RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 B9D2Q9BPU9 175 aa6.26□□□□□ -1.41
LMO3-227ENST00000541764 A0A1W2PNN7 141 aa6.24□□□□□ -1.41
LMO3-227ENST00000541764 C3orf84H3BNL1 204 aa6.24□□□□□ -1.41
LMO3-227ENST00000541764 OCR1Q9BZK8 76 aa6.24□□□□□ -1.41
LMO3-227ENST00000541764 NOTCH1P46531 2555 aa6.24□□□□□ -1.41
LMO3-227ENST00000541764 EPM2AB3EWF7 344 aa6.23□□□□□ -1.41
LMO3-227ENST00000541764 PSCAO43653 123 aa6.23□□□□□ -1.41
LMO3-227ENST00000541764 SPRR1BP22528 89 aa6.23□□□□□ -1.41
LMO3-227ENST00000541764 UBE2DNLQ8IWF7 75 aa6.23□□□□□ -1.41
LMO3-227ENST00000541764 C9orf163Q8N9P6 203 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 NBEAL1Q6ZS30 2694 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 LRCOL1A6NCL2 159 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 F8WEM9 126 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 LINC00476Q8WZB0 136 aa6.22□□□□□ -1.41
LMO3-227ENST00000541764 COL6A5A8TX70 2615 aa6.21□□□□□ -1.41
LMO3-227ENST00000541764 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
LMO3-227ENST00000541764 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.42
LMO3-227ENST00000541764 LCE6AA0A183 80 aa6.2□□□□□ -1.42
LMO3-227ENST00000541764 NUPR2A6NF83 97 aa6.2□□□□□ -1.42
LMO3-227ENST00000541764 Q8N9L7 120 aa6.2□□□□□ -1.42
LMO3-227ENST00000541764 DNAH10Q8IVF4 4471 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 IGKV2-24A0A0C4DH68 120 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 NBDYA0A0U1RRE5 68 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 DSCR10P59022 87 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 IGFL1Q6UW32 110 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
LMO3-227ENST00000541764 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
LMO3-227ENST00000541764 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
LMO3-227ENST00000541764 OXTP01178 125 aa6.17□□□□□ -1.42
LMO3-227ENST00000541764 PRLHP81277 87 aa6.16□□□□□ -1.42
LMO3-227ENST00000541764 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
LMO3-227ENST00000541764 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
LMO3-227ENST00000541764 KRTAP13-1Q8IUC0 172 aa6.15□□□□□ -1.42
LMO3-227ENST00000541764 VPS13DQ5THJ4 4388 aa6.15□□□□□ -1.42
LMO3-227ENST00000541764 PLECQ15149 4684 aaKnown RBP6.15□□□□□ -1.42
LMO3-227ENST00000541764 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.15□□□□□ -1.43
LMO3-227ENST00000541764 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.43
LMO3-227ENST00000541764 HIGD2AQ9BW72 106 aa6.15□□□□□ -1.43
LMO3-227ENST00000541764 UBE2AP49459 152 aa6.14□□□□□ -1.43
LMO3-227ENST00000541764 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
LMO3-227ENST00000541764 MGAM2Q2M2H8 2515 aa6.13□□□□□ -1.43
LMO3-227ENST00000541764 H3BS24 57 aa6.13□□□□□ -1.43
LMO3-227ENST00000541764 CHTF8P0CG12 524 aa6.13□□□□□ -1.43
LMO3-227ENST00000541764 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
LMO3-227ENST00000541764 K7EQZ3 153 aa6.12□□□□□ -1.43
LMO3-227ENST00000541764 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
LMO3-227ENST00000541764 SPACA4Q8TDM5 124 aa6.11□□□□□ -1.43
LMO3-227ENST00000541764 ZCCHC13Q8WW36 166 aaKnown RBP6.11□□□□□ -1.43
LMO3-227ENST00000541764 A0A087WSZ3 146 aa6.1□□□□□ -1.43
LMO3-227ENST00000541764 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
LMO3-227ENST00000541764 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
LMO3-227ENST00000541764 Q5XG85 94 aa6.09□□□□□ -1.43
LMO3-227ENST00000541764 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
LMO3-227ENST00000541764 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.44
LMO3-227ENST00000541764 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 KRTAP29-1A8MX34 341 aaPredicted RBP6.08□□□□□ -1.44
LMO3-227ENST00000541764 PANO1I0J062 215 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 LINC00483Q53H64 154 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
LMO3-227ENST00000541764 A0A087WTM6 91 aa6.07□□□□□ -1.44
LMO3-227ENST00000541764 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
LMO3-227ENST00000541764 Q6ZR54 194 aa6.07□□□□□ -1.44
LMO3-227ENST00000541764 LYSTQ99698 3801 aa6.07□□□□□ -1.44
LMO3-227ENST00000541764 DNAH17Q9UFH2 4485 aa6.06□□□□□ -1.44
LMO3-227ENST00000541764 KRTAP9-7A8MTY7 169 aa6.06□□□□□ -1.44
LMO3-227ENST00000541764 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
LMO3-227ENST00000541764 A8MWP4 228 aa6.05□□□□□ -1.44
LMO3-227ENST00000541764 H3BPC8 53 aa6.04□□□□□ -1.44
LMO3-227ENST00000541764 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
LMO3-227ENST00000541764 ZNF706Q9Y5V0 76 aaPredicted RBP6.04□□□□□ -1.44
LMO3-227ENST00000541764 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.04□□□□□ -1.44
LMO3-227ENST00000541764 CSMD3Q7Z407 3707 aa6.04□□□□□ -1.44
LMO3-227ENST00000541764 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
LMO3-227ENST00000541764 NDUFB1O75438 58 aa6.02□□□□□ -1.45
LMO3-227ENST00000541764 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
LMO3-227ENST00000541764 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
LMO3-227ENST00000541764 RTL8CO15255 209 aa6.01□□□□□ -1.45
LMO3-227ENST00000541764 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
LMO3-227ENST00000541764 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
LMO3-227ENST00000541764 CYP4F30PQ9H0H9 118 aa6.01□□□□□ -1.45
LMO3-227ENST00000541764 DNAH2Q9P225 4427 aa6□□□□□ -1.45
LMO3-227ENST00000541764 MP68P56378 58 aa6□□□□□ -1.45
LMO3-227ENST00000541764 DEFB116Q30KQ4 102 aa6□□□□□ -1.45
LMO3-227ENST00000541764 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
LMO3-227ENST00000541764 CASC2Q6XLA1 102 aa6□□□□□ -1.45
LMO3-227ENST00000541764 DNAH6Q9C0G6 4158 aa5.99□□□□□ -1.45
LMO3-227ENST00000541764 WFDC13Q8IUB5 93 aa5.99□□□□□ -1.45
LMO3-227ENST00000541764 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
LMO3-227ENST00000541764 ZNF861PO60384 105 aa5.98□□□□□ -1.45
LMO3-227ENST00000541764 Q96NJ1 140 aa5.98□□□□□ -1.45
LMO3-227ENST00000541764 WWC2-AS2Q96NR7 200 aa5.98□□□□□ -1.45
LMO3-227ENST00000541764 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
LMO3-227ENST00000541764 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
LMO3-227ENST00000541764 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.45
LMO3-227ENST00000541764 hDV103S1A0JD37 113 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms