RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
SCARB1-208ENST00000544327 DSCR10P59022 87 aa11.03□□□□□ -0.64
SCARB1-208ENST00000544327 NDUFC1O43677 76 aa11.02□□□□□ -0.64
SCARB1-208ENST00000544327 FAM236DA0A1B0GTK5 79 aa11.02□□□□□ -0.65
SCARB1-208ENST00000544327 FAM236CP0DP71 79 aa11.02□□□□□ -0.65
SCARB1-208ENST00000544327 UBE2AP49459 152 aa11.01□□□□□ -0.65
SCARB1-208ENST00000544327 SNURFQ9Y675 71 aa11□□□□□ -0.65
SCARB1-208ENST00000544327 TMEM254Q8TBM7 123 aa10.99□□□□□ -0.65
SCARB1-208ENST00000544327 VPS13DQ5THJ4 4388 aa10.98□□□□□ -0.65
SCARB1-208ENST00000544327 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
SCARB1-208ENST00000544327 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
SCARB1-208ENST00000544327 CSMD3Q7Z407 3707 aa10.96□□□□□ -0.66
SCARB1-208ENST00000544327 DNAH7Q8WXX0 4024 aa10.96□□□□□ -0.66
SCARB1-208ENST00000544327 A0A0G2JQZ4 141 aa10.95□□□□□ -0.66
SCARB1-208ENST00000544327 A0A0U1RQV1 116 aa10.95□□□□□ -0.66
SCARB1-208ENST00000544327 PANO1I0J062 215 aa10.95□□□□□ -0.66
SCARB1-208ENST00000544327 K7EQZ3 153 aa10.95□□□□□ -0.66
SCARB1-208ENST00000544327 OXTP01178 125 aa10.95□□□□□ -0.66
SCARB1-208ENST00000544327 LCE6AA0A183 80 aa10.94□□□□□ -0.66
SCARB1-208ENST00000544327 A0A087WSZ3 146 aa10.93□□□□□ -0.66
SCARB1-208ENST00000544327 A0A087WTM6 91 aa10.92□□□□□ -0.66
SCARB1-208ENST00000544327 ATP5EP56381 51 aaPredicted RBP10.92□□□□□ -0.66
SCARB1-208ENST00000544327 SERP1Q9Y6X1 66 aa10.91□□□□□ -0.66
SCARB1-208ENST00000544327 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
SCARB1-208ENST00000544327 HCG22E2RYF7 251 aa10.89□□□□□ -0.67
SCARB1-208ENST00000544327 STARD9Q9P2P6 4700 aa10.88□□□□□ -0.67
SCARB1-208ENST00000544327 Q6ZR54 194 aa10.88□□□□□ -0.67
SCARB1-208ENST00000544327 FAM30AQ9NZY2 134 aa10.88□□□□□ -0.67
SCARB1-208ENST00000544327 PRKDCP78527 4128 aaKnown RBP10.84□□□□□ -0.67
SCARB1-208ENST00000544327 LINC00472Q9H8W2 130 aa10.83□□□□□ -0.68
SCARB1-208ENST00000544327 RTL8CO15255 209 aa10.82□□□□□ -0.68
SCARB1-208ENST00000544327 LINC00483Q53H64 154 aa10.82□□□□□ -0.68
SCARB1-208ENST00000544327 DEFB116Q30KQ4 102 aa10.81□□□□□ -0.68
SCARB1-208ENST00000544327 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
SCARB1-208ENST00000544327 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
SCARB1-208ENST00000544327 PLAC8Q9NZF1 115 aa10.8□□□□□ -0.68
SCARB1-208ENST00000544327 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
SCARB1-208ENST00000544327 KRTAP29-1A8MX34 341 aaPredicted RBP10.79□□□□□ -0.68
SCARB1-208ENST00000544327 PRR15Q8IV56 129 aa10.79□□□□□ -0.68
SCARB1-208ENST00000544327 A8MWP4 228 aa10.78□□□□□ -0.68
SCARB1-208ENST00000544327 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
SCARB1-208ENST00000544327 Q5XG85 94 aa10.77□□□□□ -0.68
SCARB1-208ENST00000544327 ZNF706Q9Y5V0 76 aaPredicted RBP10.77□□□□□ -0.68
SCARB1-208ENST00000544327 IGLV5-52A0A0A0MRZ9 124 aa10.77□□□□□ -0.69
SCARB1-208ENST00000544327 WFDC13Q8IUB5 93 aa10.74□□□□□ -0.69
SCARB1-208ENST00000544327 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
SCARB1-208ENST00000544327 HECTD4Q9Y4D8 3996 aa10.74□□□□□ -0.69
SCARB1-208ENST00000544327 C1orf134Q5TEV5 83 aa10.72□□□□□ -0.69
SCARB1-208ENST00000544327 SMIM26A0A096LP01 95 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 ZNF861PO60384 105 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 CASC2Q6XLA1 102 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 WWC2-AS2Q96NR7 200 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 DNAH2Q9P225 4427 aa10.7□□□□□ -0.7
SCARB1-208ENST00000544327 DNAH6Q9C0G6 4158 aa10.69□□□□□ -0.7
SCARB1-208ENST00000544327 Q96NJ1 140 aa10.68□□□□□ -0.7
SCARB1-208ENST00000544327 MP68P56378 58 aa10.65□□□□□ -0.7
SCARB1-208ENST00000544327 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
SCARB1-208ENST00000544327 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
SCARB1-208ENST00000544327 MMP24-AS1A0A0U1RRL7 71 aa10.65□□□□□ -0.71
SCARB1-208ENST00000544327 H3BPC8 53 aa10.65□□□□□ -0.71
SCARB1-208ENST00000544327 DNHD1Q96M86 4753 aa10.65□□□□□ -0.71
SCARB1-208ENST00000544327 NDUFB1O75438 58 aa10.63□□□□□ -0.71
SCARB1-208ENST00000544327 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
SCARB1-208ENST00000544327 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
SCARB1-208ENST00000544327 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
SCARB1-208ENST00000544327 MOBPQ13875 183 aa10.61□□□□□ -0.71
SCARB1-208ENST00000544327 ASB16-AS1Q495Z4 193 aa10.61□□□□□ -0.71
SCARB1-208ENST00000544327 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
SCARB1-208ENST00000544327 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
SCARB1-208ENST00000544327 LY6G6CO95867 125 aa10.59□□□□□ -0.71
SCARB1-208ENST00000544327 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
SCARB1-208ENST00000544327 CYP4F30PQ9H0H9 118 aa10.59□□□□□ -0.71
SCARB1-208ENST00000544327 PRO0628Q9UI54 55 aa10.58□□□□□ -0.72
SCARB1-208ENST00000544327 H0Y9P7 68 aa10.58□□□□□ -0.72
SCARB1-208ENST00000544327 HRCT1Q6UXD1 115 aa10.58□□□□□ -0.72
SCARB1-208ENST00000544327 hDV103S1A0JD37 113 aa10.57□□□□□ -0.72
SCARB1-208ENST00000544327 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
SCARB1-208ENST00000544327 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
SCARB1-208ENST00000544327 ANAPC11Q9NYG5 84 aa10.55□□□□□ -0.72
SCARB1-208ENST00000544327 C8orf17Q9NRJ1 99 aa10.54□□□□□ -0.72
SCARB1-208ENST00000544327 SEC61GP60059 68 aa10.53□□□□□ -0.72
SCARB1-208ENST00000544327 A0A1B0GVX0 72 aa10.52□□□□□ -0.73
SCARB1-208ENST00000544327 FBN3Q75N90 2809 aa10.52□□□□□ -0.73
SCARB1-208ENST00000544327 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
SCARB1-208ENST00000544327 SPANXA2-OT1Q8N9U9 137 aa10.51□□□□□ -0.73
SCARB1-208ENST00000544327 C1orf64Q8NEQ6 169 aa10.51□□□□□ -0.73
SCARB1-208ENST00000544327 ALMS1Q8TCU4 4167 aa10.51□□□□□ -0.73
SCARB1-208ENST00000544327 CD164Q04900 197 aa10.5□□□□□ -0.73
SCARB1-208ENST00000544327 KRTAP10-2P60368 255 aa10.49□□□□□ -0.73
SCARB1-208ENST00000544327 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
SCARB1-208ENST00000544327 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
SCARB1-208ENST00000544327 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
SCARB1-208ENST00000544327 FRAS1Q86XX4 4008 aa10.47□□□□□ -0.73
SCARB1-208ENST00000544327 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
SCARB1-208ENST00000544327 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
SCARB1-208ENST00000544327 Q6ZSA8 131 aa10.46□□□□□ -0.74
SCARB1-208ENST00000544327 V9GYY9 64 aa10.45□□□□□ -0.74
SCARB1-208ENST00000544327 IGHV6-1A0A0B4J1U7 121 aa10.44□□□□□ -0.74
SCARB1-208ENST00000544327 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms