RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 HERC2O95714 4834 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 A0A087X002 238 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 F8WEM9 126 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 SPRR1BP22528 89 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 LINC01547P58512 204 aaPredicted RBP5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 SPCS1Q9Y6A9 102 aa5.11□□□□□ -1.59
LPCAT3-208ENST00000538987 H3BQ85 93 aa5.1□□□□□ -1.59
LPCAT3-208ENST00000538987 TMEM256-PLSCR3K7ERE1 68 aa5.1□□□□□ -1.59
LPCAT3-208ENST00000538987 BAALC-AS2P0C853 105 aa5.1□□□□□ -1.59
LPCAT3-208ENST00000538987 MOBPQ13875 183 aa5.1□□□□□ -1.59
LPCAT3-208ENST00000538987 PPDPFLQ8WWR9 84 aa5.1□□□□□ -1.59
LPCAT3-208ENST00000538987 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.59
LPCAT3-208ENST00000538987 C9JAW5 83 aa5.09□□□□□ -1.59
LPCAT3-208ENST00000538987 H3BMG7 143 aa5.09□□□□□ -1.59
LPCAT3-208ENST00000538987 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
LPCAT3-208ENST00000538987 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
LPCAT3-208ENST00000538987 C4orf48Q5BLP8 95 aa5.08□□□□□ -1.6
LPCAT3-208ENST00000538987 A0A1B0GV72 72 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 KRTAP10-8P60410 259 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 GTF2H5Q6ZYL4 71 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 SMIM29Q86T20 159 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 Q8NBF4 154 aa5.07□□□□□ -1.6
LPCAT3-208ENST00000538987 K7EP34 96 aa5.06□□□□□ -1.6
LPCAT3-208ENST00000538987 ANKRD29Q8N6D5 301 aa5.06□□□□□ -1.6
LPCAT3-208ENST00000538987 UBE2V1Q13404 147 aa5.05□□□□□ -1.6
LPCAT3-208ENST00000538987 MTURNQ8N3F0 131 aa5.05□□□□□ -1.6
LPCAT3-208ENST00000538987 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
LPCAT3-208ENST00000538987 HRCT1Q6UXD1 115 aa5.04□□□□□ -1.6
LPCAT3-208ENST00000538987 LINC00304Q8N9R0 145 aa5.04□□□□□ -1.6
LPCAT3-208ENST00000538987 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
LPCAT3-208ENST00000538987 Q6JHZ5 121 aa5.03□□□□□ -1.6
LPCAT3-208ENST00000538987 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 H3BT86 120 aa5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 LCE2BO14633 110 aa5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 SPAG11AQ6PDA7 123 aa5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 DSCR8Q96T75 97 aa5.02□□□□□ -1.61
LPCAT3-208ENST00000538987 A0A1B0GV90 55 aa5.01□□□□□ -1.61
LPCAT3-208ENST00000538987 JMJD7-PLA2G4BH0Y9G9 81 aa5.01□□□□□ -1.61
LPCAT3-208ENST00000538987 IGFL1Q6UW32 110 aa5.01□□□□□ -1.61
LPCAT3-208ENST00000538987 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
LPCAT3-208ENST00000538987 PKHD1L1Q86WI1 4243 aa5□□□□□ -1.61
LPCAT3-208ENST00000538987 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
LPCAT3-208ENST00000538987 SPINK1P00995 79 aa5□□□□□ -1.61
LPCAT3-208ENST00000538987 F8W1H4 67 aa4.99□□□□□ -1.61
LPCAT3-208ENST00000538987 VPS25Q9BRG1 176 aa4.99□□□□□ -1.61
LPCAT3-208ENST00000538987 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
LPCAT3-208ENST00000538987 CD164Q04900 197 aa4.98□□□□□ -1.61
LPCAT3-208ENST00000538987 CCKP06307 115 aa4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 SMCPP49901 116 aaPredicted RBP4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 TEN1Q86WV5 123 aa4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 LIMD2Q9BT23 127 aa4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
LPCAT3-208ENST00000538987 PRO0461Q9UI25 63 aa4.96□□□□□ -1.62
LPCAT3-208ENST00000538987 TRBV7-4A0A0J9YYF1 115 aa4.95□□□□□ -1.62
LPCAT3-208ENST00000538987 PDE6GP18545 87 aa4.95□□□□□ -1.62
LPCAT3-208ENST00000538987 FAT3Q8TDW7 4589 aa4.95□□□□□ -1.62
LPCAT3-208ENST00000538987 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
LPCAT3-208ENST00000538987 A0A1W2PNM2 257 aa4.94□□□□□ -1.62
LPCAT3-208ENST00000538987 OBSCN-AS1Q96MR7 158 aa4.94□□□□□ -1.62
LPCAT3-208ENST00000538987 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
LPCAT3-208ENST00000538987 A0A087WSZ3 146 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 LOC110117498A0A087WWA1 95 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 ETDBQ3ZM63 59 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 Q6Q795 121 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 Q6ZQT0 140 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
LPCAT3-208ENST00000538987 PRR4Q16378 134 aa4.92□□□□□ -1.62
LPCAT3-208ENST00000538987 SS18L2Q9UHA2 77 aa4.92□□□□□ -1.62
LPCAT3-208ENST00000538987 C21orf62-AS1Q17RA5 79 aa4.91□□□□□ -1.62
LPCAT3-208ENST00000538987 DMBT1Q9UGM3 2413 aaPredicted RBP4.89□□□□□ -1.63
LPCAT3-208ENST00000538987 Q5XG85 94 aa4.89□□□□□ -1.63
LPCAT3-208ENST00000538987 TNXBP22105 4242 aa4.88□□□□□ -1.63
LPCAT3-208ENST00000538987 A0A1B0GW54 56 aa4.88□□□□□ -1.63
LPCAT3-208ENST00000538987 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
LPCAT3-208ENST00000538987 IGLV7-46A0A075B6I9 117 aa4.86□□□□□ -1.63
LPCAT3-208ENST00000538987 NREPQ16612 68 aa4.86□□□□□ -1.63
LPCAT3-208ENST00000538987 ASB16-AS1Q495Z4 193 aa4.86□□□□□ -1.63
LPCAT3-208ENST00000538987 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
LPCAT3-208ENST00000538987 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
LPCAT3-208ENST00000538987 IGKV4-1P06312 121 aa4.84□□□□□ -1.63
LPCAT3-208ENST00000538987 SIGMAR1Q99720 223 aa4.83□□□□□ -1.64
LPCAT3-208ENST00000538987 UBL5Q9BZL1 73 aa4.82□□□□□ -1.64
LPCAT3-208ENST00000538987 J3KT08 172 aa4.81□□□□□ -1.64
LPCAT3-208ENST00000538987 J3QR89 54 aa4.81□□□□□ -1.64
LPCAT3-208ENST00000538987 Q96NJ1 140 aa4.81□□□□□ -1.64
LPCAT3-208ENST00000538987 LINC00472Q9H8W2 130 aa4.81□□□□□ -1.64
LPCAT3-208ENST00000538987 LINC00846Q9NV44 126 aa4.81□□□□□ -1.64
LPCAT3-208ENST00000538987 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
LPCAT3-208ENST00000538987 ACYP1P07311 99 aa4.8□□□□□ -1.64
LPCAT3-208ENST00000538987 Q6ZVQ6 151 aa4.8□□□□□ -1.64
LPCAT3-208ENST00000538987 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
LPCAT3-208ENST00000538987 BPY2O14599 106 aa4.79□□□□□ -1.64
LPCAT3-208ENST00000538987 NDUFB1O75438 58 aa4.79□□□□□ -1.64
LPCAT3-208ENST00000538987 IGHV6-1A0A0B4J1U7 121 aa4.77□□□□□ -1.65
LPCAT3-208ENST00000538987 TPRXLQ17RH7 258 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms