RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ALMS1Q8TCU4 4167 aa7.4□□□□□ -1.22
CCDC38-202ENST00000546386 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.23
CCDC38-202ENST00000546386 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.23
CCDC38-202ENST00000546386 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.23
CCDC38-202ENST00000546386 DHRS4-AS1Q9P1J3 65 aa7.4□□□□□ -1.23
CCDC38-202ENST00000546386 FAT1Q14517 4588 aa7.39□□□□□ -1.23
CCDC38-202ENST00000546386 ACYP1P07311 99 aa7.38□□□□□ -1.23
CCDC38-202ENST00000546386 LINC00643Q86TS7 51 aa7.38□□□□□ -1.23
CCDC38-202ENST00000546386 PSORS1C2Q9UIG4 136 aa7.38□□□□□ -1.23
CCDC38-202ENST00000546386 TRBV7-4A0A0J9YYF1 115 aa7.37□□□□□ -1.23
CCDC38-202ENST00000546386 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
CCDC38-202ENST00000546386 HRCT1Q6UXD1 115 aa7.37□□□□□ -1.23
CCDC38-202ENST00000546386 RYR3Q15413 4870 aa7.37□□□□□ -1.23
CCDC38-202ENST00000546386 IGLV9-49A0A0B4J1Y8 123 aa7.36□□□□□ -1.23
CCDC38-202ENST00000546386 SMIM29Q86T20 159 aa7.36□□□□□ -1.23
CCDC38-202ENST00000546386 ANAPC13Q9BS18 74 aa7.36□□□□□ -1.23
CCDC38-202ENST00000546386 Q6ZVQ6 151 aa7.36□□□□□ -1.23
CCDC38-202ENST00000546386 KRTAP10-1P60331 282 aa7.35□□□□□ -1.23
CCDC38-202ENST00000546386 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
CCDC38-202ENST00000546386 UBL5Q9BZL1 73 aa7.35□□□□□ -1.23
CCDC38-202ENST00000546386 A0A1W2PNM2 257 aa7.34□□□□□ -1.23
CCDC38-202ENST00000546386 LINC00474Q9P2X8 69 aa7.34□□□□□ -1.23
CCDC38-202ENST00000546386 LOC110117498A0A087WWA1 95 aa7.33□□□□□ -1.24
CCDC38-202ENST00000546386 RYR2Q92736 4967 aa7.31□□□□□ -1.24
CCDC38-202ENST00000546386 IGLV5-48A0A075B6I7 105 aa7.31□□□□□ -1.24
CCDC38-202ENST00000546386 Q6JHZ5 121 aa7.31□□□□□ -1.24
CCDC38-202ENST00000546386 BPY2O14599 106 aa7.3□□□□□ -1.24
CCDC38-202ENST00000546386 BCE1O60756 84 aa7.3□□□□□ -1.24
CCDC38-202ENST00000546386 IGFL1Q6UW32 110 aa7.3□□□□□ -1.24
CCDC38-202ENST00000546386 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
CCDC38-202ENST00000546386 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
CCDC38-202ENST00000546386 TRBV7-7A0A0K0K1E9 115 aa7.29□□□□□ -1.24
CCDC38-202ENST00000546386 F8WEM9 126 aa7.29□□□□□ -1.24
CCDC38-202ENST00000546386 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
CCDC38-202ENST00000546386 NREPQ16612 68 aa7.28□□□□□ -1.24
CCDC38-202ENST00000546386 A0A087WSZ3 146 aa7.28□□□□□ -1.24
CCDC38-202ENST00000546386 C9orf153Q5TBE3 101 aa7.28□□□□□ -1.24
CCDC38-202ENST00000546386 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
CCDC38-202ENST00000546386 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
CCDC38-202ENST00000546386 RPL37AP61513 92 aaKnown RBP7.26□□□□□ -1.25
CCDC38-202ENST00000546386 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
CCDC38-202ENST00000546386 PDE6GP18545 87 aa7.22□□□□□ -1.25
CCDC38-202ENST00000546386 MOBPQ13875 183 aa7.22□□□□□ -1.25
CCDC38-202ENST00000546386 Q8NBF4 154 aa7.22□□□□□ -1.25
CCDC38-202ENST00000546386 Q6Q795 121 aa7.21□□□□□ -1.25
CCDC38-202ENST00000546386 H3BQ85 93 aa7.21□□□□□ -1.26
CCDC38-202ENST00000546386 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
CCDC38-202ENST00000546386 ZNF861PO60384 105 aa7.2□□□□□ -1.26
CCDC38-202ENST00000546386 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
CCDC38-202ENST00000546386 CYSTM1Q9H1C7 97 aa7.19□□□□□ -1.26
CCDC38-202ENST00000546386 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
CCDC38-202ENST00000546386 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
CCDC38-202ENST00000546386 K7EQZ3 153 aa7.18□□□□□ -1.26
CCDC38-202ENST00000546386 H0Y9J4 135 aa7.17□□□□□ -1.26
CCDC38-202ENST00000546386 LCE6AA0A183 80 aa7.16□□□□□ -1.26
CCDC38-202ENST00000546386 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
CCDC38-202ENST00000546386 FLG2Q5D862 2391 aaPredicted RBP7.16□□□□□ -1.26
CCDC38-202ENST00000546386 CRYGAP11844 174 aa7.16□□□□□ -1.26
CCDC38-202ENST00000546386 A0A087X002 238 aa7.15□□□□□ -1.26
CCDC38-202ENST00000546386 IGKV4-1P06312 121 aa7.14□□□□□ -1.27
CCDC38-202ENST00000546386 DSCR10P59022 87 aa7.14□□□□□ -1.27
CCDC38-202ENST00000546386 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
CCDC38-202ENST00000546386 WFDC13Q8IUB5 93 aa7.13□□□□□ -1.27
CCDC38-202ENST00000546386 LRP1Q07954 4544 aaKnown RBP7.13□□□□□ -1.27
CCDC38-202ENST00000546386 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
CCDC38-202ENST00000546386 Q6ZSA8 131 aa7.12□□□□□ -1.27
CCDC38-202ENST00000546386 SS18L2Q9UHA2 77 aa7.12□□□□□ -1.27
CCDC38-202ENST00000546386 CXCL6P80162 114 aa7.12□□□□□ -1.27
CCDC38-202ENST00000546386 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
CCDC38-202ENST00000546386 SNURFQ9Y675 71 aa7.11□□□□□ -1.27
CCDC38-202ENST00000546386 SPRR1BP22528 89 aa7.1□□□□□ -1.27
CCDC38-202ENST00000546386 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
CCDC38-202ENST00000546386 ATOX1O00244 68 aa7.09□□□□□ -1.28
CCDC38-202ENST00000546386 MYCBP2O75592 4640 aa7.08□□□□□ -1.28
CCDC38-202ENST00000546386 C20orf197Q8N268 126 aa7.08□□□□□ -1.28
CCDC38-202ENST00000546386 IGLV8-61A0A075B6I0 122 aa7.08□□□□□ -1.28
CCDC38-202ENST00000546386 COX7CP15954 63 aa7.06□□□□□ -1.28
CCDC38-202ENST00000546386 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
CCDC38-202ENST00000546386 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
CCDC38-202ENST00000546386 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
CCDC38-202ENST00000546386 PLA2G1BP04054 148 aaKnown RBP7.04□□□□□ -1.28
CCDC38-202ENST00000546386 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
CCDC38-202ENST00000546386 ZNF706Q9Y5V0 76 aaPredicted RBP7.04□□□□□ -1.28
CCDC38-202ENST00000546386 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
CCDC38-202ENST00000546386 DMBT1Q9UGM3 2413 aaPredicted RBP7.02□□□□□ -1.29
CCDC38-202ENST00000546386 UQCRQO14949 82 aa7.02□□□□□ -1.29
CCDC38-202ENST00000546386 LINC00472Q9H8W2 130 aa7.02□□□□□ -1.29
CCDC38-202ENST00000546386 IGHV6-1A0A0B4J1U7 121 aa7.02□□□□□ -1.29
CCDC38-202ENST00000546386 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
CCDC38-202ENST00000546386 HSPG2P98160 4391 aa7□□□□□ -1.29
CCDC38-202ENST00000546386 Q96NJ1 140 aa7□□□□□ -1.29
CCDC38-202ENST00000546386 KRTAP1-4P0C5Y4 121 aa6.99□□□□□ -1.29
CCDC38-202ENST00000546386 HCG22E2RYF7 251 aa6.98□□□□□ -1.29
CCDC38-202ENST00000546386 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
CCDC38-202ENST00000546386 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
CCDC38-202ENST00000546386 PKHD1L1Q86WI1 4243 aa6.95□□□□□ -1.3
CCDC38-202ENST00000546386 PRR15Q8IV56 129 aa6.95□□□□□ -1.3
CCDC38-202ENST00000546386 OCR1Q9BZK8 76 aa6.94□□□□□ -1.3
CCDC38-202ENST00000546386 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
CCDC38-202ENST00000546386 A8MWP4 228 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms