RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MUC3AQ02505 3323 aa3.54□□□□□ -1.84
XRCC4-206ENST00000542685 DCHS2Q6V1P9 2916 aa3.54□□□□□ -1.84
XRCC4-206ENST00000542685 PRRC2CQ9Y520 2896 aaKnown RBP3.53□□□□□ -1.84
XRCC4-206ENST00000542685 ACYP2P14621 99 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 LELP1Q5T871 98 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 Q6ZRX8 168 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 WFDC10BQ8IUB3 73 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 C7orf33Q8WU49 177 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 CSMD1Q96PZ7 3565 aa3.53□□□□□ -1.84
XRCC4-206ENST00000542685 A0A1B0GU69 56 aa3.52□□□□□ -1.85
XRCC4-206ENST00000542685 UNQ6190/PRO20217Q6UXQ8 127 aa3.52□□□□□ -1.85
XRCC4-206ENST00000542685 BOD1L1Q8NFC6 3051 aa3.52□□□□□ -1.85
XRCC4-206ENST00000542685 MGAQ8IWI9 3026 aa3.52□□□□□ -1.85
XRCC4-206ENST00000542685 ZNF861PO60384 105 aa3.51□□□□□ -1.85
XRCC4-206ENST00000542685 SPRR1AP35321 89 aa3.51□□□□□ -1.85
XRCC4-206ENST00000542685 C6orf48Q9UBA6 75 aa3.51□□□□□ -1.85
XRCC4-206ENST00000542685 TLN1Q9Y490 2541 aaKnown RBP3.5□□□□□ -1.85
XRCC4-206ENST00000542685 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
XRCC4-206ENST00000542685 H3BNG1 76 aa3.5□□□□□ -1.85
XRCC4-206ENST00000542685 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
XRCC4-206ENST00000542685 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
XRCC4-206ENST00000542685 DEFB113Q30KQ7 82 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 AKAP13Q12802 2813 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 BDP1A6H8Y1 2624 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 ATMQ13315 3056 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 ZNF292O60281 2723 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 ASPMQ8IZT6 3477 aa3.49□□□□□ -1.85
XRCC4-206ENST00000542685 KMT2BQ9UMN6 2715 aaPredicted RBP3.48□□□□□ -1.85
XRCC4-206ENST00000542685 MMP24-AS1A0A0U1RRL7 71 aa3.48□□□□□ -1.85
XRCC4-206ENST00000542685 KRTAP4-16G5E9R7 235 aaPredicted RBP3.48□□□□□ -1.85
XRCC4-206ENST00000542685 TACC2O95359 2948 aa3.48□□□□□ -1.85
XRCC4-206ENST00000542685 SPTA1P02549 2419 aa3.48□□□□□ -1.85
XRCC4-206ENST00000542685 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 DEFB130BP0DP73 79 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 DEFB130AP0DP74 79 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 CLPSL2Q6UWE3 100 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 DEFB105AQ8NG35 78 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 SPTAN1Q13813 2472 aaKnown RBP3.47□□□□□ -1.85
XRCC4-206ENST00000542685 AKAP6Q13023 2319 aa3.47□□□□□ -1.85
XRCC4-206ENST00000542685 LRBAP50851 2863 aa3.46□□□□□ -1.85
XRCC4-206ENST00000542685 DMXL1Q9Y485 3027 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 LINC00483Q53H64 154 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 PCOTHQ58A44 107 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 KRTAP26-1Q6PEX3 210 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 IGFL1Q6UW32 110 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 LINC00472Q9H8W2 130 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 WNK1Q9H4A3 2382 aa3.46□□□□□ -1.86
XRCC4-206ENST00000542685 GVINP1Q7Z2Y8 2422 aa3.45□□□□□ -1.86
XRCC4-206ENST00000542685 A0A096LPF7 62 aa3.44□□□□□ -1.86
XRCC4-206ENST00000542685 CELSR1Q9NYQ6 3014 aa3.43□□□□□ -1.86
XRCC4-206ENST00000542685 NUPR2A6NF83 97 aa3.43□□□□□ -1.86
XRCC4-206ENST00000542685 SPART-AS1P0CW21 52 aa3.43□□□□□ -1.86
XRCC4-206ENST00000542685 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
XRCC4-206ENST00000542685 C15orf56Q8N910 161 aa3.43□□□□□ -1.86
XRCC4-206ENST00000542685 K7ERS5 55 aa3.42□□□□□ -1.86
XRCC4-206ENST00000542685 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
XRCC4-206ENST00000542685 SPRR1BP22528 89 aa3.42□□□□□ -1.86
XRCC4-206ENST00000542685 CSPG4Q6UVK1 2322 aa3.42□□□□□ -1.86
XRCC4-206ENST00000542685 A8MUU9 505 aa3.41□□□□□ -1.86
XRCC4-206ENST00000542685 P0C880 135 aa3.41□□□□□ -1.86
XRCC4-206ENST00000542685 RPL37AP61513 92 aaKnown RBP3.41□□□□□ -1.86
XRCC4-206ENST00000542685 LINC01556Q5JQF7 62 aa3.41□□□□□ -1.86
XRCC4-206ENST00000542685 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
XRCC4-206ENST00000542685 ANAPC11Q9NYG5 84 aa3.41□□□□□ -1.86
XRCC4-206ENST00000542685 FAM168BA1KXE4 195 aa3.4□□□□□ -1.87
XRCC4-206ENST00000542685 DOPEY1Q5JWR5 2465 aa3.4□□□□□ -1.87
XRCC4-206ENST00000542685 MRPL34Q9BQ48 92 aaKnown RBP3.4□□□□□ -1.87
XRCC4-206ENST00000542685 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
XRCC4-206ENST00000542685 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
XRCC4-206ENST00000542685 RELNP78509 3460 aa3.38□□□□□ -1.87
XRCC4-206ENST00000542685 LY6G6CO95867 125 aa3.38□□□□□ -1.87
XRCC4-206ENST00000542685 DEFB135Q30KP9 77 aa3.38□□□□□ -1.87
XRCC4-206ENST00000542685 RIF1Q5UIP0 2472 aaKnown RBP3.38□□□□□ -1.87
XRCC4-206ENST00000542685 MUC6Q6W4X9 2439 aa3.38□□□□□ -1.87
XRCC4-206ENST00000542685 Q5W150 140 aa3.37□□□□□ -1.87
XRCC4-206ENST00000542685 LAMA5O15230 3695 aa3.37□□□□□ -1.87
XRCC4-206ENST00000542685 CREBBPQ92793 2442 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 TTC28Q96AY4 2481 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 ALMS1Q8TCU4 4167 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 A0A1B0GVX0 72 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 CEP295Q9C0D2 2601 aa3.36□□□□□ -1.87
XRCC4-206ENST00000542685 VPS13CQ709C8 3753 aa3.35□□□□□ -1.87
XRCC4-206ENST00000542685 SVEP1Q4LDE5 3571 aa3.35□□□□□ -1.87
XRCC4-206ENST00000542685 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
XRCC4-206ENST00000542685 NBASA2RRP1 2371 aa3.33□□□□□ -1.88
XRCC4-206ENST00000542685 ANKRD17O75179 2603 aaKnown RBP3.33□□□□□ -1.88
XRCC4-206ENST00000542685 LINC00304Q8N9R0 145 aa3.33□□□□□ -1.88
XRCC4-206ENST00000542685 ASH1LQ9NR48 2969 aaKnown RBP3.33□□□□□ -1.88
XRCC4-206ENST00000542685 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
XRCC4-206ENST00000542685 ZFHX2Q9C0A1 2572 aaPredicted RBP3.31□□□□□ -1.88
XRCC4-206ENST00000542685 DEFB4AO15263 64 aa3.31□□□□□ -1.88
XRCC4-206ENST00000542685 HTN3P15516 51 aa3.31□□□□□ -1.88
XRCC4-206ENST00000542685 Q96NJ1 140 aa3.31□□□□□ -1.88
XRCC4-206ENST00000542685 IGF2RP11717 2491 aa3.31□□□□□ -1.88
XRCC4-206ENST00000542685 C2CD3Q4AC94 2353 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms