RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 Q6ZSA8 131 aa10.55□□□□□ -0.72
LTBR-207ENST00000539925 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
LTBR-207ENST00000539925 IGKV3D-7A0A0C4DH55 119 aa10.53□□□□□ -0.72
LTBR-207ENST00000539925 ZNF861PO60384 105 aa10.53□□□□□ -0.72
LTBR-207ENST00000539925 NREPQ16612 68 aa10.52□□□□□ -0.73
LTBR-207ENST00000539925 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
LTBR-207ENST00000539925 CRYGAP11844 174 aa10.5□□□□□ -0.73
LTBR-207ENST00000539925 HAMPP81172 84 aa10.5□□□□□ -0.73
LTBR-207ENST00000539925 RPL37AP61513 92 aaKnown RBP10.5□□□□□ -0.73
LTBR-207ENST00000539925 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
LTBR-207ENST00000539925 CIRBP-AS1Q8TBR5 109 aa10.49□□□□□ -0.73
LTBR-207ENST00000539925 IGFL1Q6UW32 110 aa10.48□□□□□ -0.73
LTBR-207ENST00000539925 ANAPC13Q9BS18 74 aa10.48□□□□□ -0.73
LTBR-207ENST00000539925 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
LTBR-207ENST00000539925 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
LTBR-207ENST00000539925 HECTD4Q9Y4D8 3996 aa10.47□□□□□ -0.73
LTBR-207ENST00000539925 IGLV7-43P04211 117 aa10.47□□□□□ -0.73
LTBR-207ENST00000539925 KRTAP10-1P60331 282 aa10.47□□□□□ -0.73
LTBR-207ENST00000539925 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.74
LTBR-207ENST00000539925 FAM30AQ9NZY2 134 aa10.46□□□□□ -0.74
LTBR-207ENST00000539925 SCXQ7RTU7 201 aa10.45□□□□□ -0.74
LTBR-207ENST00000539925 ATOX1O00244 68 aa10.43□□□□□ -0.74
LTBR-207ENST00000539925 BPY2O14599 106 aa10.42□□□□□ -0.74
LTBR-207ENST00000539925 FRAS1Q86XX4 4008 aa10.37□□□□□ -0.75
LTBR-207ENST00000539925 A0A087WVE0 104 aa10.36□□□□□ -0.75
LTBR-207ENST00000539925 C9orf153Q5TBE3 101 aa10.36□□□□□ -0.75
LTBR-207ENST00000539925 A0A087WSZ3 146 aa10.34□□□□□ -0.75
LTBR-207ENST00000539925 DNAH11Q96DT5 4516 aa10.34□□□□□ -0.75
LTBR-207ENST00000539925 IGLV9-49A0A0B4J1Y8 123 aa10.33□□□□□ -0.76
LTBR-207ENST00000539925 SMIM20Q8N5G0 67 aa10.32□□□□□ -0.76
LTBR-207ENST00000539925 DNAH8Q96JB1 4490 aa10.31□□□□□ -0.76
LTBR-207ENST00000539925 FAT2Q9NYQ8 4349 aa10.31□□□□□ -0.76
LTBR-207ENST00000539925 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
LTBR-207ENST00000539925 A0A1B0GVY2 172 aa10.3□□□□□ -0.76
LTBR-207ENST00000539925 SS18L2Q9UHA2 77 aa10.3□□□□□ -0.76
LTBR-207ENST00000539925 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 IGKV4-1P06312 121 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 MOBPQ13875 183 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 SACSQ9NZJ4 4579 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 HYDINQ4G0P3 5121 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 SSBP3-AS1Q7Z2R9 100 aa10.28□□□□□ -0.76
LTBR-207ENST00000539925 J3KT08 172 aa10.27□□□□□ -0.77
LTBR-207ENST00000539925 UQCRQO14949 82 aa10.27□□□□□ -0.77
LTBR-207ENST00000539925 SERP2Q8N6R1 65 aa10.27□□□□□ -0.77
LTBR-207ENST00000539925 COX7CP15954 63 aa10.25□□□□□ -0.77
LTBR-207ENST00000539925 CD164Q04900 197 aa10.25□□□□□ -0.77
LTBR-207ENST00000539925 PKD1P98161 4303 aa10.23□□□□□ -0.77
LTBR-207ENST00000539925 DSCR10P59022 87 aa10.23□□□□□ -0.77
LTBR-207ENST00000539925 LINC00472Q9H8W2 130 aa10.22□□□□□ -0.77
LTBR-207ENST00000539925 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.78
LTBR-207ENST00000539925 TRAV7A0A075B6U4 112 aa10.2□□□□□ -0.78
LTBR-207ENST00000539925 Q8N9L7 120 aa10.2□□□□□ -0.78
LTBR-207ENST00000539925 SRRM2Q9UQ35 2752 aaKnown RBP10.19□□□□□ -0.78
LTBR-207ENST00000539925 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
LTBR-207ENST00000539925 CCDC179H3BU77 68 aa10.17□□□□□ -0.78
LTBR-207ENST00000539925 A8MWP4 228 aa10.16□□□□□ -0.78
LTBR-207ENST00000539925 K7EQZ3 153 aa10.16□□□□□ -0.78
LTBR-207ENST00000539925 NDUFB1O75438 58 aa10.15□□□□□ -0.78
LTBR-207ENST00000539925 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
LTBR-207ENST00000539925 PRR15Q8IV56 129 aa10.13□□□□□ -0.79
LTBR-207ENST00000539925 HRCT1Q6UXD1 115 aa10.12□□□□□ -0.79
LTBR-207ENST00000539925 KRTAP1-4P0C5Y4 121 aa10.11□□□□□ -0.79
LTBR-207ENST00000539925 DEFB116Q30KQ4 102 aa10.11□□□□□ -0.79
LTBR-207ENST00000539925 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
LTBR-207ENST00000539925 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
LTBR-207ENST00000539925 Q5XG85 94 aa10.09□□□□□ -0.79
LTBR-207ENST00000539925 Q96NJ1 140 aa10.09□□□□□ -0.79
LTBR-207ENST00000539925 A0A087X002 238 aa10.08□□□□□ -0.8
LTBR-207ENST00000539925 LRP1BQ9NZR2 4599 aa10.07□□□□□ -0.8
LTBR-207ENST00000539925 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
LTBR-207ENST00000539925 KRTAP13-2Q52LG2 175 aa10.06□□□□□ -0.8
LTBR-207ENST00000539925 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
LTBR-207ENST00000539925 RYR2Q92736 4967 aa10.05□□□□□ -0.8
LTBR-207ENST00000539925 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
LTBR-207ENST00000539925 C4orf48Q5BLP8 95 aa10.02□□□□□ -0.81
LTBR-207ENST00000539925 CASC2Q6XLA1 102 aa10.02□□□□□ -0.81
LTBR-207ENST00000539925 TYMSOSQ8TAI1 123 aa10.02□□□□□ -0.81
LTBR-207ENST00000539925 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
LTBR-207ENST00000539925 SMR3BP02814 79 aaPredicted RBP10.01□□□□□ -0.81
LTBR-207ENST00000539925 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
LTBR-207ENST00000539925 A0A1B0GVX0 72 aa9.99□□□□□ -0.81
LTBR-207ENST00000539925 C20orf197Q8N268 126 aa9.99□□□□□ -0.81
LTBR-207ENST00000539925 KLKP1Q107X0 134 aa9.99□□□□□ -0.81
LTBR-207ENST00000539925 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
LTBR-207ENST00000539925 PKHD1P08F94 4074 aa9.98□□□□□ -0.81
LTBR-207ENST00000539925 SPINK1P00995 79 aa9.98□□□□□ -0.81
LTBR-207ENST00000539925 WFDC13Q8IUB5 93 aa9.98□□□□□ -0.81
LTBR-207ENST00000539925 RPS29P62273 56 aaKnown RBP9.97□□□□□ -0.81
LTBR-207ENST00000539925 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.81
LTBR-207ENST00000539925 FAM229AH3BQW9 127 aa9.96□□□□□ -0.81
LTBR-207ENST00000539925 NDUFC1O43677 76 aa9.96□□□□□ -0.81
LTBR-207ENST00000539925 hDV103S1A0JD37 113 aa9.96□□□□□ -0.82
LTBR-207ENST00000539925 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
LTBR-207ENST00000539925 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
LTBR-207ENST00000539925 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
LTBR-207ENST00000539925 TMEM254Q8TBM7 123 aa9.95□□□□□ -0.82
LTBR-207ENST00000539925 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
LTBR-207ENST00000539925 C8orf87E5RJ46 101 aa9.93□□□□□ -0.82
LTBR-207ENST00000539925 KMT2CQ8NEZ4 4911 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms