RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
RTN3-213ENST00000543552 MUSTN1Q8IVN3 82 aa7.16□□□□□ -1.26
RTN3-213ENST00000543552 ATOH7Q8N100 152 aa7.16□□□□□ -1.26
RTN3-213ENST00000543552 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 F8WEM9 126 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 VAMP3Q15836 100 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 PCOTHQ58A44 107 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 PCP2Q8IVA1 136 aa7.14□□□□□ -1.27
RTN3-213ENST00000543552 TCL1BO95988 128 aa7.13□□□□□ -1.27
RTN3-213ENST00000543552 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
RTN3-213ENST00000543552 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
RTN3-213ENST00000543552 C1orf195Q5TG92 126 aa7.11□□□□□ -1.27
RTN3-213ENST00000543552 HIST1H2BLQ99880 126 aa7.11□□□□□ -1.27
RTN3-213ENST00000543552 VPS25Q9BRG1 176 aa7.09□□□□□ -1.27
RTN3-213ENST00000543552 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
RTN3-213ENST00000543552 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
RTN3-213ENST00000543552 UBE2V1Q13404 147 aa7.08□□□□□ -1.28
RTN3-213ENST00000543552 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
RTN3-213ENST00000543552 Q6JHZ5 121 aa7.07□□□□□ -1.28
RTN3-213ENST00000543552 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
RTN3-213ENST00000543552 LINC00575Q6W349 94 aa7.06□□□□□ -1.28
RTN3-213ENST00000543552 A0A0G2JQZ4 141 aa7.05□□□□□ -1.28
RTN3-213ENST00000543552 hADV29S1A0JD25 119 aa7.05□□□□□ -1.28
RTN3-213ENST00000543552 Q6ZQY7 126 aa7.05□□□□□ -1.28
RTN3-213ENST00000543552 CLEC2BQ92478 149 aa7.05□□□□□ -1.28
RTN3-213ENST00000543552 K7ERU9 68 aa7.04□□□□□ -1.28
RTN3-213ENST00000543552 KRTAP19-2Q3LHN2 52 aa7.04□□□□□ -1.28
RTN3-213ENST00000543552 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
RTN3-213ENST00000543552 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
RTN3-213ENST00000543552 A0A1B0GV72 72 aa7.03□□□□□ -1.28
RTN3-213ENST00000543552 MT1HP80294 61 aa7.03□□□□□ -1.28
RTN3-213ENST00000543552 PPDPFLQ8WWR9 84 aa7.03□□□□□ -1.28
RTN3-213ENST00000543552 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
RTN3-213ENST00000543552 OCIAD2Q56VL3 154 aa7.01□□□□□ -1.29
RTN3-213ENST00000543552 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
RTN3-213ENST00000543552 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
RTN3-213ENST00000543552 SCGB1D1O95968 90 aa7□□□□□ -1.29
RTN3-213ENST00000543552 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
RTN3-213ENST00000543552 HIST1H4GQ99525 98 aa7□□□□□ -1.29
RTN3-213ENST00000543552 SNCGO76070 127 aa6.99□□□□□ -1.29
RTN3-213ENST00000543552 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
RTN3-213ENST00000543552 M0R2T5 61 aa6.97□□□□□ -1.29
RTN3-213ENST00000543552 MTURNQ8N3F0 131 aa6.97□□□□□ -1.29
RTN3-213ENST00000543552 SS18L2Q9UHA2 77 aa6.95□□□□□ -1.3
RTN3-213ENST00000543552 LST1O00453 97 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 COX8AP10176 69 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 BATFQ16520 125 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 UQCR10Q9UDW1 63 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 CRCT1Q9UGL9 99 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 FSIP2Q5CZC0 6907 aa6.94□□□□□ -1.3
RTN3-213ENST00000543552 Q75L30 129 aa6.93□□□□□ -1.3
RTN3-213ENST00000543552 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
RTN3-213ENST00000543552 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
RTN3-213ENST00000543552 VAMP8Q9BV40 100 aa6.93□□□□□ -1.3
RTN3-213ENST00000543552 H0YGX0 51 aa6.91□□□□□ -1.3
RTN3-213ENST00000543552 H3BUT2 72 aa6.91□□□□□ -1.3
RTN3-213ENST00000543552 GHRHP01286 108 aa6.91□□□□□ -1.3
RTN3-213ENST00000543552 LORP23490 312 aaPredicted RBP6.91□□□□□ -1.3
RTN3-213ENST00000543552 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
RTN3-213ENST00000543552 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
RTN3-213ENST00000543552 Q6Q795 121 aa6.89□□□□□ -1.31
RTN3-213ENST00000543552 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
RTN3-213ENST00000543552 CFC1P0CG37 223 aa6.88□□□□□ -1.31
RTN3-213ENST00000543552 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
RTN3-213ENST00000543552 Q96NJ1 140 aa6.87□□□□□ -1.31
RTN3-213ENST00000543552 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
RTN3-213ENST00000543552 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
RTN3-213ENST00000543552 A0A1B0GX51 115 aa6.85□□□□□ -1.31
RTN3-213ENST00000543552 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
RTN3-213ENST00000543552 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
RTN3-213ENST00000543552 H3BMG7 143 aa6.83□□□□□ -1.32
RTN3-213ENST00000543552 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
RTN3-213ENST00000543552 A0A087WSZ3 146 aa6.82□□□□□ -1.32
RTN3-213ENST00000543552 FABP2P12104 132 aa6.82□□□□□ -1.32
RTN3-213ENST00000543552 FAM218AQ96MZ4 157 aa6.82□□□□□ -1.32
RTN3-213ENST00000543552 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
RTN3-213ENST00000543552 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
RTN3-213ENST00000543552 GTF2H5Q6ZYL4 71 aa6.81□□□□□ -1.32
RTN3-213ENST00000543552 CEND1Q8N111 149 aa6.81□□□□□ -1.32
RTN3-213ENST00000543552 TRBV20-1A0A075B6N2 111 aa6.8□□□□□ -1.32
RTN3-213ENST00000543552 A8MUU9 505 aa6.79□□□□□ -1.32
RTN3-213ENST00000543552 H3BQ85 93 aa6.79□□□□□ -1.32
RTN3-213ENST00000543552 TAX1BP3O14907 124 aa6.79□□□□□ -1.32
RTN3-213ENST00000543552 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
RTN3-213ENST00000543552 DNAL4O96015 105 aa6.78□□□□□ -1.32
RTN3-213ENST00000543552 J3QR89 54 aa6.76□□□□□ -1.33
RTN3-213ENST00000543552 TRIAP1O43715 76 aa6.75□□□□□ -1.33
RTN3-213ENST00000543552 HSD52Q0P140 79 aa6.75□□□□□ -1.33
RTN3-213ENST00000543552 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
RTN3-213ENST00000543552 DSCR10P59022 87 aa6.74□□□□□ -1.33
RTN3-213ENST00000543552 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
RTN3-213ENST00000543552 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
RTN3-213ENST00000543552 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
RTN3-213ENST00000543552 COX6CP09669 75 aa6.73□□□□□ -1.33
RTN3-213ENST00000543552 FXYD2P54710 66 aa6.73□□□□□ -1.33
RTN3-213ENST00000543552 K7EP34 96 aa6.72□□□□□ -1.33
RTN3-213ENST00000543552 TMEM256-PLSCR3K7ERE1 68 aa6.72□□□□□ -1.33
RTN3-213ENST00000543552 IGKV4-1P06312 121 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms