RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
CDCA3-207ENST00000538862 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDCA3-207ENST00000538862 TNP2Q05952 138 aa9.31□□□□□ -0.92
CDCA3-207ENST00000538862 BPY2O14599 106 aa9.3□□□□□ -0.92
CDCA3-207ENST00000538862 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
CDCA3-207ENST00000538862 NDUFC1O43677 76 aa9.28□□□□□ -0.92
CDCA3-207ENST00000538862 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
CDCA3-207ENST00000538862 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
CDCA3-207ENST00000538862 EPPK1P58107 5090 aaKnown RBP9.27□□□□□ -0.93
CDCA3-207ENST00000538862 A0A1W2PNM2 257 aa9.27□□□□□ -0.93
CDCA3-207ENST00000538862 Q8N9L7 120 aa9.26□□□□□ -0.93
CDCA3-207ENST00000538862 ST20-AS1Q8NBB2 130 aa9.26□□□□□ -0.93
CDCA3-207ENST00000538862 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
CDCA3-207ENST00000538862 Q8NBF4 154 aa9.25□□□□□ -0.93
CDCA3-207ENST00000538862 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
CDCA3-207ENST00000538862 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
CDCA3-207ENST00000538862 SPRR4Q96PI1 79 aa9.25□□□□□ -0.93
CDCA3-207ENST00000538862 UBE2BP63146 152 aa9.24□□□□□ -0.93
CDCA3-207ENST00000538862 FRAS1Q86XX4 4008 aa9.24□□□□□ -0.93
CDCA3-207ENST00000538862 DNAH6Q9C0G6 4158 aa9.24□□□□□ -0.93
CDCA3-207ENST00000538862 OCR1Q9BZK8 76 aa9.23□□□□□ -0.93
CDCA3-207ENST00000538862 F8WEM9 126 aa9.21□□□□□ -0.93
CDCA3-207ENST00000538862 TMEM254Q8TBM7 123 aa9.21□□□□□ -0.94
CDCA3-207ENST00000538862 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
CDCA3-207ENST00000538862 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
CDCA3-207ENST00000538862 SMIM29Q86T20 159 aa9.19□□□□□ -0.94
CDCA3-207ENST00000538862 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
CDCA3-207ENST00000538862 LINC00474Q9P2X8 69 aa9.17□□□□□ -0.94
CDCA3-207ENST00000538862 A0A096LNI7 61 aa9.17□□□□□ -0.94
CDCA3-207ENST00000538862 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
CDCA3-207ENST00000538862 KRTAP1-5Q9BYS1 174 aa9.16□□□□□ -0.94
CDCA3-207ENST00000538862 PSCAO43653 123 aa9.15□□□□□ -0.95
CDCA3-207ENST00000538862 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
CDCA3-207ENST00000538862 DSCR10P59022 87 aa9.14□□□□□ -0.95
CDCA3-207ENST00000538862 DNAH2Q9P225 4427 aa9.14□□□□□ -0.95
CDCA3-207ENST00000538862 IGLV8-61A0A075B6I0 122 aa9.13□□□□□ -0.95
CDCA3-207ENST00000538862 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
CDCA3-207ENST00000538862 IGKV2-24A0A0C4DH68 120 aa9.13□□□□□ -0.95
CDCA3-207ENST00000538862 IGFL1Q6UW32 110 aa9.11□□□□□ -0.95
CDCA3-207ENST00000538862 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
CDCA3-207ENST00000538862 PRLHP81277 87 aa9.11□□□□□ -0.95
CDCA3-207ENST00000538862 H0Y9J4 135 aa9.08□□□□□ -0.96
CDCA3-207ENST00000538862 K7EQZ3 153 aa9.08□□□□□ -0.96
CDCA3-207ENST00000538862 FAT2Q9NYQ8 4349 aa9.08□□□□□ -0.96
CDCA3-207ENST00000538862 HIGD2AQ9BW72 106 aa9.07□□□□□ -0.96
CDCA3-207ENST00000538862 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
CDCA3-207ENST00000538862 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
CDCA3-207ENST00000538862 DNAH17Q9UFH2 4485 aa9.06□□□□□ -0.96
CDCA3-207ENST00000538862 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-207ENST00000538862 SPRR1BP22528 89 aa9.05□□□□□ -0.96
CDCA3-207ENST00000538862 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
CDCA3-207ENST00000538862 UBE2AP49459 152 aa9.05□□□□□ -0.96
CDCA3-207ENST00000538862 Q6ZR54 194 aa9.05□□□□□ -0.96
CDCA3-207ENST00000538862 PHF5AQ7RTV0 110 aaKnown RBP9.04□□□□□ -0.96
CDCA3-207ENST00000538862 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
CDCA3-207ENST00000538862 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
CDCA3-207ENST00000538862 A0A0G2JQZ4 141 aa9.03□□□□□ -0.96
CDCA3-207ENST00000538862 KTN1-AS1Q86SY8 53 aa9.03□□□□□ -0.96
CDCA3-207ENST00000538862 RTL8CO15255 209 aa9.03□□□□□ -0.96
CDCA3-207ENST00000538862 A0A087WSZ3 146 aa9.02□□□□□ -0.97
CDCA3-207ENST00000538862 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
CDCA3-207ENST00000538862 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
CDCA3-207ENST00000538862 RBM12B-AS1Q9P1G2 102 aa9.02□□□□□ -0.97
CDCA3-207ENST00000538862 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
CDCA3-207ENST00000538862 NBDYA0A0U1RRE5 68 aa9.01□□□□□ -0.97
CDCA3-207ENST00000538862 Q1T7F1 81 aa9.01□□□□□ -0.97
CDCA3-207ENST00000538862 PKHD1P08F94 4074 aa9□□□□□ -0.97
CDCA3-207ENST00000538862 FAM229BQ4G0N7 80 aa8.99□□□□□ -0.97
CDCA3-207ENST00000538862 ZCCHC13Q8WW36 166 aaKnown RBP8.99□□□□□ -0.97
CDCA3-207ENST00000538862 C1orf134Q5TEV5 83 aa8.99□□□□□ -0.97
CDCA3-207ENST00000538862 PKD1P98161 4303 aa8.99□□□□□ -0.97
CDCA3-207ENST00000538862 NDUFS5O43920 106 aa8.96□□□□□ -0.97
CDCA3-207ENST00000538862 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.97
CDCA3-207ENST00000538862 A0A1B0GVY2 172 aa8.95□□□□□ -0.98
CDCA3-207ENST00000538862 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
CDCA3-207ENST00000538862 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
CDCA3-207ENST00000538862 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
CDCA3-207ENST00000538862 LINC00472Q9H8W2 130 aa8.93□□□□□ -0.98
CDCA3-207ENST00000538862 DNAH11Q96DT5 4516 aa8.93□□□□□ -0.98
CDCA3-207ENST00000538862 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
CDCA3-207ENST00000538862 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
CDCA3-207ENST00000538862 KIAA1109Q2LD37 5005 aa8.9□□□□□ -0.98
CDCA3-207ENST00000538862 A8MWP4 228 aa8.9□□□□□ -0.98
CDCA3-207ENST00000538862 DYNC1H1Q14204 4646 aaKnown RBP8.89□□□□□ -0.99
CDCA3-207ENST00000538862 PANO1I0J062 215 aa8.89□□□□□ -0.99
CDCA3-207ENST00000538862 NDUFB1O75438 58 aa8.89□□□□□ -0.99
CDCA3-207ENST00000538862 MP68P56378 58 aa8.89□□□□□ -0.99
CDCA3-207ENST00000538862 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
CDCA3-207ENST00000538862 CASC2Q6XLA1 102 aa8.88□□□□□ -0.99
CDCA3-207ENST00000538862 SPACA4Q8TDM5 124 aa8.88□□□□□ -0.99
CDCA3-207ENST00000538862 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
CDCA3-207ENST00000538862 H3BPC8 53 aa8.86□□□□□ -0.99
CDCA3-207ENST00000538862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -1
CDCA3-207ENST00000538862 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
CDCA3-207ENST00000538862 H3BS24 57 aa8.83□□□□□ -1
CDCA3-207ENST00000538862 C1orf64Q8NEQ6 169 aa8.83□□□□□ -1
CDCA3-207ENST00000538862 HERC2O95714 4834 aa8.82□□□□□ -1
CDCA3-207ENST00000538862 A0A087WTM6 91 aa8.82□□□□□ -1
CDCA3-207ENST00000538862 LINC00483Q53H64 154 aa8.82□□□□□ -1
CDCA3-207ENST00000538862 LINC00208Q96KT6 92 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms