TRBV7-4A0A0J9YYF1 115 aa5.56□□□□□ -1.52
SMARCD1-208ENST00000550280 DLEU1O43261 78 aa5.56□□□□□ -1.52
SMARCD1-208ENST00000550280 RAB37Q96AX2 223 aa5.56□□□□□ -1.52
SMARCD1-208ENST00000550280 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
SMARCD1-208ENST00000550280 A0A1B0GV72 72 aa5.55□□□□□ -1.52
SMARCD1-208ENST00000550280 A0A1B0GX51 115 aa5.55□□□□□ -1.52
SMARCD1-208ENST00000550280 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
SMARCD1-208ENST00000550280 C2orf91Q6ZV80 131 aa5.55□□□□□ -1.52
SMARCD1-208ENST00000550280 S100A2P29034 98 aa5.54□□□□□ -1.52
SMARCD1-208ENST00000550280 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
SMARCD1-208ENST00000550280 TRIAP1O43715 76 aa5.53□□□□□ -1.52
SMARCD1-208ENST00000550280 SNCGO76070 127 aa5.52□□□□□ -1.53
SMARCD1-208ENST00000550280 SPINK7P58062 85 aa5.52□□□□□ -1.53
SMARCD1-208ENST00000550280 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
SMARCD1-208ENST00000550280 HIGD1BQ9P298 99 aa5.52□□□□□ -1.53
SMARCD1-208ENST00000550280 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
SMARCD1-208ENST00000550280 ZCCHC13Q8WW36 166 aaKnown RBP5.51□□□□□ -1.53
SMARCD1-208ENST00000550280 A0A1B0GVX0 72 aa5.5□□□□□ -1.53
SMARCD1-208ENST00000550280 FXYD2P54710 66 aa5.5□□□□□ -1.53
SMARCD1-208ENST00000550280 LINC00846Q9NV44 126 aa5.5□□□□□ -1.53
SMARCD1-208ENST00000550280 CCKP06307 115 aa5.49□□□□□ -1.53
SMARCD1-208ENST00000550280 PRO1854Q9UHT4 67 aa5.49□□□□□ -1.53
SMARCD1-208ENST00000550280 A8MWP4 228 aa5.48□□□□□ -1.53
SMARCD1-208ENST00000550280 CEND1Q8N111 149 aa5.48□□□□□ -1.53
SMARCD1-208ENST00000550280 NEBP20929 6669 aa5.47□□□□□ -1.53
SMARCD1-208ENST00000550280 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms