RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 APCP25054 2843 aa6.61□□□□□ -1.35
SMARCC2-209ENST00000550164 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
SMARCC2-209ENST00000550164 MOBPQ13875 183 aa6.59□□□□□ -1.35
SMARCC2-209ENST00000550164 A8MWP4 228 aa6.59□□□□□ -1.36
SMARCC2-209ENST00000550164 H3BPC8 53 aa6.59□□□□□ -1.36
SMARCC2-209ENST00000550164 TLX1NBP0CAT3 122 aa6.58□□□□□ -1.36
SMARCC2-209ENST00000550164 FAM229BQ4G0N7 80 aa6.58□□□□□ -1.36
SMARCC2-209ENST00000550164 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
SMARCC2-209ENST00000550164 SVEP1Q4LDE5 3571 aa6.58□□□□□ -1.36
SMARCC2-209ENST00000550164 DSCR10P59022 87 aa6.57□□□□□ -1.36
SMARCC2-209ENST00000550164 PRR15Q8IV56 129 aa6.57□□□□□ -1.36
SMARCC2-209ENST00000550164 TP53AIP1Q9HCN2 124 aa6.57□□□□□ -1.36
SMARCC2-209ENST00000550164 PLA2G2DQ9UNK4 145 aa6.56□□□□□ -1.36
SMARCC2-209ENST00000550164 COA5Q86WW8 74 aa6.55□□□□□ -1.36
SMARCC2-209ENST00000550164 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
SMARCC2-209ENST00000550164 NUPR2A6NF83 97 aa6.52□□□□□ -1.36
SMARCC2-209ENST00000550164 LY6G6CO95867 125 aa6.52□□□□□ -1.37
SMARCC2-209ENST00000550164 SPRR4Q96PI1 79 aa6.52□□□□□ -1.37
SMARCC2-209ENST00000550164 MDFIQ99750 246 aa6.52□□□□□ -1.37
SMARCC2-209ENST00000550164 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
SMARCC2-209ENST00000550164 NIPBLQ6KC79 2804 aaeCLIP6.51□□□□□ -1.376e-7■■■□□ 15
SMARCC2-209ENST00000550164 CUBNO60494 3623 aa6.49□□□□□ -1.37
SMARCC2-209ENST00000550164 SPINK1P00995 79 aa6.49□□□□□ -1.37
SMARCC2-209ENST00000550164 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
SMARCC2-209ENST00000550164 SPENQ96T58 3664 aaKnown RBP6.48□□□□□ -1.37
SMARCC2-209ENST00000550164 NBDYA0A0U1RRE5 68 aa6.48□□□□□ -1.37
SMARCC2-209ENST00000550164 IGKV2D-30A0A075B6S6 120 aa6.47□□□□□ -1.37
SMARCC2-209ENST00000550164 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
SMARCC2-209ENST00000550164 KRTAP26-1Q6PEX3 210 aa6.47□□□□□ -1.37
SMARCC2-209ENST00000550164 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
SMARCC2-209ENST00000550164 Q1T7F1 81 aa6.46□□□□□ -1.37
SMARCC2-209ENST00000550164 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.37
SMARCC2-209ENST00000550164 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.37
SMARCC2-209ENST00000550164 K7EIL1 84 aa6.46□□□□□ -1.38
SMARCC2-209ENST00000550164 ACYP2P14621 99 aa6.46□□□□□ -1.38
SMARCC2-209ENST00000550164 ANAPC11Q9NYG5 84 aa6.46□□□□□ -1.38
SMARCC2-209ENST00000550164 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
SMARCC2-209ENST00000550164 SPRR1AP35321 89 aa6.45□□□□□ -1.38
SMARCC2-209ENST00000550164 A0A1B0GU69 56 aa6.45□□□□□ -1.38
SMARCC2-209ENST00000550164 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
SMARCC2-209ENST00000550164 SPANXA2-OT1Q8N9U9 137 aa6.43□□□□□ -1.38
SMARCC2-209ENST00000550164 C1orf134Q5TEV5 83 aa6.43□□□□□ -1.38
SMARCC2-209ENST00000550164 A0A1B0GVX0 72 aa6.42□□□□□ -1.38
SMARCC2-209ENST00000550164 RTL8CO15255 209 aa6.42□□□□□ -1.38
SMARCC2-209ENST00000550164 CNBPP62633 177 aaKnown RBP6.41□□□□□ -1.38
SMARCC2-209ENST00000550164 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
SMARCC2-209ENST00000550164 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.38
SMARCC2-209ENST00000550164 ATP11AUNQ6ZP68 121 aa6.4□□□□□ -1.39
SMARCC2-209ENST00000550164 IGLV8-61A0A075B6I0 122 aa6.39□□□□□ -1.39
SMARCC2-209ENST00000550164 LINC00313P59037 77 aa6.39□□□□□ -1.39
SMARCC2-209ENST00000550164 TNP2Q05952 138 aa6.39□□□□□ -1.39
SMARCC2-209ENST00000550164 C7orf65Q6ZTY9 151 aa6.38□□□□□ -1.39
SMARCC2-209ENST00000550164 Q8N9P0 234 aaPredicted RBP6.37□□□□□ -1.39
SMARCC2-209ENST00000550164 K7ERS5 55 aa6.36□□□□□ -1.39
SMARCC2-209ENST00000550164 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
SMARCC2-209ENST00000550164 KRTAP4-16G5E9R7 235 aaPredicted RBP6.35□□□□□ -1.39
SMARCC2-209ENST00000550164 CD164Q04900 197 aa6.35□□□□□ -1.39
SMARCC2-209ENST00000550164 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
SMARCC2-209ENST00000550164 ZNF861PO60384 105 aa6.35□□□□□ -1.39
SMARCC2-209ENST00000550164 PSORS1C2Q9UIG4 136 aa6.35□□□□□ -1.39
SMARCC2-209ENST00000550164 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.4
SMARCC2-209ENST00000550164 IGLV7-46A0A075B6I9 117 aa6.33□□□□□ -1.4
SMARCC2-209ENST00000550164 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
SMARCC2-209ENST00000550164 KMT2BQ9UMN6 2715 aaPredicted RBP6.33□□□□□ -1.4
SMARCC2-209ENST00000550164 Q5VV11 94 aa6.33□□□□□ -1.4
SMARCC2-209ENST00000550164 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
SMARCC2-209ENST00000550164 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
SMARCC2-209ENST00000550164 A0A087WTM6 91 aa6.31□□□□□ -1.4
SMARCC2-209ENST00000550164 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
SMARCC2-209ENST00000550164 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
SMARCC2-209ENST00000550164 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
SMARCC2-209ENST00000550164 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
SMARCC2-209ENST00000550164 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
SMARCC2-209ENST00000550164 Q75L30 129 aa6.27□□□□□ -1.4
SMARCC2-209ENST00000550164 UQCR11O14957 56 aa6.27□□□□□ -1.41
SMARCC2-209ENST00000550164 Q96NJ1 140 aa6.27□□□□□ -1.41
SMARCC2-209ENST00000550164 SPRR1BP22528 89 aa6.26□□□□□ -1.41
SMARCC2-209ENST00000550164 SSBP3-AS1Q7Z2R9 100 aa6.26□□□□□ -1.41
SMARCC2-209ENST00000550164 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
SMARCC2-209ENST00000550164 VWFP04275 2813 aa6.25□□□□□ -1.41
SMARCC2-209ENST00000550164 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
SMARCC2-209ENST00000550164 MIR22HGQ0VDD5 57 aa6.25□□□□□ -1.41
SMARCC2-209ENST00000550164 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
SMARCC2-209ENST00000550164 IGLV7-43P04211 117 aa6.24□□□□□ -1.41
SMARCC2-209ENST00000550164 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
SMARCC2-209ENST00000550164 HRES1P13985 223 aa6.23□□□□□ -1.41
SMARCC2-209ENST00000550164 LINC01558Q9Y6Z2 57 aa6.23□□□□□ -1.41
SMARCC2-209ENST00000550164 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
SMARCC2-209ENST00000550164 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
SMARCC2-209ENST00000550164 LCE6AA0A183 80 aa6.21□□□□□ -1.41
SMARCC2-209ENST00000550164 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
SMARCC2-209ENST00000550164 SPINK7P58062 85 aa6.21□□□□□ -1.42
SMARCC2-209ENST00000550164 LCA10Q71F78 164 aa6.21□□□□□ -1.42
SMARCC2-209ENST00000550164 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
SMARCC2-209ENST00000550164 PANO1I0J062 215 aa6.19□□□□□ -1.42
SMARCC2-209ENST00000550164 BSNQ9UPA5 3926 aa6.18□□□□□ -1.42
SMARCC2-209ENST00000550164 A8MU10 97 aa6.18□□□□□ -1.42
SMARCC2-209ENST00000550164 Q8N1X5 172 aa6.16□□□□□ -1.42
SMARCC2-209ENST00000550164 WWC2-AS2Q96NR7 200 aa6.15□□□□□ -1.42
SMARCC2-209ENST00000550164 PDZD2O15018 2839 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms