RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 H3BNG1 76 aa9.12□□□□□ -0.95
CACNB3-209ENST00000548860 NDUFB1O75438 58 aa9.09□□□□□ -0.95
CACNB3-209ENST00000548860 EPM2AB3EWF7 344 aa9.09□□□□□ -0.95
CACNB3-209ENST00000548860 KRTAP26-1Q6PEX3 210 aa9.09□□□□□ -0.95
CACNB3-209ENST00000548860 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
CACNB3-209ENST00000548860 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
CACNB3-209ENST00000548860 PMAIP1Q13794 54 aa9.06□□□□□ -0.96
CACNB3-209ENST00000548860 IGFL1Q6UW32 110 aa9.06□□□□□ -0.96
CACNB3-209ENST00000548860 NDUFC1O43677 76 aa9.06□□□□□ -0.96
CACNB3-209ENST00000548860 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
CACNB3-209ENST00000548860 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
CACNB3-209ENST00000548860 MDFIQ99750 246 aa9.05□□□□□ -0.96
CACNB3-209ENST00000548860 LY6G6CO95867 125 aa9.05□□□□□ -0.96
CACNB3-209ENST00000548860 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
CACNB3-209ENST00000548860 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
CACNB3-209ENST00000548860 KLKP1Q107X0 134 aa9.02□□□□□ -0.97
CACNB3-209ENST00000548860 C14orf177Q52M58 125 aa9.01□□□□□ -0.97
CACNB3-209ENST00000548860 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
CACNB3-209ENST00000548860 H0Y9P7 68 aa9.01□□□□□ -0.97
CACNB3-209ENST00000548860 TGP01266 2768 aa9□□□□□ -0.97
CACNB3-209ENST00000548860 COL7A1Q02388 2944 aa9□□□□□ -0.97
CACNB3-209ENST00000548860 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
CACNB3-209ENST00000548860 FAM229BQ4G0N7 80 aa8.98□□□□□ -0.97
CACNB3-209ENST00000548860 MOBPQ13875 183 aa8.97□□□□□ -0.97
CACNB3-209ENST00000548860 DSCR10P59022 87 aa8.97□□□□□ -0.97
CACNB3-209ENST00000548860 IGLV5-48A0A075B6I7 105 aa8.95□□□□□ -0.98
CACNB3-209ENST00000548860 OCR1Q9BZK8 76 aa8.95□□□□□ -0.98
CACNB3-209ENST00000548860 ANK2Q01484 3957 aa8.95□□□□□ -0.98
CACNB3-209ENST00000548860 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
CACNB3-209ENST00000548860 FP248Q71RG6 208 aaPredicted RBP8.93□□□□□ -0.98
CACNB3-209ENST00000548860 KRTAP7-1Q8IUC3 87 aa8.93□□□□□ -0.98
CACNB3-209ENST00000548860 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
CACNB3-209ENST00000548860 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
CACNB3-209ENST00000548860 TLX1NBP0CAT3 122 aa8.9□□□□□ -0.99
CACNB3-209ENST00000548860 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
CACNB3-209ENST00000548860 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
CACNB3-209ENST00000548860 PANO1I0J062 215 aa8.89□□□□□ -0.99
CACNB3-209ENST00000548860 PRR15LQ9BU68 103 aa8.89□□□□□ -0.99
CACNB3-209ENST00000548860 IGLV5-52A0A0A0MRZ9 124 aa8.88□□□□□ -0.99
CACNB3-209ENST00000548860 BCE1O60756 84 aa8.88□□□□□ -0.99
CACNB3-209ENST00000548860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.86□□□□□ -0.99
CACNB3-209ENST00000548860 A8MUN3 132 aa8.86□□□□□ -0.99
CACNB3-209ENST00000548860 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
CACNB3-209ENST00000548860 A6NED7 52 aa8.84□□□□□ -0.99
CACNB3-209ENST00000548860 NUPR2A6NF83 97 aa8.83□□□□□ -1
CACNB3-209ENST00000548860 C9orf163Q8N9P6 203 aa8.83□□□□□ -1
CACNB3-209ENST00000548860 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
CACNB3-209ENST00000548860 APLNQ9ULZ1 77 aa8.83□□□□□ -1
CACNB3-209ENST00000548860 RTL8CO15255 209 aa8.82□□□□□ -1
CACNB3-209ENST00000548860 PRR15Q8IV56 129 aa8.82□□□□□ -1
CACNB3-209ENST00000548860 SPRR1AP35321 89 aa8.82□□□□□ -1
CACNB3-209ENST00000548860 SPAG11AQ6PDA7 123 aa8.82□□□□□ -1
CACNB3-209ENST00000548860 PLA2G2DQ9UNK4 145 aa8.81□□□□□ -1
CACNB3-209ENST00000548860 KRTAP4-16G5E9R7 235 aaPredicted RBP8.81□□□□□ -1
CACNB3-209ENST00000548860 SPRR4Q96PI1 79 aa8.79□□□□□ -1
CACNB3-209ENST00000548860 A8MWP4 228 aa8.78□□□□□ -1
CACNB3-209ENST00000548860 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1
CACNB3-209ENST00000548860 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
CACNB3-209ENST00000548860 CD164Q04900 197 aa8.77□□□□□ -1.01
CACNB3-209ENST00000548860 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
CACNB3-209ENST00000548860 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
CACNB3-209ENST00000548860 TNP2Q05952 138 aa8.75□□□□□ -1.01
CACNB3-209ENST00000548860 A0A087WTM6 91 aa8.74□□□□□ -1.01
CACNB3-209ENST00000548860 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
CACNB3-209ENST00000548860 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
CACNB3-209ENST00000548860 SPINK1P00995 79 aa8.72□□□□□ -1.01
CACNB3-209ENST00000548860 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.01
CACNB3-209ENST00000548860 FBN3Q75N90 2809 aa8.71□□□□□ -1.02
CACNB3-209ENST00000548860 LYSTQ99698 3801 aa8.7□□□□□ -1.02
CACNB3-209ENST00000548860 A0A1B0GW54 56 aa8.69□□□□□ -1.02
CACNB3-209ENST00000548860 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
CACNB3-209ENST00000548860 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
CACNB3-209ENST00000548860 C8orf17Q9NRJ1 99 aa8.67□□□□□ -1.02
CACNB3-209ENST00000548860 COA5Q86WW8 74 aa8.66□□□□□ -1.02
CACNB3-209ENST00000548860 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
CACNB3-209ENST00000548860 DNAH10Q8IVF4 4471 aa8.64□□□□□ -1.03
CACNB3-209ENST00000548860 H3BS24 57 aa8.64□□□□□ -1.03
CACNB3-209ENST00000548860 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
CACNB3-209ENST00000548860 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
CACNB3-209ENST00000548860 FLG2Q5D862 2391 aaPredicted RBP8.63□□□□□ -1.03
CACNB3-209ENST00000548860 ZNF861PO60384 105 aa8.62□□□□□ -1.03
CACNB3-209ENST00000548860 A0A087X002 238 aa8.62□□□□□ -1.03
CACNB3-209ENST00000548860 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
CACNB3-209ENST00000548860 PRR26Q8N8Z3 221 aa8.61□□□□□ -1.03
CACNB3-209ENST00000548860 LINC00472Q9H8W2 130 aa8.61□□□□□ -1.03
CACNB3-209ENST00000548860 A8MU10 97 aa8.61□□□□□ -1.03
CACNB3-209ENST00000548860 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
CACNB3-209ENST00000548860 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
CACNB3-209ENST00000548860 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
CACNB3-209ENST00000548860 SMR3BP02814 79 aaPredicted RBP8.58□□□□□ -1.04
CACNB3-209ENST00000548860 CMYA5Q8N3K9 4069 aa8.58□□□□□ -1.04
CACNB3-209ENST00000548860 HUWE1Q7Z6Z7 4374 aaKnown RBP8.56□□□□□ -1.04
CACNB3-209ENST00000548860 KTN1-AS1Q86SY8 53 aa8.54□□□□□ -1.04
CACNB3-209ENST00000548860 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
CACNB3-209ENST00000548860 LINC00313P59037 77 aa8.52□□□□□ -1.05
CACNB3-209ENST00000548860 Q8N9P0 234 aaPredicted RBP8.52□□□□□ -1.05
CACNB3-209ENST00000548860 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.05
CACNB3-209ENST00000548860 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
CACNB3-209ENST00000548860 KRTAP29-1A8MX34 341 aaPredicted RBP8.5□□□□□ -1.05
CACNB3-209ENST00000548860 PLA2G1BP04054 148 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms