RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
COPS7A-221ENST00000546229 SLC7A5P1Q8MH63 180 aa6.46□□□□□ -1.38
COPS7A-221ENST00000546229 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
COPS7A-221ENST00000546229 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
COPS7A-221ENST00000546229 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
COPS7A-221ENST00000546229 OBSCN-AS1Q96MR7 158 aa6.44□□□□□ -1.38
COPS7A-221ENST00000546229 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
COPS7A-221ENST00000546229 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
COPS7A-221ENST00000546229 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
COPS7A-221ENST00000546229 KRTDAPP60985 99 aa6.42□□□□□ -1.38
COPS7A-221ENST00000546229 Q6JHZ5 121 aa6.42□□□□□ -1.38
COPS7A-221ENST00000546229 Q6ZQY7 126 aa6.42□□□□□ -1.38
COPS7A-221ENST00000546229 ATOH7Q8N100 152 aa6.42□□□□□ -1.38
COPS7A-221ENST00000546229 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
COPS7A-221ENST00000546229 F8WEM9 126 aa6.39□□□□□ -1.39
COPS7A-221ENST00000546229 CFC1P0CG37 223 aa6.39□□□□□ -1.39
COPS7A-221ENST00000546229 A8MUU9 505 aa6.38□□□□□ -1.39
COPS7A-221ENST00000546229 MT2AP02795 61 aa6.38□□□□□ -1.39
COPS7A-221ENST00000546229 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
COPS7A-221ENST00000546229 Q6Q795 121 aa6.38□□□□□ -1.39
COPS7A-221ENST00000546229 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
COPS7A-221ENST00000546229 hADV29S1A0JD25 119 aa6.37□□□□□ -1.39
COPS7A-221ENST00000546229 C20orf202A1L168 122 aa6.35□□□□□ -1.39
COPS7A-221ENST00000546229 LCE2BO14633 110 aa6.35□□□□□ -1.39
COPS7A-221ENST00000546229 H3BUT2 72 aa6.34□□□□□ -1.39
COPS7A-221ENST00000546229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.34□□□□□ -1.39
COPS7A-221ENST00000546229 PPDPFLQ8WWR9 84 aa6.34□□□□□ -1.39
COPS7A-221ENST00000546229 Q96NJ1 140 aa6.34□□□□□ -1.39
COPS7A-221ENST00000546229 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
COPS7A-221ENST00000546229 MT1FP04733 61 aa6.33□□□□□ -1.4
COPS7A-221ENST00000546229 VAMP3Q15836 100 aa6.32□□□□□ -1.4
COPS7A-221ENST00000546229 LST1O00453 97 aa6.31□□□□□ -1.4
COPS7A-221ENST00000546229 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
COPS7A-221ENST00000546229 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
COPS7A-221ENST00000546229 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
COPS7A-221ENST00000546229 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
COPS7A-221ENST00000546229 C12orf57Q99622 126 aa6.27□□□□□ -1.41
COPS7A-221ENST00000546229 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
COPS7A-221ENST00000546229 HRES1P13985 223 aa6.26□□□□□ -1.41
COPS7A-221ENST00000546229 BVES-AS1Q5T3Y7 98 aa6.26□□□□□ -1.41
COPS7A-221ENST00000546229 FAM218AQ96MZ4 157 aa6.26□□□□□ -1.41
COPS7A-221ENST00000546229 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
COPS7A-221ENST00000546229 TEN1Q86WV5 123 aa6.25□□□□□ -1.41
COPS7A-221ENST00000546229 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
COPS7A-221ENST00000546229 DSCR10P59022 87 aa6.24□□□□□ -1.41
COPS7A-221ENST00000546229 HIST3H2BBQ8N257 126 aa6.24□□□□□ -1.41
COPS7A-221ENST00000546229 SNHG12Q9BXW3 62 aa6.24□□□□□ -1.41
COPS7A-221ENST00000546229 A0A087WSZ3 146 aa6.23□□□□□ -1.41
COPS7A-221ENST00000546229 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
COPS7A-221ENST00000546229 A0A1W2PNM2 257 aa6.21□□□□□ -1.42
COPS7A-221ENST00000546229 NDUFV3P56181 108 aaKnown RBP6.21□□□□□ -1.42
COPS7A-221ENST00000546229 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
COPS7A-221ENST00000546229 MACF1Q9UPN3 7388 aaKnown RBP6.19□□□□□ -1.42
COPS7A-221ENST00000546229 COX8AP10176 69 aa6.17□□□□□ -1.42
COPS7A-221ENST00000546229 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
COPS7A-221ENST00000546229 A0A0B4J2C4 111 aa6.16□□□□□ -1.42
COPS7A-221ENST00000546229 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
COPS7A-221ENST00000546229 HSBP1L1C9JCN9 74 aa6.15□□□□□ -1.42
COPS7A-221ENST00000546229 H3BMG7 143 aa6.15□□□□□ -1.42
COPS7A-221ENST00000546229 DLEU1O43261 78 aa6.15□□□□□ -1.42
COPS7A-221ENST00000546229 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
COPS7A-221ENST00000546229 SIGMAR1Q99720 223 aa6.15□□□□□ -1.42
COPS7A-221ENST00000546229 H0YGX0 51 aa6.14□□□□□ -1.43
COPS7A-221ENST00000546229 S100A1P23297 94 aa6.14□□□□□ -1.43
COPS7A-221ENST00000546229 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
COPS7A-221ENST00000546229 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
COPS7A-221ENST00000546229 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
COPS7A-221ENST00000546229 LINC00313P59037 77 aa6.13□□□□□ -1.43
COPS7A-221ENST00000546229 C2orf91Q6ZV80 131 aa6.13□□□□□ -1.43
COPS7A-221ENST00000546229 LINC00472Q9H8W2 130 aa6.13□□□□□ -1.43
COPS7A-221ENST00000546229 A0A1B0GX51 115 aa6.12□□□□□ -1.43
COPS7A-221ENST00000546229 TRBV7-4A0A0J9YYF1 115 aa6.11□□□□□ -1.43
COPS7A-221ENST00000546229 HIGD1BQ9P298 99 aa6.11□□□□□ -1.43
COPS7A-221ENST00000546229 IGKV4-1P06312 121 aa6.1□□□□□ -1.43
COPS7A-221ENST00000546229 S100A2P29034 98 aa6.1□□□□□ -1.43
COPS7A-221ENST00000546229 RBM12B-AS1Q9P1G2 102 aa6.1□□□□□ -1.43
COPS7A-221ENST00000546229 RAB37Q96AX2 223 aa6.09□□□□□ -1.43
COPS7A-221ENST00000546229 TRIAP1O43715 76 aa6.07□□□□□ -1.44
COPS7A-221ENST00000546229 FABP2P12104 132 aa6.07□□□□□ -1.44
COPS7A-221ENST00000546229 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
COPS7A-221ENST00000546229 C14orf144Q96I85 54 aa6.07□□□□□ -1.44
COPS7A-221ENST00000546229 FXYD2P54710 66 aa6.05□□□□□ -1.44
COPS7A-221ENST00000546229 SNCGO76070 127 aa6.04□□□□□ -1.44
COPS7A-221ENST00000546229 S100A6P06703 90 aa6.04□□□□□ -1.44
COPS7A-221ENST00000546229 CEND1Q8N111 149 aa6.04□□□□□ -1.44
COPS7A-221ENST00000546229 PRO1854Q9UHT4 67 aa6.04□□□□□ -1.44
COPS7A-221ENST00000546229 IGHV6-1A0A0B4J1U7 121 aa6.03□□□□□ -1.44
COPS7A-221ENST00000546229 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
COPS7A-221ENST00000546229 A0A1B0GV72 72 aa6.02□□□□□ -1.45
COPS7A-221ENST00000546229 GHRHP01286 108 aa6.02□□□□□ -1.45
COPS7A-221ENST00000546229 A0A1B0GVX0 72 aa6.01□□□□□ -1.45
COPS7A-221ENST00000546229 SPATA45Q537H7 98 aa6.01□□□□□ -1.45
COPS7A-221ENST00000546229 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
COPS7A-221ENST00000546229 PAM16Q9Y3D7 125 aa6.01□□□□□ -1.45
COPS7A-221ENST00000546229 C8orf87E5RJ46 101 aa6□□□□□ -1.45
COPS7A-221ENST00000546229 CCKP06307 115 aa6□□□□□ -1.45
COPS7A-221ENST00000546229 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
COPS7A-221ENST00000546229 SPINK7P58062 85 aa5.99□□□□□ -1.45
COPS7A-221ENST00000546229 TRACP01848 142 aa5.98□□□□□ -1.45
COPS7A-221ENST00000546229 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms