RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
LINC00661-204ENST00000549354 BCE1O60756 84 aa7.06□□□□□ -1.28
LINC00661-204ENST00000549354 KRTAP1-5Q9BYS1 174 aa7.06□□□□□ -1.28
LINC00661-204ENST00000549354 FBN3Q75N90 2809 aa7.05□□□□□ -1.28
LINC00661-204ENST00000549354 MRPL55Q7Z7F7 128 aaKnown RBP7.05□□□□□ -1.28
LINC00661-204ENST00000549354 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
LINC00661-204ENST00000549354 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
LINC00661-204ENST00000549354 V9GYY9 64 aa7.05□□□□□ -1.28
LINC00661-204ENST00000549354 NDUFC1O43677 76 aa7.04□□□□□ -1.28
LINC00661-204ENST00000549354 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
LINC00661-204ENST00000549354 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
LINC00661-204ENST00000549354 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
LINC00661-204ENST00000549354 IGLV1-50A0A075B6I6 118 aa7.02□□□□□ -1.29
LINC00661-204ENST00000549354 ANAPC11Q9NYG5 84 aa7.02□□□□□ -1.29
LINC00661-204ENST00000549354 IGLV5-48A0A075B6I7 105 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 IGLV9-49A0A0B4J1Y8 123 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 DSCR10P59022 87 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 DHRS4-AS1Q9P1J3 65 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
LINC00661-204ENST00000549354 Q8NBF4 154 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 PRO0628Q9UI54 55 aa7.01□□□□□ -1.29
LINC00661-204ENST00000549354 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
LINC00661-204ENST00000549354 PSPHP1O15172 72 aa7□□□□□ -1.29
LINC00661-204ENST00000549354 H0Y9J4 135 aa6.99□□□□□ -1.29
LINC00661-204ENST00000549354 REG3GQ6UW15 175 aa6.99□□□□□ -1.29
LINC00661-204ENST00000549354 UBE2AP49459 152 aa6.99□□□□□ -1.29
LINC00661-204ENST00000549354 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
LINC00661-204ENST00000549354 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
LINC00661-204ENST00000549354 DNHD1Q96M86 4753 aa6.98□□□□□ -1.29
LINC00661-204ENST00000549354 NBDYA0A0U1RRE5 68 aa6.98□□□□□ -1.29
LINC00661-204ENST00000549354 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
LINC00661-204ENST00000549354 KRTAP4-16G5E9R7 235 aaPredicted RBP6.97□□□□□ -1.29
LINC00661-204ENST00000549354 C1orf64Q8NEQ6 169 aa6.96□□□□□ -1.29
LINC00661-204ENST00000549354 LINC00208Q96KT6 92 aa6.96□□□□□ -1.3
LINC00661-204ENST00000549354 Q6ZRN7 208 aaPredicted RBP6.96□□□□□ -1.3
LINC00661-204ENST00000549354 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
LINC00661-204ENST00000549354 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
LINC00661-204ENST00000549354 IGFL1Q6UW32 110 aa6.95□□□□□ -1.3
LINC00661-204ENST00000549354 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
LINC00661-204ENST00000549354 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
LINC00661-204ENST00000549354 TNP2Q05952 138 aa6.94□□□□□ -1.3
LINC00661-204ENST00000549354 NDUFS5O43920 106 aa6.94□□□□□ -1.3
LINC00661-204ENST00000549354 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
LINC00661-204ENST00000549354 PANO1I0J062 215 aa6.94□□□□□ -1.3
LINC00661-204ENST00000549354 SPINK6Q6UWN8 80 aa6.93□□□□□ -1.3
LINC00661-204ENST00000549354 PCOTHQ58A44 107 aa6.92□□□□□ -1.3
LINC00661-204ENST00000549354 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
LINC00661-204ENST00000549354 SPRR1AP35321 89 aa6.91□□□□□ -1.3
LINC00661-204ENST00000549354 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
LINC00661-204ENST00000549354 SPRR4Q96PI1 79 aa6.9□□□□□ -1.3
LINC00661-204ENST00000549354 hDV103S1A0JD37 113 aa6.9□□□□□ -1.31
LINC00661-204ENST00000549354 Q6ZR54 194 aa6.9□□□□□ -1.31
LINC00661-204ENST00000549354 C9orf163Q8N9P6 203 aa6.88□□□□□ -1.31
LINC00661-204ENST00000549354 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
LINC00661-204ENST00000549354 A8MU10 97 aa6.87□□□□□ -1.31
LINC00661-204ENST00000549354 MP68P56378 58 aa6.86□□□□□ -1.31
LINC00661-204ENST00000549354 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
LINC00661-204ENST00000549354 A8MUN3 132 aa6.85□□□□□ -1.31
LINC00661-204ENST00000549354 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
LINC00661-204ENST00000549354 CASC2Q6XLA1 102 aa6.84□□□□□ -1.31
LINC00661-204ENST00000549354 TRAV22A0A0B4J277 110 aa6.84□□□□□ -1.31
LINC00661-204ENST00000549354 H0Y9P7 68 aa6.83□□□□□ -1.32
LINC00661-204ENST00000549354 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
LINC00661-204ENST00000549354 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
LINC00661-204ENST00000549354 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
LINC00661-204ENST00000549354 A0A087WTM6 91 aa6.83□□□□□ -1.32
LINC00661-204ENST00000549354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
LINC00661-204ENST00000549354 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
LINC00661-204ENST00000549354 LCE6AA0A183 80 aa6.79□□□□□ -1.32
LINC00661-204ENST00000549354 A0A1B0GW54 56 aa6.79□□□□□ -1.32
LINC00661-204ENST00000549354 SPTSSBQ8NFR3 76 aa6.79□□□□□ -1.32
LINC00661-204ENST00000549354 H3BS24 57 aa6.78□□□□□ -1.32
LINC00661-204ENST00000549354 MOBPQ13875 183 aa6.78□□□□□ -1.32
LINC00661-204ENST00000549354 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
LINC00661-204ENST00000549354 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
LINC00661-204ENST00000549354 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
LINC00661-204ENST00000549354 C1orf134Q5TEV5 83 aa6.77□□□□□ -1.33
LINC00661-204ENST00000549354 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.33
LINC00661-204ENST00000549354 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
LINC00661-204ENST00000549354 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
LINC00661-204ENST00000549354 DNAH2Q9P225 4427 aa6.76□□□□□ -1.33
LINC00661-204ENST00000549354 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
LINC00661-204ENST00000549354 NDUFB1O75438 58 aa6.75□□□□□ -1.33
LINC00661-204ENST00000549354 DNAH17Q9UFH2 4485 aa6.74□□□□□ -1.33
LINC00661-204ENST00000549354 Q1T7F1 81 aa6.74□□□□□ -1.33
LINC00661-204ENST00000549354 KRTAP29-1A8MX34 341 aaPredicted RBP6.74□□□□□ -1.33
LINC00661-204ENST00000549354 RTL8CO15255 209 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 LY6G6CO95867 125 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 A8MWP4 228 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 HECTD4Q9Y4D8 3996 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 A0A087X002 238 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
LINC00661-204ENST00000549354 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
LINC00661-204ENST00000549354 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
LINC00661-204ENST00000549354 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
LINC00661-204ENST00000549354 CYP4F30PQ9H0H9 118 aa6.71□□□□□ -1.34
LINC00661-204ENST00000549354 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
LINC00661-204ENST00000549354 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
LINC00661-204ENST00000549354 DMBT1Q9UGM3 2413 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms