RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
TRAF1-203ENST00000546084 BCE1O60756 84 aa6.39□□□□□ -1.39
TRAF1-203ENST00000546084 K7EIL1 84 aa6.38□□□□□ -1.39
TRAF1-203ENST00000546084 FAM229BQ4G0N7 80 aa6.38□□□□□ -1.39
TRAF1-203ENST00000546084 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
TRAF1-203ENST00000546084 SMIM29Q86T20 159 aa6.38□□□□□ -1.39
TRAF1-203ENST00000546084 GVQW2A0A096LPI5 108 aaPredicted RBP6.38□□□□□ -1.39
TRAF1-203ENST00000546084 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
TRAF1-203ENST00000546084 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
TRAF1-203ENST00000546084 TRAV22A0A0B4J277 110 aa6.37□□□□□ -1.39
TRAF1-203ENST00000546084 COL7A1Q02388 2944 aa6.37□□□□□ -1.39
TRAF1-203ENST00000546084 LY6G6CO95867 125 aa6.36□□□□□ -1.39
TRAF1-203ENST00000546084 ANAPC11Q9NYG5 84 aa6.36□□□□□ -1.39
TRAF1-203ENST00000546084 Q8N377 158 aa6.35□□□□□ -1.39
TRAF1-203ENST00000546084 DHRS4-AS1Q9P1J3 65 aa6.35□□□□□ -1.39
TRAF1-203ENST00000546084 Q9BRP9 147 aa6.35□□□□□ -1.39
TRAF1-203ENST00000546084 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
TRAF1-203ENST00000546084 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
TRAF1-203ENST00000546084 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
TRAF1-203ENST00000546084 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
TRAF1-203ENST00000546084 Q6ZRX8 168 aa6.33□□□□□ -1.4
TRAF1-203ENST00000546084 LINC00208Q96KT6 92 aa6.33□□□□□ -1.4
TRAF1-203ENST00000546084 LINC00476Q8WZB0 136 aa6.32□□□□□ -1.4
TRAF1-203ENST00000546084 K7EQZ3 153 aa6.31□□□□□ -1.4
TRAF1-203ENST00000546084 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
TRAF1-203ENST00000546084 PCOTHQ58A44 107 aa6.31□□□□□ -1.4
TRAF1-203ENST00000546084 ANK3Q12955 4377 aaKnown RBP6.31□□□□□ -1.4
TRAF1-203ENST00000546084 LINC01554Q52M75 96 aa6.3□□□□□ -1.4
TRAF1-203ENST00000546084 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
TRAF1-203ENST00000546084 C1orf64Q8NEQ6 169 aa6.29□□□□□ -1.4
TRAF1-203ENST00000546084 OCR1Q9BZK8 76 aa6.29□□□□□ -1.4
TRAF1-203ENST00000546084 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
TRAF1-203ENST00000546084 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
TRAF1-203ENST00000546084 IGLV1-50A0A075B6I6 118 aa6.28□□□□□ -1.4
TRAF1-203ENST00000546084 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
TRAF1-203ENST00000546084 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
TRAF1-203ENST00000546084 IGHV6-1A0A0B4J1U7 121 aa6.27□□□□□ -1.41
TRAF1-203ENST00000546084 KCNQ1DNQ9H478 68 aa6.27□□□□□ -1.41
TRAF1-203ENST00000546084 NDUFB1O75438 58 aa6.27□□□□□ -1.41
TRAF1-203ENST00000546084 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
TRAF1-203ENST00000546084 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
TRAF1-203ENST00000546084 H3BNG1 76 aa6.25□□□□□ -1.41
TRAF1-203ENST00000546084 Q8NBF4 154 aa6.25□□□□□ -1.41
TRAF1-203ENST00000546084 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
TRAF1-203ENST00000546084 IGLV5-48A0A075B6I7 105 aa6.23□□□□□ -1.41
TRAF1-203ENST00000546084 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
TRAF1-203ENST00000546084 Q1T7F1 81 aa6.23□□□□□ -1.41
TRAF1-203ENST00000546084 C16orf90A8MZG2 172 aa6.22□□□□□ -1.41
TRAF1-203ENST00000546084 MOBPQ13875 183 aa6.22□□□□□ -1.41
TRAF1-203ENST00000546084 C14orf177Q52M58 125 aa6.22□□□□□ -1.41
TRAF1-203ENST00000546084 hDV103S1A0JD37 113 aa6.22□□□□□ -1.41
TRAF1-203ENST00000546084 A8MU10 97 aa6.2□□□□□ -1.42
TRAF1-203ENST00000546084 DSCR10P59022 87 aa6.19□□□□□ -1.42
TRAF1-203ENST00000546084 IGLV5-52A0A0A0MRZ9 124 aa6.19□□□□□ -1.42
TRAF1-203ENST00000546084 NBDYA0A0U1RRE5 68 aa6.19□□□□□ -1.42
TRAF1-203ENST00000546084 H0Y9P7 68 aa6.18□□□□□ -1.42
TRAF1-203ENST00000546084 LINC00313P59037 77 aa6.18□□□□□ -1.42
TRAF1-203ENST00000546084 CYP4F30PQ9H0H9 118 aa6.18□□□□□ -1.42
TRAF1-203ENST00000546084 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
TRAF1-203ENST00000546084 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
TRAF1-203ENST00000546084 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
TRAF1-203ENST00000546084 PANO1I0J062 215 aa6.17□□□□□ -1.42
TRAF1-203ENST00000546084 A0A1B0GW54 56 aa6.15□□□□□ -1.42
TRAF1-203ENST00000546084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
TRAF1-203ENST00000546084 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
TRAF1-203ENST00000546084 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
TRAF1-203ENST00000546084 NUPR2A6NF83 97 aa6.13□□□□□ -1.43
TRAF1-203ENST00000546084 RTL8CO15255 209 aa6.13□□□□□ -1.43
TRAF1-203ENST00000546084 SPRR4Q96PI1 79 aa6.13□□□□□ -1.43
TRAF1-203ENST00000546084 TLX1NBP0CAT3 122 aa6.13□□□□□ -1.43
TRAF1-203ENST00000546084 LOC101927531A0A1B0GV80 90 aa6.12□□□□□ -1.43
TRAF1-203ENST00000546084 TNP2Q05952 138 aa6.12□□□□□ -1.43
TRAF1-203ENST00000546084 Q5VV11 94 aa6.12□□□□□ -1.43
TRAF1-203ENST00000546084 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
TRAF1-203ENST00000546084 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
TRAF1-203ENST00000546084 SPRR1AP35321 89 aa6.11□□□□□ -1.43
TRAF1-203ENST00000546084 C1orf134Q5TEV5 83 aa6.11□□□□□ -1.43
TRAF1-203ENST00000546084 APLNQ9ULZ1 77 aa6.11□□□□□ -1.43
TRAF1-203ENST00000546084 PLA2G2DQ9UNK4 145 aa6.11□□□□□ -1.43
TRAF1-203ENST00000546084 C9orf163Q8N9P6 203 aa6.09□□□□□ -1.43
TRAF1-203ENST00000546084 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
TRAF1-203ENST00000546084 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
TRAF1-203ENST00000546084 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
TRAF1-203ENST00000546084 IGLV5-37A0A075B6J1 123 aa6.07□□□□□ -1.44
TRAF1-203ENST00000546084 SPINK1P00995 79 aa6.07□□□□□ -1.44
TRAF1-203ENST00000546084 A0A087WTM6 91 aa6.05□□□□□ -1.44
TRAF1-203ENST00000546084 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
TRAF1-203ENST00000546084 SMR3BP02814 79 aaPredicted RBP6.04□□□□□ -1.44
TRAF1-203ENST00000546084 A6NN06 94 aa6.04□□□□□ -1.44
TRAF1-203ENST00000546084 IGKV2D-30A0A075B6S6 120 aa6.03□□□□□ -1.44
TRAF1-203ENST00000546084 IGKV2-30P06310 120 aa6.03□□□□□ -1.44
TRAF1-203ENST00000546084 LCE6AA0A183 80 aa6.02□□□□□ -1.45
TRAF1-203ENST00000546084 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
TRAF1-203ENST00000546084 A8MWP4 228 aa6.01□□□□□ -1.45
TRAF1-203ENST00000546084 CNBPP62633 177 aaKnown RBP6□□□□□ -1.45
TRAF1-203ENST00000546084 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
TRAF1-203ENST00000546084 ANK2Q01484 3957 aa6□□□□□ -1.45
TRAF1-203ENST00000546084 CSAG1Q6PB30 78 aa6□□□□□ -1.45
TRAF1-203ENST00000546084 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
TRAF1-203ENST00000546084 COA5Q86WW8 74 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms