RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PKHD1L1Q86WI1 4243 aa1.66□□□□□ -2.14
PTCH1-216ENST00000548379 IGKV2D-26A0A0A0MRZ7 120 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 TRBV6-5A0A0K0K1A5 114 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 TRBV30A0A0K0K1B3 111 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 A0A1B0GVG6 124 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 KANTRA0A1W2PQU2 76 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 TMEM256-PLSCR3K7ERE1 68 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 CKS1BP61024 79 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 HBBP68871 147 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 TPRXLQ17RH7 258 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 CNFNQ9BYD5 112 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 SPANXA1Q9NS26 97 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
PTCH1-216ENST00000548379 TRBV27A0A0K0K1C4 114 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 BCE1O60756 84 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 HINT1P49773 126 aaPredicted RBP1.64□□□□□ -2.15
PTCH1-216ENST00000548379 Q5BKY6 102 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 UNQ6190/PRO20217Q6UXQ8 127 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 TIMM21Q9BVV7 248 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 TMEM126AQ9H061 195 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 C6orf48Q9UBA6 75 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 CRCT1Q9UGL9 99 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 UBE2D4Q9Y2X8 147 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 TNXBP22105 4242 aa1.64□□□□□ -2.15
PTCH1-216ENST00000548379 MUC2Q02817 5179 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 A0A1B0GUT8 65 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 ZNF727A8MUV8 499 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 IFI27P40305 119 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-216ENST00000548379 POLR2KP53803 58 aaKnown RBP1.63□□□□□ -2.15
PTCH1-216ENST00000548379 FOXA3P55318 350 aaPredicted RBP1.63□□□□□ -2.15
PTCH1-216ENST00000548379 TMEM258P61165 79 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
PTCH1-216ENST00000548379 ZNF345Q14585 488 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 NDUFA5Q16718 116 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 SPAG11AQ6PDA7 123 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 Q6ZUT4 128 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 RETNLBQ9BQ08 111 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 C2orf88Q9BSF0 95 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 TMEM191AQ9H0A3 160 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 NDUFA12Q9UI09 145 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 LAMTOR2Q9Y2Q5 125 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 C22orf24Q9Y442 160 aa1.63□□□□□ -2.15
PTCH1-216ENST00000548379 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 HMSDA8MTL9 139 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 HIGD1CA8MV81 97 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 S100A8P05109 93 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 CKS2P33552 79 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 MRPS36P82909 103 aaKnown RBP1.62□□□□□ -2.15
PTCH1-216ENST00000548379 Q6ZQT0 140 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 FP248Q71RG6 208 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-216ENST00000548379 PRR15Q8IV56 129 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 C20orf78Q9BR46 151 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 TOMM7Q9P0U1 55 aa1.62□□□□□ -2.15
PTCH1-216ENST00000548379 F8VRH5 84 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 F8W036 122 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 SEC11AP67812 179 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 C2orf82Q6UX34 121 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 SOSTDC1Q6X4U4 206 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 Q8IZM0 81 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 TMEM141Q96I45 108 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 NHP2Q9NX24 153 aaKnown RBP1.61□□□□□ -2.15
PTCH1-216ENST00000548379 SPANXCQ9NY87 97 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 NAT8BQ9UHF3 227 aa1.61□□□□□ -2.15
PTCH1-216ENST00000548379 LPAP08519 4548 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 A0A1B0GX51 115 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 J3KT08 172 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 J3QQQ9 107 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 RPL39P62891 51 aaKnown RBP1.6□□□□□ -2.15
PTCH1-216ENST00000548379 ASB16-AS1Q495Z4 193 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 PCOTHQ58A44 107 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 HRCT1Q6UXD1 115 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 FAM19A2Q8N3H0 131 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 SMIM7Q9BQ49 75 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 SMIM2Q9BVW6 85 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 FAT4Q6V0I7 4981 aa1.6□□□□□ -2.15
PTCH1-216ENST00000548379 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 D6R8Y8 96 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 M0R2T5 61 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 SPINK1P00995 79 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 PRLHP81277 87 aa1.59□□□□□ -2.15
PTCH1-216ENST00000548379 TIMM17BO60830 172 aa1.58□□□□□ -2.16
PTCH1-216ENST00000548379 COX7B2Q8TF08 81 aa1.58□□□□□ -2.16
PTCH1-216ENST00000548379 PRELID3AQ96N28 172 aa1.58□□□□□ -2.16
PTCH1-216ENST00000548379 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 LINC01549A6NIU2 74 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 H3BRM9 83 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 K7EMI3 77 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 K7ERJ3 54 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 HIST1H2BKO60814 126 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 HIST1H2BJP06899 126 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 NDUFA6P56556 154 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 RPS29P62273 56 aaKnown RBP1.57□□□□□ -2.16
PTCH1-216ENST00000548379 ADIRFQ15847 76 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 MRPL54Q6P161 138 aaKnown RBP1.57□□□□□ -2.16
PTCH1-216ENST00000548379 SFTA2Q6UW10 78 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 COX6B2Q6YFQ2 88 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 CDKN2A-AS1Q9UH64 79 aa1.57□□□□□ -2.16
PTCH1-216ENST00000548379 V9GYV3 84 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms