RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 XGP55808 180 aa6.9□□□□□ -1.31
TNC-213ENST00000544972 DSCR8Q96T75 97 aa6.9□□□□□ -1.31
TNC-213ENST00000544972 VPS25Q9BRG1 176 aa6.89□□□□□ -1.31
TNC-213ENST00000544972 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
TNC-213ENST00000544972 ACYP1P07311 99 aa6.87□□□□□ -1.31
TNC-213ENST00000544972 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
TNC-213ENST00000544972 PDE6GP18545 87 aa6.87□□□□□ -1.31
TNC-213ENST00000544972 LINC00483Q53H64 154 aa6.85□□□□□ -1.31
TNC-213ENST00000544972 IGLV8-61A0A075B6I0 122 aa6.85□□□□□ -1.31
TNC-213ENST00000544972 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
TNC-213ENST00000544972 F8WEM9 126 aa6.83□□□□□ -1.32
TNC-213ENST00000544972 ZNF706Q9Y5V0 76 aaPredicted RBP6.83□□□□□ -1.32
TNC-213ENST00000544972 A0A0G2JQZ4 141 aa6.82□□□□□ -1.32
TNC-213ENST00000544972 A0A1W2PNM2 257 aa6.82□□□□□ -1.32
TNC-213ENST00000544972 IGFL1Q6UW32 110 aa6.82□□□□□ -1.32
TNC-213ENST00000544972 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
TNC-213ENST00000544972 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
TNC-213ENST00000544972 APOBP04114 4563 aaKnown RBP6.8□□□□□ -1.32
TNC-213ENST00000544972 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
TNC-213ENST00000544972 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
TNC-213ENST00000544972 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
TNC-213ENST00000544972 Q8NBF4 154 aa6.79□□□□□ -1.32
TNC-213ENST00000544972 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
TNC-213ENST00000544972 IGLV9-49A0A0B4J1Y8 123 aa6.78□□□□□ -1.32
TNC-213ENST00000544972 SIGMAR1Q99720 223 aa6.78□□□□□ -1.32
TNC-213ENST00000544972 KRTAP10-4P60372 401 aaPredicted RBP6.77□□□□□ -1.33
TNC-213ENST00000544972 Q6JHZ5 121 aa6.77□□□□□ -1.33
TNC-213ENST00000544972 LINC00643Q86TS7 51 aa6.77□□□□□ -1.33
TNC-213ENST00000544972 CRYGAP11844 174 aa6.76□□□□□ -1.33
TNC-213ENST00000544972 A0A1B0GW54 56 aa6.75□□□□□ -1.33
TNC-213ENST00000544972 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
TNC-213ENST00000544972 C9orf153Q5TBE3 101 aa6.75□□□□□ -1.33
TNC-213ENST00000544972 Q6ZVQ6 151 aa6.75□□□□□ -1.33
TNC-213ENST00000544972 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
TNC-213ENST00000544972 MOBPQ13875 183 aa6.74□□□□□ -1.33
TNC-213ENST00000544972 FAT1Q14517 4588 aa6.73□□□□□ -1.33
TNC-213ENST00000544972 Q6Q795 121 aa6.73□□□□□ -1.33
TNC-213ENST00000544972 SPINK6Q6UWN8 80 aa6.73□□□□□ -1.33
TNC-213ENST00000544972 A0A087X002 238 aa6.72□□□□□ -1.33
TNC-213ENST00000544972 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
TNC-213ENST00000544972 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
TNC-213ENST00000544972 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
TNC-213ENST00000544972 A0A087WSZ3 146 aa6.7□□□□□ -1.34
TNC-213ENST00000544972 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
TNC-213ENST00000544972 TRBV7-7A0A0K0K1E9 115 aa6.7□□□□□ -1.34
TNC-213ENST00000544972 NREPQ16612 68 aa6.69□□□□□ -1.34
TNC-213ENST00000544972 ATP5EP2Q5VTU8 51 aa6.68□□□□□ -1.34
TNC-213ENST00000544972 PLA2G1BP04054 148 aaKnown RBP6.67□□□□□ -1.34
TNC-213ENST00000544972 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
TNC-213ENST00000544972 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
TNC-213ENST00000544972 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
TNC-213ENST00000544972 IMUPQ9GZP8 106 aa6.66□□□□□ -1.34
TNC-213ENST00000544972 CXCL6P80162 114 aa6.66□□□□□ -1.34
TNC-213ENST00000544972 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
TNC-213ENST00000544972 HSPG2P98160 4391 aa6.65□□□□□ -1.34
TNC-213ENST00000544972 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
TNC-213ENST00000544972 Q5VSD8 79 aa6.64□□□□□ -1.35
TNC-213ENST00000544972 BPY2O14599 106 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 CD164Q04900 197 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 RYR1P21817 5038 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 A0A087WVE0 104 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 SCGB1A1P11684 91 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
TNC-213ENST00000544972 PRR26Q8N8Z3 221 aa6.61□□□□□ -1.35
TNC-213ENST00000544972 DSCR10P59022 87 aa6.6□□□□□ -1.35
TNC-213ENST00000544972 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
TNC-213ENST00000544972 DEFB116Q30KQ4 102 aa6.6□□□□□ -1.35
TNC-213ENST00000544972 Q8N9L7 120 aa6.6□□□□□ -1.35
TNC-213ENST00000544972 TYMSOSQ8TAI1 123 aa6.6□□□□□ -1.35
TNC-213ENST00000544972 Q96NJ1 140 aa6.6□□□□□ -1.35
TNC-213ENST00000544972 SS18L2Q9UHA2 77 aa6.58□□□□□ -1.36
TNC-213ENST00000544972 IGKV4-1P06312 121 aa6.57□□□□□ -1.36
TNC-213ENST00000544972 Q8N1X5 172 aa6.57□□□□□ -1.36
TNC-213ENST00000544972 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
TNC-213ENST00000544972 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
TNC-213ENST00000544972 K7EQZ3 153 aa6.55□□□□□ -1.36
TNC-213ENST00000544972 Q5XG85 94 aa6.55□□□□□ -1.36
TNC-213ENST00000544972 ASB16-AS1Q495Z4 193 aa6.53□□□□□ -1.36
TNC-213ENST00000544972 J3KT08 172 aa6.53□□□□□ -1.36
TNC-213ENST00000544972 PCP4P48539 62 aa6.53□□□□□ -1.36
TNC-213ENST00000544972 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
TNC-213ENST00000544972 A8MWP4 228 aa6.52□□□□□ -1.37
TNC-213ENST00000544972 LINC00304Q8N9R0 145 aa6.52□□□□□ -1.37
TNC-213ENST00000544972 SPINK1P00995 79 aa6.51□□□□□ -1.37
TNC-213ENST00000544972 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
TNC-213ENST00000544972 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
TNC-213ENST00000544972 C1orf195Q5TG92 126 aa6.49□□□□□ -1.37
TNC-213ENST00000544972 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
TNC-213ENST00000544972 LIMD2Q9BT23 127 aa6.49□□□□□ -1.37
TNC-213ENST00000544972 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
TNC-213ENST00000544972 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
TNC-213ENST00000544972 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
TNC-213ENST00000544972 KRTAP4-5Q9BYR2 181 aa6.46□□□□□ -1.37
TNC-213ENST00000544972 FLG2Q5D862 2391 aaPredicted RBP6.46□□□□□ -1.37
TNC-213ENST00000544972 ATOX1O00244 68 aa6.46□□□□□ -1.38
TNC-213ENST00000544972 NDUFB1O75438 58 aa6.46□□□□□ -1.38
TNC-213ENST00000544972 ANAPC13Q9BS18 74 aa6.46□□□□□ -1.38
TNC-213ENST00000544972 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
TNC-213ENST00000544972 A0A1B0GVX0 72 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms