RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ENKURQ8TC29 256 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 BORCS7Q96B45 105 aa0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 SYNE1Q8NF91 8797 aaKnown RBP0.82□□□□□ -2.28
DEPDC4-204ENST00000547823 A0A1B0GUT8 65 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 A0A1B0GV50 99 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 TINCRA0A1B0GVN0 87 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 LINC00862A6NCI5 91 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 IGIPA6NJ69 53 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 DDTP30046 118 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 CKS2P33552 79 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 H2BFSP57053 126 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 ZNF345Q14585 488 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 KRTAP20-2Q3LI61 65 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 H1FX-AS1Q4G0G2 97 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 MRPL51Q4U2R6 128 aaKnown RBP0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 RPL7L1Q6DKI1 246 aaKnown RBP0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 KCNRGQ8N5I3 272 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 CYSLTR1Q9Y271 337 aa0.81□□□□□ -2.28
DEPDC4-204ENST00000547823 TRAV23DV6A0A075B6W5 121 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 HIGD1CA8MV81 97 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 K7EN84 100 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 PLA2G10O15496 165 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 LYRM1O43325 122 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 GATCO43716 136 aaKnown RBP0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 NPYP01303 97 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 SPINK7P58062 85 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 LINC00158P58513 81 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 PMVKQ15126 192 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 TAL2Q16559 108 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 FAM104BQ5XKR9 115 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 LINC00299Q6ZSB3 139 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 WFDC13Q8IUB5 93 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 DEFB105AQ8NG35 78 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 SFT2D1Q8WV19 159 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 MBD3L1Q8WWY6 194 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 CYSTM1Q9H1C7 97 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 R4GN34 69 aa0.8□□□□□ -2.28
DEPDC4-204ENST00000547823 TRBV7-7A0A0K0K1E9 115 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 TRBV10-2A0A0K0K1G8 114 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 TEX49A0A1B0GTD5 131 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 HMSDA8MTL9 139 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 H3BRM9 83 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 LST1O00453 97 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 ZNF73O43830 326 aaPredicted RBP0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 IL7P13232 177 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 S100A5P33763 92 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 KLKP1Q107X0 134 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 LUZP6Q538Z0 58 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 SOSTDC1Q6X4U4 206 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 FA2HQ7L5A8 372 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 FAM213BQ8TBF2 198 aa0.79□□□□□ -2.28
DEPDC4-204ENST00000547823 A6NDN8 102 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 SMIM13P0DJ93 91 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 HINT1P49773 126 aaPredicted RBP0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 LINC00313P59037 77 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 Q5BKY6 102 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 SFTA2Q6UW10 78 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 MANBALQ9NQG1 85 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 GNG13Q9P2W3 67 aa0.78□□□□□ -2.28
DEPDC4-204ENST00000547823 IGLV5-48A0A075B6I7 105 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 PDE6DO43924 150 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 PPBPP02775 128 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 ZNF22P17026 224 aaPredicted RBP0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 S100A7L2Q5SY68 101 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 LCA10Q71F78 164 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 Q8N8P6 123 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 PRELID3AQ96N28 172 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 CST9LQ9H4G1 147 aa0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 SPANXB1Q9NS25 103 aaPredicted RBP0.77□□□□□ -2.29
DEPDC4-204ENST00000547823 UMAD1C9J7I0 102 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 K7EMI3 77 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 SSNA1O43805 119 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 IGLC3P0DOY3 106 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 ADCYAP1P18509 176 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 COX7BP24311 80 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 ELOF1P60002 83 aaKnown RBP0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 MEIG1Q5JSS6 88 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 PRR15Q8IV56 129 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 ORMDL3Q8N138 153 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 CLEC2BQ92478 149 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 TOMM6Q96B49 74 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 SCGB3A1Q96QR1 104 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 MAP1LC3AQ9H492 121 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 NXT2Q9NPJ8 142 aaKnown RBP0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 CRIPTQ9P021 101 aa0.76□□□□□ -2.29
DEPDC4-204ENST00000547823 A0A1B0GW15 77 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 ZNF815PA8K554 130 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 F8W036 122 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 F8WEM9 126 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 H0Y8G0 127 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 NDUFC2O95298 119 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 MT1EP04732 61 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 G0S2P27469 103 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 IFITM3Q01628 133 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 KRTAP19-7Q3SYF9 63 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 Q6JHZ5 121 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 PLAC4Q8WY50 150 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 OSTCQ9NRP0 149 aa0.75□□□□□ -2.29
DEPDC4-204ENST00000547823 SS18L2Q9UHA2 77 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms