RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 BAALC-AS2P0C853 105 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 SPART-AS1P0CW21 52 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 DEFB1P60022 68 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 DAD1P61803 113 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 DEFB121Q5J5C9 76 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 SMR3AQ99954 134 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 TOMM7Q9P0U1 55 aa2.86□□□□□ -1.95
NPAS3-204ENST00000546849 J3KT08 172 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 ATOX1O00244 68 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 Q6ZTI0 123 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 C1orf158Q8N1D5 194 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 UBL5Q9BZL1 73 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 PKIGQ9Y2B9 76 aa2.85□□□□□ -1.95
NPAS3-204ENST00000546849 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.95
NPAS3-204ENST00000546849 LINC00959A0A1B0GUT2 108 aa2.84□□□□□ -1.95
NPAS3-204ENST00000546849 H3BNG1 76 aa2.84□□□□□ -1.95
NPAS3-204ENST00000546849 C1orf195Q5TG92 126 aa2.84□□□□□ -1.95
NPAS3-204ENST00000546849 C10orf99Q6UWK7 81 aa2.84□□□□□ -1.95
NPAS3-204ENST00000546849 ZNF625Q96I27 306 aaPredicted RBP2.84□□□□□ -1.95
NPAS3-204ENST00000546849 TENM2Q9NT68 2774 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 SORL1Q92673 2214 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 IGLV10-54A0A075B6I4 117 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 IGKV3OR2-268A0A0C4DH90 116 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 TRBV7-7A0A0K0K1E9 115 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 TEX49A0A1B0GTD5 131 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 BCE1O60756 84 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 ANGP03950 147 aaKnown RBP2.83□□□□□ -1.96
NPAS3-204ENST00000546849 DEFB130BP0DP73 79 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 DEFB130AP0DP74 79 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 LELP1Q5T871 98 aa2.83□□□□□ -1.96
NPAS3-204ENST00000546849 DNAH1Q9P2D7 4330 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 TRBV10-3A0A0K0K1G6 114 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 A0A1B0GW54 56 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 C8orf87E5RJ46 101 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 UQCRQO14949 82 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 NPC2P61916 151 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 RPS28P62857 69 aaKnown RBP2.82□□□□□ -1.96
NPAS3-204ENST00000546849 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 DSCR8Q96T75 97 aa2.82□□□□□ -1.96
NPAS3-204ENST00000546849 KLK5Q9Y337 293 aaPredicted RBP2.82□□□□□ -1.96
NPAS3-204ENST00000546849 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 hADV29S1A0JD25 119 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 MT-ATP8P03928 68 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 XCL1P47992 114 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 KRTAP13-1Q8IUC0 172 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 DEFB104AQ8WTQ1 72 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 CLEC2BQ92478 149 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 COL7A1Q02388 2944 aa2.81□□□□□ -1.96
NPAS3-204ENST00000546849 CR1P17927 2039 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 GVQW2A0A096LPI5 108 aaPredicted RBP2.8□□□□□ -1.96
NPAS3-204ENST00000546849 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 RBM3P98179 157 aaKnown RBP2.8□□□□□ -1.96
NPAS3-204ENST00000546849 COX6A2Q02221 97 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 Q6JHZ5 121 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 C5orf38Q86SI9 138 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 DIRC1Q969H9 104 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 LAMTOR3Q9UHA4 124 aa2.8□□□□□ -1.96
NPAS3-204ENST00000546849 LYSTQ99698 3801 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 FAM236DA0A1B0GTK5 79 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 LECT2O14960 151 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 CCKP06307 115 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 FAM236CP0DP71 79 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 CCL18P55774 89 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 SPAG11BQ08648 103 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.79□□□□□ -1.96
NPAS3-204ENST00000546849 LINC00269Q8N2A0 174 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 Q8N814 137 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
NPAS3-204ENST00000546849 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 FAM236AA0A1B0GUQ0 79 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 FAM236BA0A1B0GV22 79 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 CCDC179H3BU77 68 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 NDUFC1O43677 76 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 SDIM1Q6ZPB5 146 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 HERC1Q15751 4861 aa2.78□□□□□ -1.96
NPAS3-204ENST00000546849 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 A0A1B0GU33 70 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 COX7CP15954 63 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 MP68P56378 58 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 DEFB135Q30KP9 77 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 Q5XG85 94 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 HRCT1Q6UXD1 115 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 Q8NAQ8 132 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 WFDC9Q8NEX5 89 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 LINC00526Q96FQ7 95 aa2.77□□□□□ -1.97
NPAS3-204ENST00000546849 C11orf68Q9H3H3 251 aaKnown RBP2.77□□□□□ -1.97
NPAS3-204ENST00000546849 ABCA13Q86UQ4 5058 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 HRNRQ86YZ3 2850 aaPredicted RBP2.76□□□□□ -1.97
NPAS3-204ENST00000546849 TRAV23DV6A0A075B6W5 121 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 LOC110117498A0A087WWA1 95 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 M0R378 163 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 HTN3P15516 51 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 COX7BP24311 80 aa2.76□□□□□ -1.97
NPAS3-204ENST00000546849 FUSP35637 526 aaKnown RBP eCLIP2.76□□□□□ -1.97
NPAS3-204ENST00000546849 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
NPAS3-204ENST00000546849 TMEM258P61165 79 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms