RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 PRO1854Q9UHT4 67 aa5.41□□□□□ -1.54
VPS29-203ENST00000546588 HECTD4Q9Y4D8 3996 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 A0A087WTM6 91 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 PSCAO43653 123 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 SLC25A20O43772 301 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 UBE2AP49459 152 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 LINC00313P59037 77 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 C1orf134Q5TEV5 83 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 Q6ZRP5 223 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
VPS29-203ENST00000546588 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
VPS29-203ENST00000546588 LCE6AA0A183 80 aa5.39□□□□□ -1.55
VPS29-203ENST00000546588 LY6G6CO95867 125 aa5.39□□□□□ -1.55
VPS29-203ENST00000546588 Q8NDZ9 215 aa5.39□□□□□ -1.55
VPS29-203ENST00000546588 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
VPS29-203ENST00000546588 FUSP35637 526 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS29-203ENST00000546588 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
VPS29-203ENST00000546588 C16orf90A8MZG2 172 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 RTL8CO15255 209 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 BCE1O60756 84 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 IGLV6-57P01721 117 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 CCKP06307 115 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 LINC01547P58512 204 aaPredicted RBP5.37□□□□□ -1.55
VPS29-203ENST00000546588 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
VPS29-203ENST00000546588 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 PKD1P98161 4303 aa5.37□□□□□ -1.55
VPS29-203ENST00000546588 M0R2N4 97 aa5.36□□□□□ -1.55
VPS29-203ENST00000546588 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
VPS29-203ENST00000546588 DIRC1Q969H9 104 aa5.36□□□□□ -1.55
VPS29-203ENST00000546588 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
VPS29-203ENST00000546588 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
VPS29-203ENST00000546588 LECT2O14960 151 aa5.35□□□□□ -1.55
VPS29-203ENST00000546588 SDIM1Q6ZPB5 146 aa5.35□□□□□ -1.55
VPS29-203ENST00000546588 KRTAP7-1Q8IUC3 87 aa5.35□□□□□ -1.55
VPS29-203ENST00000546588 LINC01554Q52M75 96 aa5.34□□□□□ -1.55
VPS29-203ENST00000546588 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
VPS29-203ENST00000546588 RYR2Q92736 4967 aa5.34□□□□□ -1.56
VPS29-203ENST00000546588 A0A096LNI7 61 aa5.33□□□□□ -1.56
VPS29-203ENST00000546588 ATP11AUNQ6ZP68 121 aa5.33□□□□□ -1.56
VPS29-203ENST00000546588 FAM218AQ96MZ4 157 aa5.33□□□□□ -1.56
VPS29-203ENST00000546588 CYSTM1Q9H1C7 97 aa5.33□□□□□ -1.56
VPS29-203ENST00000546588 XAGE1AQ9HD64 81 aa5.33□□□□□ -1.56
VPS29-203ENST00000546588 ZNF706Q9Y5V0 76 aaPredicted RBP5.33□□□□□ -1.56
VPS29-203ENST00000546588 DNAH5Q8TE73 4624 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.31□□□□□ -1.56
VPS29-203ENST00000546588 SPRR1AP35321 89 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 ATXN8Q156A1 80 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 S100A7L2Q5SY68 101 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 SMIM29Q86T20 159 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 SMIM11BQ8TCY0 68 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 KCNQ1DNQ9H478 68 aa5.31□□□□□ -1.56
VPS29-203ENST00000546588 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
VPS29-203ENST00000546588 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
VPS29-203ENST00000546588 COX6CP09669 75 aa5.3□□□□□ -1.56
VPS29-203ENST00000546588 Q6ZSA8 131 aa5.3□□□□□ -1.56
VPS29-203ENST00000546588 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
VPS29-203ENST00000546588 KMT2CQ8NEZ4 4911 aaKnown RBP5.3□□□□□ -1.56
VPS29-203ENST00000546588 IGLV1-50A0A075B6I6 118 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 TRBV10-3A0A0K0K1G6 114 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
VPS29-203ENST00000546588 H0YGX0 51 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 NCR3O14931 201 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 Q1T7F1 81 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 C7orf33Q8WU49 177 aa5.29□□□□□ -1.56
VPS29-203ENST00000546588 TRAV23DV6A0A075B6W5 121 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 FAM168BA1KXE4 195 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 H7BZZ5 65 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 Q1RN00 199 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
VPS29-203ENST00000546588 A0A1B0GVY2 172 aa5.27□□□□□ -1.57
VPS29-203ENST00000546588 ELOF1P60002 83 aaKnown RBP5.27□□□□□ -1.57
VPS29-203ENST00000546588 CLEC2BQ92478 149 aa5.27□□□□□ -1.57
VPS29-203ENST00000546588 PLAC8Q9NZF1 115 aa5.27□□□□□ -1.57
VPS29-203ENST00000546588 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
VPS29-203ENST00000546588 A0A1W2PNN7 141 aa5.26□□□□□ -1.57
VPS29-203ENST00000546588 PANO1I0J062 215 aa5.26□□□□□ -1.57
VPS29-203ENST00000546588 Q6JHZ5 121 aa5.26□□□□□ -1.57
VPS29-203ENST00000546588 A6NN06 94 aa5.25□□□□□ -1.57
VPS29-203ENST00000546588 CHTF8P0CG12 524 aa5.25□□□□□ -1.57
VPS29-203ENST00000546588 A0A1B0GW54 56 aa5.24□□□□□ -1.57
VPS29-203ENST00000546588 H7C2G1 150 aa5.24□□□□□ -1.57
VPS29-203ENST00000546588 IGKV2-24A0A0C4DH68 120 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 TEX49A0A1B0GTD5 131 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 LINC00575Q6W349 94 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 Q6ZRX8 168 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 PKHD1P08F94 4074 aa5.23□□□□□ -1.57
VPS29-203ENST00000546588 TRAV7A0A075B6U4 112 aa5.22□□□□□ -1.57
VPS29-203ENST00000546588 A0A087WYN8 130 aa5.22□□□□□ -1.57
VPS29-203ENST00000546588 ASB16-AS1Q495Z4 193 aa5.22□□□□□ -1.57
VPS29-203ENST00000546588 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
VPS29-203ENST00000546588 Q8N9P0 234 aaPredicted RBP5.22□□□□□ -1.57
VPS29-203ENST00000546588 KRTAP5-11Q6L8G4 156 aa5.21□□□□□ -1.58
VPS29-203ENST00000546588 KRTAP13-1Q8IUC0 172 aa5.21□□□□□ -1.58
VPS29-203ENST00000546588 H3BQ85 93 aa5.2□□□□□ -1.58
VPS29-203ENST00000546588 COX7BP24311 80 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms