RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 LINC00476Q8WZB0 136 aa9.46□□□□□ -0.9
AC005840.4-201ENST00000541242 LINC00208Q96KT6 92 aa9.46□□□□□ -0.9
AC005840.4-201ENST00000541242 Q5VV11 94 aa9.45□□□□□ -0.9
AC005840.4-201ENST00000541242 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
AC005840.4-201ENST00000541242 C11orf45Q8TAV5 145 aa9.44□□□□□ -0.9
AC005840.4-201ENST00000541242 SPRR1AP35321 89 aa9.43□□□□□ -0.9
AC005840.4-201ENST00000541242 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
AC005840.4-201ENST00000541242 CASC10Q5T4H9 136 aa9.42□□□□□ -0.9
AC005840.4-201ENST00000541242 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
AC005840.4-201ENST00000541242 IGFL1Q6UW32 110 aa9.41□□□□□ -0.9
AC005840.4-201ENST00000541242 MP68P56378 58 aa9.41□□□□□ -0.9
AC005840.4-201ENST00000541242 A0A087WSZ3 146 aa9.4□□□□□ -0.9
AC005840.4-201ENST00000541242 NDUFB1O75438 58 aa9.4□□□□□ -0.9
AC005840.4-201ENST00000541242 HUWE1Q7Z6Z7 4374 aaKnown RBP9.4□□□□□ -0.91
AC005840.4-201ENST00000541242 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
AC005840.4-201ENST00000541242 MRPL55Q7Z7F7 128 aaKnown RBP9.38□□□□□ -0.91
AC005840.4-201ENST00000541242 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
AC005840.4-201ENST00000541242 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
AC005840.4-201ENST00000541242 H0Y9P7 68 aa9.37□□□□□ -0.91
AC005840.4-201ENST00000541242 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
AC005840.4-201ENST00000541242 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
AC005840.4-201ENST00000541242 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
AC005840.4-201ENST00000541242 CSMD3Q7Z407 3707 aa9.35□□□□□ -0.91
AC005840.4-201ENST00000541242 C16orf90A8MZG2 172 aa9.35□□□□□ -0.91
AC005840.4-201ENST00000541242 K7EIL1 84 aa9.34□□□□□ -0.91
AC005840.4-201ENST00000541242 PRLHP81277 87 aa9.34□□□□□ -0.91
AC005840.4-201ENST00000541242 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
AC005840.4-201ENST00000541242 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 SPTSSBQ8NFR3 76 aa9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 KTN1-AS1Q86SY8 53 aa9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 LINC00588Q9Y4M8 146 aa9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 MGAM2Q2M2H8 2515 aa9.33□□□□□ -0.92
AC005840.4-201ENST00000541242 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
AC005840.4-201ENST00000541242 DNAH10OSP0CZ25 163 aa9.32□□□□□ -0.92
AC005840.4-201ENST00000541242 CASC2Q6XLA1 102 aa9.31□□□□□ -0.92
AC005840.4-201ENST00000541242 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
AC005840.4-201ENST00000541242 UBE2AP49459 152 aa9.3□□□□□ -0.92
AC005840.4-201ENST00000541242 CNBPP62633 177 aaKnown RBP9.3□□□□□ -0.92
AC005840.4-201ENST00000541242 LCA10Q71F78 164 aa9.29□□□□□ -0.92
AC005840.4-201ENST00000541242 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
AC005840.4-201ENST00000541242 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
AC005840.4-201ENST00000541242 LIMD2Q9BT23 127 aa9.28□□□□□ -0.92
AC005840.4-201ENST00000541242 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
AC005840.4-201ENST00000541242 TENM2Q9NT68 2774 aa9.27□□□□□ -0.93
AC005840.4-201ENST00000541242 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
AC005840.4-201ENST00000541242 COA5Q86WW8 74 aa9.25□□□□□ -0.93
AC005840.4-201ENST00000541242 IGKV2-24A0A0C4DH68 120 aa9.24□□□□□ -0.93
AC005840.4-201ENST00000541242 A6NED7 52 aa9.24□□□□□ -0.93
AC005840.4-201ENST00000541242 LYSTQ99698 3801 aa9.23□□□□□ -0.93
AC005840.4-201ENST00000541242 A0A096LNI7 61 aa9.23□□□□□ -0.93
AC005840.4-201ENST00000541242 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
AC005840.4-201ENST00000541242 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
AC005840.4-201ENST00000541242 PCOTHQ58A44 107 aa9.22□□□□□ -0.93
AC005840.4-201ENST00000541242 DNAH9Q9NYC9 4486 aa9.22□□□□□ -0.93
AC005840.4-201ENST00000541242 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
AC005840.4-201ENST00000541242 A8MWP4 228 aa9.2□□□□□ -0.94
AC005840.4-201ENST00000541242 H0Y9J4 135 aa9.2□□□□□ -0.94
AC005840.4-201ENST00000541242 H3BPC8 53 aa9.2□□□□□ -0.94
AC005840.4-201ENST00000541242 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
AC005840.4-201ENST00000541242 Q75L30 129 aa9.2□□□□□ -0.94
AC005840.4-201ENST00000541242 A6NN06 94 aa9.19□□□□□ -0.94
AC005840.4-201ENST00000541242 LINC00472Q9H8W2 130 aa9.19□□□□□ -0.94
AC005840.4-201ENST00000541242 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
AC005840.4-201ENST00000541242 SPAG11AQ6PDA7 123 aa9.17□□□□□ -0.94
AC005840.4-201ENST00000541242 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
AC005840.4-201ENST00000541242 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
AC005840.4-201ENST00000541242 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
AC005840.4-201ENST00000541242 NDUFS5O43920 106 aa9.15□□□□□ -0.94
AC005840.4-201ENST00000541242 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
AC005840.4-201ENST00000541242 KRTAP1-5Q9BYS1 174 aa9.14□□□□□ -0.95
AC005840.4-201ENST00000541242 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
AC005840.4-201ENST00000541242 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
AC005840.4-201ENST00000541242 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
AC005840.4-201ENST00000541242 DNAH7Q8WXX0 4024 aa9.1□□□□□ -0.95
AC005840.4-201ENST00000541242 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
AC005840.4-201ENST00000541242 MOBPQ13875 183 aa9.09□□□□□ -0.95
AC005840.4-201ENST00000541242 SPINK7P58062 85 aa9.08□□□□□ -0.96
AC005840.4-201ENST00000541242 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
AC005840.4-201ENST00000541242 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
AC005840.4-201ENST00000541242 PLECQ15149 4684 aaKnown RBP9.07□□□□□ -0.96
AC005840.4-201ENST00000541242 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
AC005840.4-201ENST00000541242 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
AC005840.4-201ENST00000541242 HRES1P13985 223 aa9.03□□□□□ -0.96
AC005840.4-201ENST00000541242 SPRR1BP22528 89 aa9.03□□□□□ -0.96
AC005840.4-201ENST00000541242 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
AC005840.4-201ENST00000541242 Q96NJ1 140 aa9.02□□□□□ -0.97
AC005840.4-201ENST00000541242 MEGF8Q7Z7M0 2845 aa9.01□□□□□ -0.97
AC005840.4-201ENST00000541242 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
AC005840.4-201ENST00000541242 PRKDCP78527 4128 aaKnown RBP9□□□□□ -0.97
AC005840.4-201ENST00000541242 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
AC005840.4-201ENST00000541242 IGHV6-1A0A0B4J1U7 121 aa8.98□□□□□ -0.97
AC005840.4-201ENST00000541242 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
AC005840.4-201ENST00000541242 Q6ZR54 194 aa8.97□□□□□ -0.97
AC005840.4-201ENST00000541242 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
AC005840.4-201ENST00000541242 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
AC005840.4-201ENST00000541242 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.97
AC005840.4-201ENST00000541242 PRR26Q8N8Z3 221 aa8.96□□□□□ -0.98
AC005840.4-201ENST00000541242 A0A087X002 238 aa8.95□□□□□ -0.98
AC005840.4-201ENST00000541242 NOTCH2NLQ7Z3S9 236 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms