RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SPRR4Q96PI1 79 aa11.81□□□□□ -0.52
SKP2-208ENST00000546211 DYNC1H1Q14204 4646 aaKnown RBP11.81□□□□□ -0.52
SKP2-208ENST00000546211 TRBV7-4A0A0J9YYF1 115 aa11.8□□□□□ -0.52
SKP2-208ENST00000546211 Q6ZQT0 140 aa11.8□□□□□ -0.52
SKP2-208ENST00000546211 ACYP1P07311 99 aa11.79□□□□□ -0.52
SKP2-208ENST00000546211 C21orf62-AS1Q17RA5 79 aa11.78□□□□□ -0.52
SKP2-208ENST00000546211 VPS25Q9BRG1 176 aa11.76□□□□□ -0.53
SKP2-208ENST00000546211 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
SKP2-208ENST00000546211 LINC00483Q53H64 154 aa11.75□□□□□ -0.53
SKP2-208ENST00000546211 SMR3BP02814 79 aaPredicted RBP11.73□□□□□ -0.53
SKP2-208ENST00000546211 IGLV8-61A0A075B6I0 122 aa11.72□□□□□ -0.53
SKP2-208ENST00000546211 CDIP1Q9H305 208 aa11.71□□□□□ -0.54
SKP2-208ENST00000546211 Q6JHZ5 121 aa11.67□□□□□ -0.54
SKP2-208ENST00000546211 IGLV9-49A0A0B4J1Y8 123 aa11.67□□□□□ -0.54
SKP2-208ENST00000546211 IGFL1Q6UW32 110 aa11.67□□□□□ -0.54
SKP2-208ENST00000546211 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
SKP2-208ENST00000546211 APOBP04114 4563 aaKnown RBP11.66□□□□□ -0.54
SKP2-208ENST00000546211 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
SKP2-208ENST00000546211 ANAPC11Q9NYG5 84 aa11.66□□□□□ -0.54
SKP2-208ENST00000546211 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
SKP2-208ENST00000546211 Q8NBF4 154 aa11.64□□□□□ -0.55
SKP2-208ENST00000546211 A0A1W2PNM2 257 aa11.63□□□□□ -0.55
SKP2-208ENST00000546211 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
SKP2-208ENST00000546211 SPINK6Q6UWN8 80 aa11.62□□□□□ -0.55
SKP2-208ENST00000546211 A0A1B0GW54 56 aa11.62□□□□□ -0.55
SKP2-208ENST00000546211 UBL5Q9BZL1 73 aa11.61□□□□□ -0.55
SKP2-208ENST00000546211 A0A0G2JQZ4 141 aa11.6□□□□□ -0.55
SKP2-208ENST00000546211 MOBPQ13875 183 aa11.59□□□□□ -0.55
SKP2-208ENST00000546211 LINC00643Q86TS7 51 aa11.58□□□□□ -0.55
SKP2-208ENST00000546211 VPS13BQ7Z7G8 4022 aa11.58□□□□□ -0.56
SKP2-208ENST00000546211 FAM229BQ4G0N7 80 aa11.58□□□□□ -0.56
SKP2-208ENST00000546211 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
SKP2-208ENST00000546211 CRYGAP11844 174 aa11.57□□□□□ -0.56
SKP2-208ENST00000546211 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
SKP2-208ENST00000546211 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
SKP2-208ENST00000546211 PLA2G1BP04054 148 aaKnown RBP11.55□□□□□ -0.56
SKP2-208ENST00000546211 Q6Q795 121 aa11.54□□□□□ -0.56
SKP2-208ENST00000546211 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
SKP2-208ENST00000546211 Q6ZVQ6 151 aa11.54□□□□□ -0.56
SKP2-208ENST00000546211 MT-ATP8P03928 68 aa11.53□□□□□ -0.56
SKP2-208ENST00000546211 NREPQ16612 68 aa11.51□□□□□ -0.57
SKP2-208ENST00000546211 SSBP3-AS1Q7Z2R9 100 aa11.51□□□□□ -0.57
SKP2-208ENST00000546211 A0A087X002 238 aa11.5□□□□□ -0.57
SKP2-208ENST00000546211 A0A087WSZ3 146 aa11.49□□□□□ -0.57
SKP2-208ENST00000546211 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
SKP2-208ENST00000546211 KRTAP13-2Q52LG2 175 aa11.47□□□□□ -0.57
SKP2-208ENST00000546211 ATP5EP2Q5VTU8 51 aa11.47□□□□□ -0.57
SKP2-208ENST00000546211 Q5VSD8 79 aa11.46□□□□□ -0.57
SKP2-208ENST00000546211 HRCT1Q6UXD1 115 aa11.45□□□□□ -0.58
SKP2-208ENST00000546211 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
SKP2-208ENST00000546211 FAT1Q14517 4588 aa11.44□□□□□ -0.58
SKP2-208ENST00000546211 RYR1P21817 5038 aa11.42□□□□□ -0.58
SKP2-208ENST00000546211 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
SKP2-208ENST00000546211 CD164Q04900 197 aa11.41□□□□□ -0.58
SKP2-208ENST00000546211 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
SKP2-208ENST00000546211 CXCL6P80162 114 aa11.4□□□□□ -0.58
SKP2-208ENST00000546211 HSPG2P98160 4391 aa11.39□□□□□ -0.59
SKP2-208ENST00000546211 BPY2O14599 106 aa11.39□□□□□ -0.59
SKP2-208ENST00000546211 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
SKP2-208ENST00000546211 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
SKP2-208ENST00000546211 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
SKP2-208ENST00000546211 Q8N1X5 172 aa11.35□□□□□ -0.59
SKP2-208ENST00000546211 HIST1H4AP62805 103 aaKnown RBP11.33□□□□□ -0.6
SKP2-208ENST00000546211 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
SKP2-208ENST00000546211 KIAA1109Q2LD37 5005 aa11.31□□□□□ -0.6
SKP2-208ENST00000546211 LINC00472Q9H8W2 130 aa11.3□□□□□ -0.6
SKP2-208ENST00000546211 DEFB116Q30KQ4 102 aa11.29□□□□□ -0.6
SKP2-208ENST00000546211 KRTAP17-1Q9BYP8 105 aa11.28□□□□□ -0.6
SKP2-208ENST00000546211 SCGB1A1P11684 91 aa11.28□□□□□ -0.6
SKP2-208ENST00000546211 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
SKP2-208ENST00000546211 J3KT08 172 aa11.26□□□□□ -0.61
SKP2-208ENST00000546211 LINC00304Q8N9R0 145 aa11.26□□□□□ -0.61
SKP2-208ENST00000546211 A0A087WVE0 104 aa11.25□□□□□ -0.61
SKP2-208ENST00000546211 DSCR10P59022 87 aa11.25□□□□□ -0.61
SKP2-208ENST00000546211 LIMD2Q9BT23 127 aa11.25□□□□□ -0.61
SKP2-208ENST00000546211 SPINK1P00995 79 aa11.24□□□□□ -0.61
SKP2-208ENST00000546211 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
SKP2-208ENST00000546211 Q8N9L7 120 aa11.24□□□□□ -0.61
SKP2-208ENST00000546211 Q96NJ1 140 aa11.24□□□□□ -0.61
SKP2-208ENST00000546211 Q5XG85 94 aa11.24□□□□□ -0.61
SKP2-208ENST00000546211 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
SKP2-208ENST00000546211 IGKV4-1P06312 121 aa11.22□□□□□ -0.61
SKP2-208ENST00000546211 FAM236AA0A1B0GUQ0 79 aa11.2□□□□□ -0.62
SKP2-208ENST00000546211 FAM236BA0A1B0GV22 79 aa11.2□□□□□ -0.62
SKP2-208ENST00000546211 K7EQZ3 153 aa11.2□□□□□ -0.62
SKP2-208ENST00000546211 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
SKP2-208ENST00000546211 A8MWP4 228 aa11.18□□□□□ -0.62
SKP2-208ENST00000546211 NDUFB1O75438 58 aa11.16□□□□□ -0.62
SKP2-208ENST00000546211 PRR15Q8IV56 129 aa11.14□□□□□ -0.63
SKP2-208ENST00000546211 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
SKP2-208ENST00000546211 C1orf195Q5TG92 126 aa11.12□□□□□ -0.63
SKP2-208ENST00000546211 A0A1B0GVX0 72 aa11.07□□□□□ -0.64
SKP2-208ENST00000546211 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
SKP2-208ENST00000546211 HCG22E2RYF7 251 aa11.07□□□□□ -0.64
SKP2-208ENST00000546211 ATOX1O00244 68 aa11.07□□□□□ -0.64
SKP2-208ENST00000546211 IGHV6-1A0A0B4J1U7 121 aa11.05□□□□□ -0.64
SKP2-208ENST00000546211 ANAPC13Q9BS18 74 aa11.03□□□□□ -0.64
SKP2-208ENST00000546211 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
SKP2-208ENST00000546211 OXTP01178 125 aa11.02□□□□□ -0.65
SKP2-208ENST00000546211 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms