RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 Q6JHZ5 121 aa6.28□□□□□ -1.4
CBX3P4-202ENST00000540428 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
CBX3P4-202ENST00000540428 C20orf202A1L168 122 aa6.27□□□□□ -1.41
CBX3P4-202ENST00000540428 KRTDAPP60985 99 aa6.27□□□□□ -1.41
CBX3P4-202ENST00000540428 Q75L30 129 aa6.27□□□□□ -1.41
CBX3P4-202ENST00000540428 TRBV7-7A0A0K0K1E9 115 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 VAMP3Q15836 100 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 ATP11AUNQ6ZP68 121 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 PCP2Q8IVA1 136 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 CLEC2BQ92478 149 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 C12orf57Q99622 126 aa6.26□□□□□ -1.41
CBX3P4-202ENST00000540428 LINC00575Q6W349 94 aa6.25□□□□□ -1.41
CBX3P4-202ENST00000540428 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
CBX3P4-202ENST00000540428 Q6ZQY7 126 aa6.23□□□□□ -1.41
CBX3P4-202ENST00000540428 hADV29S1A0JD25 119 aa6.22□□□□□ -1.41
CBX3P4-202ENST00000540428 OCIAD2Q56VL3 154 aa6.22□□□□□ -1.41
CBX3P4-202ENST00000540428 Q6Q795 121 aa6.22□□□□□ -1.41
CBX3P4-202ENST00000540428 HIST3H2BBQ8N257 126 aa6.22□□□□□ -1.41
CBX3P4-202ENST00000540428 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
CBX3P4-202ENST00000540428 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
CBX3P4-202ENST00000540428 CFC1P0CG37 223 aa6.2□□□□□ -1.42
CBX3P4-202ENST00000540428 S100A2P29034 98 aa6.2□□□□□ -1.42
CBX3P4-202ENST00000540428 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
CBX3P4-202ENST00000540428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.19□□□□□ -1.42
CBX3P4-202ENST00000540428 PCP4L1A6NKN8 68 aa6.18□□□□□ -1.42
CBX3P4-202ENST00000540428 LST1O00453 97 aa6.18□□□□□ -1.42
CBX3P4-202ENST00000540428 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
CBX3P4-202ENST00000540428 PYY3Q5JQD4 70 aa6.17□□□□□ -1.42
CBX3P4-202ENST00000540428 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
CBX3P4-202ENST00000540428 Q96NJ1 140 aa6.16□□□□□ -1.42
CBX3P4-202ENST00000540428 HIST1H2BLQ99880 126 aa6.16□□□□□ -1.42
CBX3P4-202ENST00000540428 SNHG12Q9BXW3 62 aa6.16□□□□□ -1.42
CBX3P4-202ENST00000540428 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
CBX3P4-202ENST00000540428 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
CBX3P4-202ENST00000540428 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
CBX3P4-202ENST00000540428 BVES-AS1Q5T3Y7 98 aa6.15□□□□□ -1.42
CBX3P4-202ENST00000540428 TRBV20-1A0A075B6N2 111 aa6.14□□□□□ -1.43
CBX3P4-202ENST00000540428 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
CBX3P4-202ENST00000540428 A8MUU9 505 aa6.14□□□□□ -1.43
CBX3P4-202ENST00000540428 H3BUT2 72 aa6.12□□□□□ -1.43
CBX3P4-202ENST00000540428 HSBP1L1C9JCN9 74 aa6.11□□□□□ -1.43
CBX3P4-202ENST00000540428 USH2AO75445 5202 aa6.1□□□□□ -1.43
CBX3P4-202ENST00000540428 TEN1Q86WV5 123 aa6.1□□□□□ -1.43
CBX3P4-202ENST00000540428 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
CBX3P4-202ENST00000540428 SNCGO76070 127 aa6.07□□□□□ -1.44
CBX3P4-202ENST00000540428 A0A087WSZ3 146 aa6.06□□□□□ -1.44
CBX3P4-202ENST00000540428 TSTD3H0UI37 97 aa6.06□□□□□ -1.44
CBX3P4-202ENST00000540428 NDUFV3P56181 108 aaKnown RBP6.06□□□□□ -1.44
CBX3P4-202ENST00000540428 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
CBX3P4-202ENST00000540428 H0YGX0 51 aa6.05□□□□□ -1.44
CBX3P4-202ENST00000540428 MT2AP02795 61 aa6.04□□□□□ -1.44
CBX3P4-202ENST00000540428 GHRHP01286 108 aa6.03□□□□□ -1.44
CBX3P4-202ENST00000540428 DSCR10P59022 87 aa6.03□□□□□ -1.44
CBX3P4-202ENST00000540428 FAM236DA0A1B0GTK5 79 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 A0A1B0GX51 115 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 H3BMG7 143 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 FAM236CP0DP71 79 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 COX8AP10176 69 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 RAB37Q96AX2 223 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 C14orf144Q96I85 54 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
CBX3P4-202ENST00000540428 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
CBX3P4-202ENST00000540428 DLEU1O43261 78 aa6□□□□□ -1.45
CBX3P4-202ENST00000540428 LINC00313P59037 77 aa6□□□□□ -1.45
CBX3P4-202ENST00000540428 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
CBX3P4-202ENST00000540428 SIGMAR1Q99720 223 aa6□□□□□ -1.45
CBX3P4-202ENST00000540428 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
CBX3P4-202ENST00000540428 RBM12B-AS1Q9P1G2 102 aa5.99□□□□□ -1.45
CBX3P4-202ENST00000540428 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
CBX3P4-202ENST00000540428 A0A1W2PNM2 257 aa5.98□□□□□ -1.45
CBX3P4-202ENST00000540428 LCE2BO14633 110 aa5.98□□□□□ -1.45
CBX3P4-202ENST00000540428 MT1FP04733 61 aa5.98□□□□□ -1.45
CBX3P4-202ENST00000540428 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
CBX3P4-202ENST00000540428 FABP2P12104 132 aa5.97□□□□□ -1.45
CBX3P4-202ENST00000540428 HRES1P13985 223 aa5.97□□□□□ -1.45
CBX3P4-202ENST00000540428 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
CBX3P4-202ENST00000540428 VAMP8Q9BV40 100 aa5.97□□□□□ -1.45
CBX3P4-202ENST00000540428 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
CBX3P4-202ENST00000540428 HIGD1BQ9P298 99 aa5.96□□□□□ -1.46
CBX3P4-202ENST00000540428 TRBV7-4A0A0J9YYF1 115 aa5.95□□□□□ -1.46
CBX3P4-202ENST00000540428 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
CBX3P4-202ENST00000540428 PAM16Q9Y3D7 125 aa5.94□□□□□ -1.46
CBX3P4-202ENST00000540428 SPATA45Q537H7 98 aa5.93□□□□□ -1.46
CBX3P4-202ENST00000540428 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
CBX3P4-202ENST00000540428 ANKRD29Q8N6D5 301 aa5.93□□□□□ -1.46
CBX3P4-202ENST00000540428 H3BQ85 93 aa5.92□□□□□ -1.46
CBX3P4-202ENST00000540428 PRO1854Q9UHT4 67 aa5.92□□□□□ -1.46
CBX3P4-202ENST00000540428 M0R143 59 aa5.91□□□□□ -1.46
CBX3P4-202ENST00000540428 MTURNQ8N3F0 131 aa5.91□□□□□ -1.46
CBX3P4-202ENST00000540428 LINC00472Q9H8W2 130 aa5.91□□□□□ -1.46
CBX3P4-202ENST00000540428 UQCR10Q9UDW1 63 aa5.91□□□□□ -1.46
CBX3P4-202ENST00000540428 A0A1B0GV90 55 aa5.9□□□□□ -1.46
CBX3P4-202ENST00000540428 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
CBX3P4-202ENST00000540428 A6NJY4 79 aa5.9□□□□□ -1.46
CBX3P4-202ENST00000540428 CEND1Q8N111 149 aa5.9□□□□□ -1.46
CBX3P4-202ENST00000540428 DNAL4O96015 105 aa5.89□□□□□ -1.47
CBX3P4-202ENST00000540428 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
CBX3P4-202ENST00000540428 LINC00846Q9NV44 126 aa5.89□□□□□ -1.47
CBX3P4-202ENST00000540428 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms