RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 KRTAP13-1Q8IUC0 172 aa10.61□□□□□ -0.71
TMEM50B-210ENST00000542230 UBL5Q9BZL1 73 aa10.61□□□□□ -0.71
TMEM50B-210ENST00000542230 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
TMEM50B-210ENST00000542230 A0A1W2PNM2 257 aa10.6□□□□□ -0.71
TMEM50B-210ENST00000542230 C1orf137Q5JT78 98 aa10.6□□□□□ -0.71
TMEM50B-210ENST00000542230 FAM236AA0A1B0GUQ0 79 aa10.59□□□□□ -0.71
TMEM50B-210ENST00000542230 FAM236BA0A1B0GV22 79 aa10.59□□□□□ -0.71
TMEM50B-210ENST00000542230 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
TMEM50B-210ENST00000542230 KMT2CQ8NEZ4 4911 aaKnown RBP10.58□□□□□ -0.72
TMEM50B-210ENST00000542230 H0Y9J4 135 aa10.58□□□□□ -0.72
TMEM50B-210ENST00000542230 IMUPQ9GZP8 106 aa10.58□□□□□ -0.72
TMEM50B-210ENST00000542230 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
TMEM50B-210ENST00000542230 HIST1H4AP62805 103 aaKnown RBP10.55□□□□□ -0.72
TMEM50B-210ENST00000542230 ANAPC13Q9BS18 74 aa10.55□□□□□ -0.72
TMEM50B-210ENST00000542230 KRTAP10-1P60331 282 aa10.54□□□□□ -0.72
TMEM50B-210ENST00000542230 IGFL1Q6UW32 110 aa10.53□□□□□ -0.72
TMEM50B-210ENST00000542230 CIRBP-AS1Q8TBR5 109 aa10.53□□□□□ -0.72
TMEM50B-210ENST00000542230 Q8NBF4 154 aa10.51□□□□□ -0.73
TMEM50B-210ENST00000542230 F8WEM9 126 aa10.5□□□□□ -0.73
TMEM50B-210ENST00000542230 RYR2Q92736 4967 aa10.5□□□□□ -0.73
TMEM50B-210ENST00000542230 ANAPC11Q9NYG5 84 aa10.5□□□□□ -0.73
TMEM50B-210ENST00000542230 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
TMEM50B-210ENST00000542230 Q8N9L7 120 aa10.48□□□□□ -0.73
TMEM50B-210ENST00000542230 SPRR1BP22528 89 aa10.48□□□□□ -0.73
TMEM50B-210ENST00000542230 NREPQ16612 68 aa10.47□□□□□ -0.73
TMEM50B-210ENST00000542230 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
TMEM50B-210ENST00000542230 SPRR4Q96PI1 79 aa10.46□□□□□ -0.74
TMEM50B-210ENST00000542230 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
TMEM50B-210ENST00000542230 DYNC1H1Q14204 4646 aaKnown RBP10.44□□□□□ -0.74
TMEM50B-210ENST00000542230 CCDC179H3BU77 68 aa10.44□□□□□ -0.74
TMEM50B-210ENST00000542230 ZNF861PO60384 105 aa10.43□□□□□ -0.74
TMEM50B-210ENST00000542230 CRYGAP11844 174 aa10.43□□□□□ -0.74
TMEM50B-210ENST00000542230 Q6ZSA8 131 aa10.43□□□□□ -0.74
TMEM50B-210ENST00000542230 IGLV9-49A0A0B4J1Y8 123 aa10.42□□□□□ -0.74
TMEM50B-210ENST00000542230 CXCL6P80162 114 aa10.42□□□□□ -0.74
TMEM50B-210ENST00000542230 LCE6AA0A183 80 aa10.4□□□□□ -0.74
TMEM50B-210ENST00000542230 A0A087WSZ3 146 aa10.4□□□□□ -0.74
TMEM50B-210ENST00000542230 BPY2O14599 106 aa10.4□□□□□ -0.74
TMEM50B-210ENST00000542230 DEFB116Q30KQ4 102 aa10.4□□□□□ -0.74
TMEM50B-210ENST00000542230 IGLV7-43P04211 117 aa10.39□□□□□ -0.75
TMEM50B-210ENST00000542230 LINC00483Q53H64 154 aa10.37□□□□□ -0.75
TMEM50B-210ENST00000542230 C9orf153Q5TBE3 101 aa10.36□□□□□ -0.75
TMEM50B-210ENST00000542230 IGKV4-1P06312 121 aa10.34□□□□□ -0.75
TMEM50B-210ENST00000542230 A0A1B0GW54 56 aa10.33□□□□□ -0.76
TMEM50B-210ENST00000542230 HRCT1Q6UXD1 115 aa10.33□□□□□ -0.76
TMEM50B-210ENST00000542230 ATOX1O00244 68 aa10.32□□□□□ -0.76
TMEM50B-210ENST00000542230 DSCR10P59022 87 aa10.32□□□□□ -0.76
TMEM50B-210ENST00000542230 MOBPQ13875 183 aa10.32□□□□□ -0.76
TMEM50B-210ENST00000542230 FAT1Q14517 4588 aa10.31□□□□□ -0.76
TMEM50B-210ENST00000542230 RYR3Q15413 4870 aa10.31□□□□□ -0.76
TMEM50B-210ENST00000542230 APOBP04114 4563 aaKnown RBP10.29□□□□□ -0.76
TMEM50B-210ENST00000542230 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
TMEM50B-210ENST00000542230 K7EQZ3 153 aa10.28□□□□□ -0.76
TMEM50B-210ENST00000542230 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
TMEM50B-210ENST00000542230 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
TMEM50B-210ENST00000542230 COX7CP15954 63 aa10.25□□□□□ -0.77
TMEM50B-210ENST00000542230 SERP2Q8N6R1 65 aa10.24□□□□□ -0.77
TMEM50B-210ENST00000542230 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
TMEM50B-210ENST00000542230 UQCRQO14949 82 aa10.22□□□□□ -0.77
TMEM50B-210ENST00000542230 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
TMEM50B-210ENST00000542230 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
TMEM50B-210ENST00000542230 A0A087X002 238 aa10.21□□□□□ -0.77
TMEM50B-210ENST00000542230 SMR3BP02814 79 aaPredicted RBP10.21□□□□□ -0.78
TMEM50B-210ENST00000542230 Q96NJ1 140 aa10.16□□□□□ -0.78
TMEM50B-210ENST00000542230 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
TMEM50B-210ENST00000542230 KRTAP1-4P0C5Y4 121 aa10.14□□□□□ -0.79
TMEM50B-210ENST00000542230 TRAV7A0A075B6U4 112 aa10.12□□□□□ -0.79
TMEM50B-210ENST00000542230 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
TMEM50B-210ENST00000542230 C20orf197Q8N268 126 aa10.1□□□□□ -0.79
TMEM50B-210ENST00000542230 OCR1Q9BZK8 76 aa10.1□□□□□ -0.79
TMEM50B-210ENST00000542230 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
TMEM50B-210ENST00000542230 HCG22E2RYF7 251 aa10.09□□□□□ -0.79
TMEM50B-210ENST00000542230 A8MWP4 228 aa10.08□□□□□ -0.8
TMEM50B-210ENST00000542230 PRR15Q8IV56 129 aa10.08□□□□□ -0.8
TMEM50B-210ENST00000542230 SNURFQ9Y675 71 aa10.07□□□□□ -0.8
TMEM50B-210ENST00000542230 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
TMEM50B-210ENST00000542230 SSBP3-AS1Q7Z2R9 100 aa10.04□□□□□ -0.8
TMEM50B-210ENST00000542230 SPINK6Q6UWN8 80 aa10.03□□□□□ -0.8
TMEM50B-210ENST00000542230 SMIM20Q8N5G0 67 aa10.03□□□□□ -0.8
TMEM50B-210ENST00000542230 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
TMEM50B-210ENST00000542230 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
TMEM50B-210ENST00000542230 FAM229BQ4G0N7 80 aa10.01□□□□□ -0.81
TMEM50B-210ENST00000542230 HSPG2P98160 4391 aa10.01□□□□□ -0.81
TMEM50B-210ENST00000542230 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
TMEM50B-210ENST00000542230 MMP24-AS1A0A0U1RRL7 71 aa9.99□□□□□ -0.81
TMEM50B-210ENST00000542230 J3KT08 172 aa9.99□□□□□ -0.81
TMEM50B-210ENST00000542230 CASC2Q6XLA1 102 aa9.99□□□□□ -0.81
TMEM50B-210ENST00000542230 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
TMEM50B-210ENST00000542230 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
TMEM50B-210ENST00000542230 CD164Q04900 197 aa9.96□□□□□ -0.81
TMEM50B-210ENST00000542230 TMEM254Q8TBM7 123 aa9.96□□□□□ -0.82
TMEM50B-210ENST00000542230 NDUFB1O75438 58 aa9.95□□□□□ -0.82
TMEM50B-210ENST00000542230 EPPK1P58107 5090 aaKnown RBP9.94□□□□□ -0.82
TMEM50B-210ENST00000542230 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
TMEM50B-210ENST00000542230 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
TMEM50B-210ENST00000542230 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
TMEM50B-210ENST00000542230 TYMSOSQ8TAI1 123 aa9.93□□□□□ -0.82
TMEM50B-210ENST00000542230 RYR1P21817 5038 aa9.92□□□□□ -0.82
TMEM50B-210ENST00000542230 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
TMEM50B-210ENST00000542230 hDV103S1A0JD37 113 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms