RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PKHD1P08F94 4074 aa7.51□□□□□ -1.21
AP003559.1-201ENST00000540906 ACYP1P07311 99 aa7.51□□□□□ -1.21
AP003559.1-201ENST00000540906 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
AP003559.1-201ENST00000540906 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
AP003559.1-201ENST00000540906 DSCR8Q96T75 97 aa7.5□□□□□ -1.21
AP003559.1-201ENST00000540906 GHRHP01286 108 aa7.49□□□□□ -1.21
AP003559.1-201ENST00000540906 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
AP003559.1-201ENST00000540906 C1orf137Q5JT78 98 aa7.48□□□□□ -1.21
AP003559.1-201ENST00000540906 A0A1B0GVY2 172 aa7.47□□□□□ -1.21
AP003559.1-201ENST00000540906 A0A1W2PNM2 257 aa7.45□□□□□ -1.22
AP003559.1-201ENST00000540906 SPRR1BP22528 89 aa7.45□□□□□ -1.22
AP003559.1-201ENST00000540906 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
AP003559.1-201ENST00000540906 PDE6GP18545 87 aa7.43□□□□□ -1.22
AP003559.1-201ENST00000540906 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
AP003559.1-201ENST00000540906 IGKV3D-7A0A0C4DH55 119 aa7.43□□□□□ -1.22
AP003559.1-201ENST00000540906 SPRR4Q96PI1 79 aa7.43□□□□□ -1.22
AP003559.1-201ENST00000540906 APOBP04114 4563 aaKnown RBP7.42□□□□□ -1.22
AP003559.1-201ENST00000540906 ZNF861PO60384 105 aa7.42□□□□□ -1.22
AP003559.1-201ENST00000540906 IGLV7-43P04211 117 aa7.42□□□□□ -1.22
AP003559.1-201ENST00000540906 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
AP003559.1-201ENST00000540906 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
AP003559.1-201ENST00000540906 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.23
AP003559.1-201ENST00000540906 Q6ZVQ6 151 aa7.4□□□□□ -1.23
AP003559.1-201ENST00000540906 VPS13BQ7Z7G8 4022 aa7.4□□□□□ -1.23
AP003559.1-201ENST00000540906 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
AP003559.1-201ENST00000540906 Q6JHZ5 121 aa7.39□□□□□ -1.23
AP003559.1-201ENST00000540906 F8WEM9 126 aa7.38□□□□□ -1.23
AP003559.1-201ENST00000540906 Q8NBF4 154 aa7.38□□□□□ -1.23
AP003559.1-201ENST00000540906 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
AP003559.1-201ENST00000540906 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
AP003559.1-201ENST00000540906 IGLV9-49A0A0B4J1Y8 123 aa7.35□□□□□ -1.23
AP003559.1-201ENST00000540906 PCP4P48539 62 aa7.35□□□□□ -1.23
AP003559.1-201ENST00000540906 Q6Q795 121 aa7.35□□□□□ -1.23
AP003559.1-201ENST00000540906 SCGB1A1P11684 91 aa7.34□□□□□ -1.23
AP003559.1-201ENST00000540906 A0A087WVE0 104 aa7.34□□□□□ -1.24
AP003559.1-201ENST00000540906 C21orf62-AS1Q17RA5 79 aa7.34□□□□□ -1.24
AP003559.1-201ENST00000540906 CRYGAP11844 174 aa7.32□□□□□ -1.24
AP003559.1-201ENST00000540906 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
AP003559.1-201ENST00000540906 FAT1Q14517 4588 aa7.32□□□□□ -1.24
AP003559.1-201ENST00000540906 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
AP003559.1-201ENST00000540906 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
AP003559.1-201ENST00000540906 MOBPQ13875 183 aa7.3□□□□□ -1.24
AP003559.1-201ENST00000540906 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
AP003559.1-201ENST00000540906 NREPQ16612 68 aa7.29□□□□□ -1.24
AP003559.1-201ENST00000540906 A0A087WSZ3 146 aa7.29□□□□□ -1.24
AP003559.1-201ENST00000540906 ATP5EP2Q5VTU8 51 aa7.29□□□□□ -1.24
AP003559.1-201ENST00000540906 Q8N9L7 120 aa7.29□□□□□ -1.24
AP003559.1-201ENST00000540906 FAM236AA0A1B0GUQ0 79 aa7.28□□□□□ -1.24
AP003559.1-201ENST00000540906 FAM236BA0A1B0GV22 79 aa7.28□□□□□ -1.24
AP003559.1-201ENST00000540906 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
AP003559.1-201ENST00000540906 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
AP003559.1-201ENST00000540906 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
AP003559.1-201ENST00000540906 HRCT1Q6UXD1 115 aa7.27□□□□□ -1.25
AP003559.1-201ENST00000540906 A0A087X002 238 aa7.26□□□□□ -1.25
AP003559.1-201ENST00000540906 A0A1B0GW54 56 aa7.26□□□□□ -1.25
AP003559.1-201ENST00000540906 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
AP003559.1-201ENST00000540906 CXCL6P80162 114 aa7.26□□□□□ -1.25
AP003559.1-201ENST00000540906 DEFB116Q30KQ4 102 aa7.26□□□□□ -1.25
AP003559.1-201ENST00000540906 BPY2O14599 106 aa7.25□□□□□ -1.25
AP003559.1-201ENST00000540906 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
AP003559.1-201ENST00000540906 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
AP003559.1-201ENST00000540906 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
AP003559.1-201ENST00000540906 IGKV4-1P06312 121 aa7.23□□□□□ -1.25
AP003559.1-201ENST00000540906 DSCR10P59022 87 aa7.23□□□□□ -1.25
AP003559.1-201ENST00000540906 RYR1P21817 5038 aa7.23□□□□□ -1.25
AP003559.1-201ENST00000540906 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
AP003559.1-201ENST00000540906 HSPG2P98160 4391 aa7.21□□□□□ -1.26
AP003559.1-201ENST00000540906 ANAPC13Q9BS18 74 aa7.2□□□□□ -1.26
AP003559.1-201ENST00000540906 LINC00472Q9H8W2 130 aa7.19□□□□□ -1.26
AP003559.1-201ENST00000540906 Q96NJ1 140 aa7.18□□□□□ -1.26
AP003559.1-201ENST00000540906 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
AP003559.1-201ENST00000540906 K7EQZ3 153 aa7.17□□□□□ -1.26
AP003559.1-201ENST00000540906 FAM229BQ4G0N7 80 aa7.16□□□□□ -1.26
AP003559.1-201ENST00000540906 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.26
AP003559.1-201ENST00000540906 SSBP3-AS1Q7Z2R9 100 aa7.15□□□□□ -1.27
AP003559.1-201ENST00000540906 CCDC179H3BU77 68 aa7.13□□□□□ -1.27
AP003559.1-201ENST00000540906 PLA2G1BP04054 148 aaKnown RBP7.13□□□□□ -1.27
AP003559.1-201ENST00000540906 CDK2AP2O75956 126 aa7.13□□□□□ -1.27
AP003559.1-201ENST00000540906 ATOX1O00244 68 aa7.12□□□□□ -1.27
AP003559.1-201ENST00000540906 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
AP003559.1-201ENST00000540906 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
AP003559.1-201ENST00000540906 HERC2O95714 4834 aa7.09□□□□□ -1.27
AP003559.1-201ENST00000540906 CD164Q04900 197 aa7.08□□□□□ -1.28
AP003559.1-201ENST00000540906 A8MWP4 228 aa7.08□□□□□ -1.28
AP003559.1-201ENST00000540906 PRR15Q8IV56 129 aa7.07□□□□□ -1.28
AP003559.1-201ENST00000540906 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
AP003559.1-201ENST00000540906 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
AP003559.1-201ENST00000540906 Q5VSD8 79 aa7.06□□□□□ -1.28
AP003559.1-201ENST00000540906 WFDC13Q8IUB5 93 aa7.05□□□□□ -1.28
AP003559.1-201ENST00000540906 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
AP003559.1-201ENST00000540906 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 HCG22E2RYF7 251 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 COX7CP15954 63 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 ABCA13Q86UQ4 5058 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 J3KT08 172 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 NOTCH2NLQ7Z3S9 236 aa7.04□□□□□ -1.28
AP003559.1-201ENST00000540906 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
AP003559.1-201ENST00000540906 KRTAP29-1A8MX34 341 aaPredicted RBP7.03□□□□□ -1.28
AP003559.1-201ENST00000540906 J3QL48 77 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms