RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
CCDC42-202ENST00000539522 Q6ZQY7 126 aa7.79□□□□□ -1.16
CCDC42-202ENST00000539522 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
CCDC42-202ENST00000539522 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
CCDC42-202ENST00000539522 PPDPFLQ8WWR9 84 aa7.76□□□□□ -1.17
CCDC42-202ENST00000539522 HIGD2AQ9BW72 106 aa7.76□□□□□ -1.17
CCDC42-202ENST00000539522 ETDBQ3ZM63 59 aa7.75□□□□□ -1.17
CCDC42-202ENST00000539522 TEN1Q86WV5 123 aa7.75□□□□□ -1.17
CCDC42-202ENST00000539522 KRTAP10-8P60410 259 aa7.74□□□□□ -1.17
CCDC42-202ENST00000539522 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
CCDC42-202ENST00000539522 OXTP01178 125 aa7.73□□□□□ -1.17
CCDC42-202ENST00000539522 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
CCDC42-202ENST00000539522 IGLV5-48A0A075B6I7 105 aa7.72□□□□□ -1.17
CCDC42-202ENST00000539522 A0A087X002 238 aa7.72□□□□□ -1.17
CCDC42-202ENST00000539522 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
CCDC42-202ENST00000539522 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
CCDC42-202ENST00000539522 Q8N377 158 aa7.71□□□□□ -1.18
CCDC42-202ENST00000539522 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
CCDC42-202ENST00000539522 ST20-AS1Q8NBB2 130 aa7.71□□□□□ -1.18
CCDC42-202ENST00000539522 NDUFV3P56181 108 aaKnown RBP7.7□□□□□ -1.18
CCDC42-202ENST00000539522 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
CCDC42-202ENST00000539522 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
CCDC42-202ENST00000539522 LAMTOR3Q9UHA4 124 aa7.7□□□□□ -1.18
CCDC42-202ENST00000539522 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
CCDC42-202ENST00000539522 SPRR4Q96PI1 79 aa7.69□□□□□ -1.18
CCDC42-202ENST00000539522 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
CCDC42-202ENST00000539522 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
CCDC42-202ENST00000539522 SPRR1BP22528 89 aa7.67□□□□□ -1.18
CCDC42-202ENST00000539522 RBM3P98179 157 aaKnown RBP7.67□□□□□ -1.18
CCDC42-202ENST00000539522 J3QR89 54 aa7.66□□□□□ -1.18
CCDC42-202ENST00000539522 GAGE2AQ6NT46 116 aa7.66□□□□□ -1.18
CCDC42-202ENST00000539522 LINC00483Q53H64 154 aa7.65□□□□□ -1.18
CCDC42-202ENST00000539522 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
CCDC42-202ENST00000539522 PDE6GP18545 87 aa7.64□□□□□ -1.19
CCDC42-202ENST00000539522 FAM229BQ4G0N7 80 aa7.64□□□□□ -1.19
CCDC42-202ENST00000539522 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
CCDC42-202ENST00000539522 K7ERU9 68 aa7.63□□□□□ -1.19
CCDC42-202ENST00000539522 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
CCDC42-202ENST00000539522 DSCR8Q96T75 97 aa7.63□□□□□ -1.19
CCDC42-202ENST00000539522 F8WEM9 126 aa7.62□□□□□ -1.19
CCDC42-202ENST00000539522 J3QL48 77 aa7.62□□□□□ -1.19
CCDC42-202ENST00000539522 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
CCDC42-202ENST00000539522 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
CCDC42-202ENST00000539522 C14orf132Q9NPU4 83 aa7.61□□□□□ -1.19
CCDC42-202ENST00000539522 CRYGAP11844 174 aa7.6□□□□□ -1.19
CCDC42-202ENST00000539522 A0A1B0GV72 72 aa7.59□□□□□ -1.19
CCDC42-202ENST00000539522 CCKP06307 115 aa7.59□□□□□ -1.19
CCDC42-202ENST00000539522 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
CCDC42-202ENST00000539522 TRBV7-4A0A0J9YYF1 115 aa7.58□□□□□ -1.2
CCDC42-202ENST00000539522 ACYP1P07311 99 aa7.57□□□□□ -1.2
CCDC42-202ENST00000539522 Q6ZQT0 140 aa7.57□□□□□ -1.2
CCDC42-202ENST00000539522 Q6JHZ5 121 aa7.56□□□□□ -1.2
CCDC42-202ENST00000539522 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
CCDC42-202ENST00000539522 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
CCDC42-202ENST00000539522 FAM240AA0A1B0GVK7 77 aa7.54□□□□□ -1.2
CCDC42-202ENST00000539522 A0A1B0GW54 56 aa7.52□□□□□ -1.21
CCDC42-202ENST00000539522 MOBPQ13875 183 aa7.52□□□□□ -1.21
CCDC42-202ENST00000539522 C9orf153Q5TBE3 101 aa7.52□□□□□ -1.21
CCDC42-202ENST00000539522 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
CCDC42-202ENST00000539522 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
CCDC42-202ENST00000539522 Q8NBF4 154 aa7.51□□□□□ -1.21
CCDC42-202ENST00000539522 VPS25Q9BRG1 176 aa7.5□□□□□ -1.21
CCDC42-202ENST00000539522 LPAP08519 4548 aa7.49□□□□□ -1.21
CCDC42-202ENST00000539522 A0A1W2PNM2 257 aa7.49□□□□□ -1.21
CCDC42-202ENST00000539522 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
CCDC42-202ENST00000539522 Q6Q795 121 aa7.47□□□□□ -1.21
CCDC42-202ENST00000539522 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
CCDC42-202ENST00000539522 LINC00846Q9NV44 126 aa7.45□□□□□ -1.22
CCDC42-202ENST00000539522 CDIP1Q9H305 208 aa7.44□□□□□ -1.22
CCDC42-202ENST00000539522 CD164Q04900 197 aa7.43□□□□□ -1.22
CCDC42-202ENST00000539522 SPAG11AQ6PDA7 123 aa7.43□□□□□ -1.22
CCDC42-202ENST00000539522 UBL5Q9BZL1 73 aa7.43□□□□□ -1.22
CCDC42-202ENST00000539522 LRP2P98164 4655 aa7.42□□□□□ -1.22
CCDC42-202ENST00000539522 NREPQ16612 68 aa7.41□□□□□ -1.22
CCDC42-202ENST00000539522 C4orf48Q5BLP8 95 aa7.41□□□□□ -1.22
CCDC42-202ENST00000539522 LINC00643Q86TS7 51 aa7.41□□□□□ -1.22
CCDC42-202ENST00000539522 TRBV7-7A0A0K0K1E9 115 aa7.4□□□□□ -1.22
CCDC42-202ENST00000539522 SPINK1P00995 79 aa7.39□□□□□ -1.23
CCDC42-202ENST00000539522 RETNLBQ9BQ08 111 aa7.39□□□□□ -1.23
CCDC42-202ENST00000539522 RPS29P62273 56 aaKnown RBP7.38□□□□□ -1.23
CCDC42-202ENST00000539522 Q6ZVQ6 151 aa7.38□□□□□ -1.23
CCDC42-202ENST00000539522 A0A087WSZ3 146 aa7.37□□□□□ -1.23
CCDC42-202ENST00000539522 HRCT1Q6UXD1 115 aa7.37□□□□□ -1.23
CCDC42-202ENST00000539522 SIGMAR1Q99720 223 aa7.36□□□□□ -1.23
CCDC42-202ENST00000539522 UBR4Q5T4S7 5183 aa7.36□□□□□ -1.23
CCDC42-202ENST00000539522 SS18L2Q9UHA2 77 aa7.35□□□□□ -1.23
CCDC42-202ENST00000539522 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
CCDC42-202ENST00000539522 LIMD2Q9BT23 127 aa7.33□□□□□ -1.24
CCDC42-202ENST00000539522 Q5XG85 94 aa7.32□□□□□ -1.24
CCDC42-202ENST00000539522 BPY2O14599 106 aa7.31□□□□□ -1.24
CCDC42-202ENST00000539522 CXCL6P80162 114 aa7.31□□□□□ -1.24
CCDC42-202ENST00000539522 IGKV3D-7A0A0C4DH55 119 aa7.3□□□□□ -1.24
CCDC42-202ENST00000539522 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
CCDC42-202ENST00000539522 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
CCDC42-202ENST00000539522 LINC00472Q9H8W2 130 aa7.3□□□□□ -1.24
CCDC42-202ENST00000539522 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
CCDC42-202ENST00000539522 J3KT08 172 aa7.28□□□□□ -1.24
CCDC42-202ENST00000539522 PRR4Q16378 134 aa7.28□□□□□ -1.24
CCDC42-202ENST00000539522 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
CCDC42-202ENST00000539522 DEFB116Q30KQ4 102 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms