RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
NKRF-204ENST00000542113 H3BPC8 53 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 SPRR1BP22528 89 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
NKRF-204ENST00000542113 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.28□□□□□ -1.72
NKRF-204ENST00000542113 A0A087WSZ3 146 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 PRLHP81277 87 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 K7EIL1 84 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 B9D2Q9BPU9 175 aa4.28□□□□□ -1.72
NKRF-204ENST00000542113 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
NKRF-204ENST00000542113 A0A1W2PNN7 141 aa4.26□□□□□ -1.73
NKRF-204ENST00000542113 LYSTQ99698 3801 aa4.26□□□□□ -1.73
NKRF-204ENST00000542113 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
NKRF-204ENST00000542113 LINC00336Q6ZUF6 198 aa4.25□□□□□ -1.73
NKRF-204ENST00000542113 A8MWP4 228 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 WFDC13Q8IUB5 93 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 C9orf163Q8N9P6 203 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 CASC2Q6XLA1 102 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 V9GYY9 64 aa4.24□□□□□ -1.73
NKRF-204ENST00000542113 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 KRTAP1-5Q9BYS1 174 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 DNAH3Q8TD57 4116 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 PHF5AQ7RTV0 110 aaKnown RBP4.23□□□□□ -1.73
NKRF-204ENST00000542113 SPANXA2-OT1Q8N9U9 137 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 APLNQ9ULZ1 77 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 TRAV22A0A0B4J277 110 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
NKRF-204ENST00000542113 RPL37AP61513 92 aaKnown RBP4.23□□□□□ -1.73
NKRF-204ENST00000542113 FAM229BQ4G0N7 80 aa4.23□□□□□ -1.73
NKRF-204ENST00000542113 Q1T7F1 81 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 C1orf64Q8NEQ6 169 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 A0A0G2JQZ4 141 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 H0Y9P7 68 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 BRK1Q8WUW1 75 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
NKRF-204ENST00000542113 DNAH1Q9P2D7 4330 aa4.21□□□□□ -1.73
NKRF-204ENST00000542113 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
NKRF-204ENST00000542113 DEFB116Q30KQ4 102 aa4.21□□□□□ -1.74
NKRF-204ENST00000542113 ZNF706Q9Y5V0 76 aaPredicted RBP4.21□□□□□ -1.74
NKRF-204ENST00000542113 NUPR2A6NF83 97 aa4.2□□□□□ -1.74
NKRF-204ENST00000542113 NBDYA0A0U1RRE5 68 aa4.2□□□□□ -1.74
NKRF-204ENST00000542113 CHTF8P0CG12 524 aa4.2□□□□□ -1.74
NKRF-204ENST00000542113 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
NKRF-204ENST00000542113 MOBPQ13875 183 aa4.19□□□□□ -1.74
NKRF-204ENST00000542113 LRCOL1A6NCL2 159 aa4.19□□□□□ -1.74
NKRF-204ENST00000542113 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
NKRF-204ENST00000542113 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
NKRF-204ENST00000542113 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
NKRF-204ENST00000542113 C1orf195Q5TG92 126 aa4.17□□□□□ -1.74
NKRF-204ENST00000542113 KRTAP11-1Q8IUC1 163 aa4.17□□□□□ -1.74
NKRF-204ENST00000542113 HUWE1Q7Z6Z7 4374 aaKnown RBP4.17□□□□□ -1.74
NKRF-204ENST00000542113 MMP24-AS1A0A0U1RRL7 71 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 CDK2AP2O75956 126 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 LINC00483Q53H64 154 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 SPACA4Q8TDM5 124 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 PRR4Q16378 134 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 MDFIQ99750 246 aa4.16□□□□□ -1.74
NKRF-204ENST00000542113 Q6ZRN7 208 aaPredicted RBP4.15□□□□□ -1.74
NKRF-204ENST00000542113 LIMD2Q9BT23 127 aa4.15□□□□□ -1.74
NKRF-204ENST00000542113 TGP01266 2768 aa4.14□□□□□ -1.75
NKRF-204ENST00000542113 IGLV9-49A0A0B4J1Y8 123 aa4.14□□□□□ -1.75
NKRF-204ENST00000542113 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
NKRF-204ENST00000542113 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
NKRF-204ENST00000542113 ASB16-AS1Q495Z4 193 aa4.13□□□□□ -1.75
NKRF-204ENST00000542113 A0A1B0GVX0 72 aa4.12□□□□□ -1.75
NKRF-204ENST00000542113 A0A087WTM6 91 aa4.12□□□□□ -1.75
NKRF-204ENST00000542113 Q96NJ1 140 aa4.12□□□□□ -1.75
NKRF-204ENST00000542113 Q6ZR54 194 aa4.11□□□□□ -1.75
NKRF-204ENST00000542113 IGLV5-52A0A0A0MRZ9 124 aa4.11□□□□□ -1.75
NKRF-204ENST00000542113 PSPHP1O15172 72 aa4.11□□□□□ -1.75
NKRF-204ENST00000542113 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.11□□□□□ -1.75
NKRF-204ENST00000542113 PANO1I0J062 215 aa4.11□□□□□ -1.75
NKRF-204ENST00000542113 ZNF861PO60384 105 aa4.11□□□□□ -1.75
NKRF-204ENST00000542113 RTL8CO15255 209 aa4.1□□□□□ -1.75
NKRF-204ENST00000542113 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
NKRF-204ENST00000542113 MRPL34Q9BQ48 92 aaKnown RBP4.1□□□□□ -1.75
NKRF-204ENST00000542113 PLAC8Q9NZF1 115 aa4.1□□□□□ -1.75
NKRF-204ENST00000542113 NDUFS5O43920 106 aa4.1□□□□□ -1.75
NKRF-204ENST00000542113 COA5Q86WW8 74 aa4.1□□□□□ -1.75
NKRF-204ENST00000542113 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
NKRF-204ENST00000542113 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.75
NKRF-204ENST00000542113 PSORS1C2Q9UIG4 136 aa4.09□□□□□ -1.75
NKRF-204ENST00000542113 A8MUN3 132 aa4.09□□□□□ -1.76
NKRF-204ENST00000542113 DYNC2H1Q8NCM8 4307 aaKnown RBP4.09□□□□□ -1.76
NKRF-204ENST00000542113 CD164Q04900 197 aa4.08□□□□□ -1.76
NKRF-204ENST00000542113 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
NKRF-204ENST00000542113 Q5VV11 94 aa4.07□□□□□ -1.76
NKRF-204ENST00000542113 PRR15LQ9BU68 103 aa4.07□□□□□ -1.76
NKRF-204ENST00000542113 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
NKRF-204ENST00000542113 C8orf87E5RJ46 101 aa4.06□□□□□ -1.76
NKRF-204ENST00000542113 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
NKRF-204ENST00000542113 DNAH7Q8WXX0 4024 aa4.06□□□□□ -1.76
NKRF-204ENST00000542113 Q75L30 129 aa4.06□□□□□ -1.76
NKRF-204ENST00000542113 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
NKRF-204ENST00000542113 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
NKRF-204ENST00000542113 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
NKRF-204ENST00000542113 C1orf134Q5TEV5 83 aa4.04□□□□□ -1.76
NKRF-204ENST00000542113 PMAIP1Q13794 54 aa4.03□□□□□ -1.76
NKRF-204ENST00000542113 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms