RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FAM74A1Q5RGS3 127 aa1.54□□□□□ -2.16
SCFD1-207ENST00000544052 CLEC2BQ92478 149 aa1.54□□□□□ -2.16
SCFD1-207ENST00000544052 TMEM167BQ9NRX6 74 aa1.54□□□□□ -2.16
SCFD1-207ENST00000544052 TRBV7-3A0A075B6L6 115 aa1.53□□□□□ -2.16
SCFD1-207ENST00000544052 FXYD6-FXYD2A0A087WZ82 144 aa1.53□□□□□ -2.16
SCFD1-207ENST00000544052 CRPP02741 224 aa1.53□□□□□ -2.16
SCFD1-207ENST00000544052 FABP4P15090 132 aa1.53□□□□□ -2.16
SCFD1-207ENST00000544052 S100PP25815 95 aa1.53□□□□□ -2.16
SCFD1-207ENST00000544052 A0A087WWC5 75 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 TRBV10-1A0A0K0K1A3 114 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 M0QY20 66 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 UQCRQO14949 82 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 HBDP02042 147 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
SCFD1-207ENST00000544052 OCIAD2Q56VL3 154 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 CLLU1Q5K131 121 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 LINC00269Q8N2A0 174 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 ZFP30Q9Y2G7 519 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 ANGP03950 147 aaKnown RBP1.52□□□□□ -2.17
SCFD1-207ENST00000544052 TPT1P13693 172 aaKnown RBP1.52□□□□□ -2.17
SCFD1-207ENST00000544052 ZNF56Q15929 161 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 IQCJQ1A5X6 159 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 KCNRGQ8N5I3 272 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 C14orf144Q96I85 54 aa1.52□□□□□ -2.17
SCFD1-207ENST00000544052 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 UBE2G1P62253 170 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 CNBPP62633 177 aaKnown RBP1.51□□□□□ -2.17
SCFD1-207ENST00000544052 TEN1Q86WV5 123 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 FAM213BQ8TBF2 198 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 LINC00526Q96FQ7 95 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 PLAC8Q9NZF1 115 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 A0A096LNI7 61 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-207ENST00000544052 LOC107984156A0A0G2JMH3 177 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 TMEM262E9PQX1 116 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 CCDC179H3BU77 68 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 Q0VG73 95 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 BAGE2Q86Y30 109 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 ARL17AQ8IVW1 177 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 FAM19A2Q8N3H0 131 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 SFT2D1Q8WV19 159 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 RAB37Q96AX2 223 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 RPL39LQ96EH5 51 aaKnown RBP1.51□□□□□ -2.17
SCFD1-207ENST00000544052 CRCT1Q9UGL9 99 aa1.51□□□□□ -2.17
SCFD1-207ENST00000544052 TRBV25-1A0A075B6N4 114 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 IGHV1-24A0A0C4DH33 117 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 MGPP08493 103 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 COX6A2Q02221 97 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 ELOBQ15370 118 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 SPANXN1Q5VSR9 72 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 TCEAL7Q9BRU2 100 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 MUC17Q685J3 4493 aa1.5□□□□□ -2.17
SCFD1-207ENST00000544052 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 IGKV2-29A2NJV5 120 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 MRPS36P82909 103 aaKnown RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 GNG13Q9P2W3 67 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 IGKV3OR2-268A0A0C4DH90 116 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 hDV103S1A0JD37 113 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 A6NN06 94 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 MEIG1Q5JSS6 88 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 C9orf62Q8N4C0 152 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 DPH3Q96FX2 82 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 ZNF625Q96I27 306 aaPredicted RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 DPH3P1Q9H4G8 78 aa1.49□□□□□ -2.17
SCFD1-207ENST00000544052 NHP2Q9NX24 153 aaKnown RBP1.49□□□□□ -2.17
SCFD1-207ENST00000544052 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
SCFD1-207ENST00000544052 TRBV6-5A0A0K0K1A5 114 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 LINC00959A0A1B0GUT2 108 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 CCL25O15444 150 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 NCR2O95944 276 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 GNG4P50150 75 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 POLR2KP53803 58 aaKnown RBP1.47□□□□□ -2.17
SCFD1-207ENST00000544052 MANBALQ9NQG1 85 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 TMEM242Q9NWH2 141 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 KANTRA0A1W2PQU2 76 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 F2Z2F3 143 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 TRACP01848 142 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 CKS2P33552 79 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 PKIAP61925 76 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 Q6ZUT4 128 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 CST9LQ9H4G1 147 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 C14orf132Q9NPU4 83 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 MED9Q9NWA0 146 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 UBE2D4Q9Y2X8 147 aa1.47□□□□□ -2.17
SCFD1-207ENST00000544052 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
SCFD1-207ENST00000544052 SPINK6Q6UWN8 80 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 ALKAL2Q6UX46 152 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 SEC11CQ9BY50 192 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 V9GYV3 84 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 I3L3M4 83 aa1.46□□□□□ -2.18
SCFD1-207ENST00000544052 BAALC-AS2P0C853 105 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 1251.4 ms