RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
CHMP1A-204ENST00000547687 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
CHMP1A-204ENST00000547687 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
CHMP1A-204ENST00000547687 Q8N377 158 aa10.42□□□□□ -0.74
CHMP1A-204ENST00000547687 KRTAP4-5Q9BYR2 181 aa10.42□□□□□ -0.74
CHMP1A-204ENST00000547687 LINC01547P58512 204 aaPredicted RBP10.4□□□□□ -0.75
CHMP1A-204ENST00000547687 UBE2BP63146 152 aa10.38□□□□□ -0.75
CHMP1A-204ENST00000547687 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
CHMP1A-204ENST00000547687 KRTAP10-1P60331 282 aa10.38□□□□□ -0.75
CHMP1A-204ENST00000547687 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
CHMP1A-204ENST00000547687 PKIGQ9Y2B9 76 aa10.38□□□□□ -0.75
CHMP1A-204ENST00000547687 ERC2-IT1O76042 136 aa10.36□□□□□ -0.75
CHMP1A-204ENST00000547687 CRYGAP11844 174 aa10.36□□□□□ -0.75
CHMP1A-204ENST00000547687 ST20-AS1Q8NBB2 130 aa10.36□□□□□ -0.75
CHMP1A-204ENST00000547687 PANO1I0J062 215 aa10.36□□□□□ -0.75
CHMP1A-204ENST00000547687 FAT1Q14517 4588 aa10.36□□□□□ -0.75
CHMP1A-204ENST00000547687 HAMPP81172 84 aa10.35□□□□□ -0.75
CHMP1A-204ENST00000547687 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
CHMP1A-204ENST00000547687 Q6ZVQ6 151 aa10.34□□□□□ -0.75
CHMP1A-204ENST00000547687 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
CHMP1A-204ENST00000547687 HIST1H4AP62805 103 aaKnown RBP10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 LINC00474Q9P2X8 69 aa10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 DNAH8Q96JB1 4490 aa10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 FAM19A1Q7Z5A9 133 aa10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
CHMP1A-204ENST00000547687 A0A087WVE0 104 aa10.32□□□□□ -0.76
CHMP1A-204ENST00000547687 COX7CP15954 63 aa10.31□□□□□ -0.76
CHMP1A-204ENST00000547687 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
CHMP1A-204ENST00000547687 PRO0628Q9UI54 55 aa10.31□□□□□ -0.76
CHMP1A-204ENST00000547687 TMEM258P61165 79 aa10.31□□□□□ -0.76
CHMP1A-204ENST00000547687 Q5XG85 94 aa10.3□□□□□ -0.76
CHMP1A-204ENST00000547687 SPACA4Q8TDM5 124 aa10.3□□□□□ -0.76
CHMP1A-204ENST00000547687 PRLHP81277 87 aa10.29□□□□□ -0.76
CHMP1A-204ENST00000547687 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
CHMP1A-204ENST00000547687 ATOX1O00244 68 aa10.27□□□□□ -0.77
CHMP1A-204ENST00000547687 C4orf26Q17RF5 130 aa10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 Q8N1X5 172 aa10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 FAM30AQ9NZY2 134 aa10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 SMR3BP02814 79 aaPredicted RBP10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 HIGD2AQ9BW72 106 aa10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 SRRM2Q9UQ35 2752 aaKnown RBP10.26□□□□□ -0.77
CHMP1A-204ENST00000547687 SEC61GP60059 68 aa10.25□□□□□ -0.77
CHMP1A-204ENST00000547687 CXCL6P80162 114 aa10.25□□□□□ -0.77
CHMP1A-204ENST00000547687 C1orf137Q5JT78 98 aa10.25□□□□□ -0.77
CHMP1A-204ENST00000547687 HRCT1Q6UXD1 115 aa10.25□□□□□ -0.77
CHMP1A-204ENST00000547687 SMIM29Q86T20 159 aa10.24□□□□□ -0.77
CHMP1A-204ENST00000547687 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
CHMP1A-204ENST00000547687 EPM2AB3EWF7 344 aa10.23□□□□□ -0.77
CHMP1A-204ENST00000547687 H0Y9J4 135 aa10.23□□□□□ -0.77
CHMP1A-204ENST00000547687 NREPQ16612 68 aa10.22□□□□□ -0.77
CHMP1A-204ENST00000547687 A0A1W2PNM2 257 aa10.21□□□□□ -0.77
CHMP1A-204ENST00000547687 OXTP01178 125 aa10.21□□□□□ -0.77
CHMP1A-204ENST00000547687 A0A1B0GW54 56 aa10.21□□□□□ -0.78
CHMP1A-204ENST00000547687 F8WEM9 126 aa10.21□□□□□ -0.78
CHMP1A-204ENST00000547687 SCXQ7RTU7 201 aa10.2□□□□□ -0.78
CHMP1A-204ENST00000547687 UBE2AP49459 152 aa10.19□□□□□ -0.78
CHMP1A-204ENST00000547687 Q8NBF4 154 aa10.19□□□□□ -0.78
CHMP1A-204ENST00000547687 PLAC8Q9NZF1 115 aa10.18□□□□□ -0.78
CHMP1A-204ENST00000547687 BCE1O60756 84 aa10.17□□□□□ -0.78
CHMP1A-204ENST00000547687 Q5VSD8 79 aa10.17□□□□□ -0.78
CHMP1A-204ENST00000547687 MYCBP2O75592 4640 aa10.16□□□□□ -0.78
CHMP1A-204ENST00000547687 FLG2Q5D862 2391 aaPredicted RBP10.16□□□□□ -0.78
CHMP1A-204ENST00000547687 SPRR4Q96PI1 79 aa10.16□□□□□ -0.78
CHMP1A-204ENST00000547687 SERP2Q8N6R1 65 aa10.15□□□□□ -0.78
CHMP1A-204ENST00000547687 V9GYY9 64 aa10.14□□□□□ -0.79
CHMP1A-204ENST00000547687 Q6ZSA8 131 aa10.14□□□□□ -0.79
CHMP1A-204ENST00000547687 IGLV8-61A0A075B6I0 122 aa10.13□□□□□ -0.79
CHMP1A-204ENST00000547687 BPY2O14599 106 aa10.13□□□□□ -0.79
CHMP1A-204ENST00000547687 SPRR1BP22528 89 aa10.13□□□□□ -0.79
CHMP1A-204ENST00000547687 IGFL1Q6UW32 110 aa10.12□□□□□ -0.79
CHMP1A-204ENST00000547687 KRTAP13-1Q8IUC0 172 aa10.12□□□□□ -0.79
CHMP1A-204ENST00000547687 A0A0G2JQZ4 141 aa10.11□□□□□ -0.79
CHMP1A-204ENST00000547687 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
CHMP1A-204ENST00000547687 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
CHMP1A-204ENST00000547687 Q8N9L7 120 aa10.09□□□□□ -0.79
CHMP1A-204ENST00000547687 FAM229AH3BQW9 127 aa10.07□□□□□ -0.8
CHMP1A-204ENST00000547687 IGKV4-1P06312 121 aa10.07□□□□□ -0.8
CHMP1A-204ENST00000547687 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
CHMP1A-204ENST00000547687 HERC1Q15751 4861 aa10.06□□□□□ -0.8
CHMP1A-204ENST00000547687 DMBT1Q9UGM3 2413 aaPredicted RBP10.03□□□□□ -0.8
CHMP1A-204ENST00000547687 TRAV7A0A075B6U4 112 aa10.02□□□□□ -0.8
CHMP1A-204ENST00000547687 A0A087WSZ3 146 aa10□□□□□ -0.81
CHMP1A-204ENST00000547687 C1orf195Q5TG92 126 aa10□□□□□ -0.81
CHMP1A-204ENST00000547687 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
CHMP1A-204ENST00000547687 LRP1Q07954 4544 aaKnown RBP9.99□□□□□ -0.81
CHMP1A-204ENST00000547687 DSCR10P59022 87 aa9.98□□□□□ -0.81
CHMP1A-204ENST00000547687 ZNF861PO60384 105 aa9.97□□□□□ -0.81
CHMP1A-204ENST00000547687 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
CHMP1A-204ENST00000547687 ZNF706Q9Y5V0 76 aaPredicted RBP9.97□□□□□ -0.81
CHMP1A-204ENST00000547687 FAM236DA0A1B0GTK5 79 aa9.96□□□□□ -0.81
CHMP1A-204ENST00000547687 FAM236CP0DP71 79 aa9.96□□□□□ -0.81
CHMP1A-204ENST00000547687 LINC00483Q53H64 154 aa9.96□□□□□ -0.81
CHMP1A-204ENST00000547687 KRTAP10-4P60372 401 aaPredicted RBP9.95□□□□□ -0.82
CHMP1A-204ENST00000547687 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
CHMP1A-204ENST00000547687 IGLV9-49A0A0B4J1Y8 123 aa9.94□□□□□ -0.82
CHMP1A-204ENST00000547687 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
CHMP1A-204ENST00000547687 DEFB116Q30KQ4 102 aa9.94□□□□□ -0.82
CHMP1A-204ENST00000547687 C20orf197Q8N268 126 aa9.94□□□□□ -0.82
CHMP1A-204ENST00000547687 K7EQZ3 153 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms