RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SPCS1Q9Y6A9 102 aa13.91□□□□□ -0.18
TMEM260-202ENST00000538838 KRTAP13-2Q52LG2 175 aa13.9□□□□□ -0.18
TMEM260-202ENST00000538838 PCLOQ9Y6V0 5065 aa13.9□□□□□ -0.18
TMEM260-202ENST00000538838 SMIM29Q86T20 159 aa13.9□□□□□ -0.19
TMEM260-202ENST00000538838 IGLV9-49A0A0B4J1Y8 123 aa13.89□□□□□ -0.19
TMEM260-202ENST00000538838 PPDPFLQ8WWR9 84 aa13.87□□□□□ -0.19
TMEM260-202ENST00000538838 OXTP01178 125 aa13.86□□□□□ -0.19
TMEM260-202ENST00000538838 LAMTOR3Q9UHA4 124 aa13.86□□□□□ -0.19
TMEM260-202ENST00000538838 H3BMG7 143 aa13.86□□□□□ -0.19
TMEM260-202ENST00000538838 MOBPQ13875 183 aa13.84□□□□□ -0.19
TMEM260-202ENST00000538838 KRTAP29-1A8MX34 341 aaPredicted RBP13.83□□□□□ -0.2
TMEM260-202ENST00000538838 C9JAW5 83 aa13.83□□□□□ -0.2
TMEM260-202ENST00000538838 GHRHP01286 108 aa13.83□□□□□ -0.2
TMEM260-202ENST00000538838 C9orf153Q5TBE3 101 aa13.83□□□□□ -0.2
TMEM260-202ENST00000538838 K7EP34 96 aa13.82□□□□□ -0.2
TMEM260-202ENST00000538838 TYMSOSQ8TAI1 123 aa13.82□□□□□ -0.2
TMEM260-202ENST00000538838 MT1HL1P0DM35 61 aa13.81□□□□□ -0.2
TMEM260-202ENST00000538838 KRTAP10-8P60410 259 aa13.81□□□□□ -0.2
TMEM260-202ENST00000538838 BAALC-AS2P0C853 105 aa13.8□□□□□ -0.2
TMEM260-202ENST00000538838 MTURNQ8N3F0 131 aa13.8□□□□□ -0.2
TMEM260-202ENST00000538838 H3BQ85 93 aa13.79□□□□□ -0.2
TMEM260-202ENST00000538838 TMEM256-PLSCR3K7ERE1 68 aa13.79□□□□□ -0.2
TMEM260-202ENST00000538838 F8WEM9 126 aa13.79□□□□□ -0.2
TMEM260-202ENST00000538838 NDUFV3P56181 108 aaKnown RBP13.78□□□□□ -0.2
TMEM260-202ENST00000538838 Q8NBF4 154 aa13.78□□□□□ -0.2
TMEM260-202ENST00000538838 TNXBP22105 4242 aa13.78□□□□□ -0.2
TMEM260-202ENST00000538838 GTF2H5Q6ZYL4 71 aa13.75□□□□□ -0.21
TMEM260-202ENST00000538838 A0A1B0GV72 72 aa13.74□□□□□ -0.21
TMEM260-202ENST00000538838 UBE2V1Q13404 147 aa13.74□□□□□ -0.21
TMEM260-202ENST00000538838 SSBP3-AS1Q7Z2R9 100 aa13.72□□□□□ -0.21
TMEM260-202ENST00000538838 ANKRD29Q8N6D5 301 aa13.72□□□□□ -0.21
TMEM260-202ENST00000538838 A0A1B0GV90 55 aa13.71□□□□□ -0.22
TMEM260-202ENST00000538838 J3QL48 77 aa13.71□□□□□ -0.22
TMEM260-202ENST00000538838 IGLV8-61A0A075B6I0 122 aa13.7□□□□□ -0.22
TMEM260-202ENST00000538838 A0A0G2JQZ4 141 aa13.7□□□□□ -0.22
TMEM260-202ENST00000538838 H3BT86 120 aa13.7□□□□□ -0.22
TMEM260-202ENST00000538838 LINC00304Q8N9R0 145 aa13.67□□□□□ -0.22
TMEM260-202ENST00000538838 PRO0461Q9UI25 63 aa13.67□□□□□ -0.22
TMEM260-202ENST00000538838 SMCPP49901 116 aaPredicted RBP13.66□□□□□ -0.22
TMEM260-202ENST00000538838 IGFL1Q6UW32 110 aa13.65□□□□□ -0.22
TMEM260-202ENST00000538838 Q6JHZ5 121 aa13.64□□□□□ -0.23
TMEM260-202ENST00000538838 DMBT1Q9UGM3 2413 aaPredicted RBP13.62□□□□□ -0.23
TMEM260-202ENST00000538838 HRCT1Q6UXD1 115 aa13.61□□□□□ -0.23
TMEM260-202ENST00000538838 RBM3P98179 157 aaKnown RBP13.59□□□□□ -0.23
TMEM260-202ENST00000538838 C4orf48Q5BLP8 95 aa13.58□□□□□ -0.24
TMEM260-202ENST00000538838 JMJD7-PLA2G4BH0Y9G9 81 aa13.57□□□□□ -0.24
TMEM260-202ENST00000538838 SPAG11AQ6PDA7 123 aa13.56□□□□□ -0.24
TMEM260-202ENST00000538838 OBSCN-AS1Q96MR7 158 aa13.56□□□□□ -0.24
TMEM260-202ENST00000538838 F8W1H4 67 aa13.55□□□□□ -0.24
TMEM260-202ENST00000538838 TRBV7-4A0A0J9YYF1 115 aa13.54□□□□□ -0.24
TMEM260-202ENST00000538838 DSCR8Q96T75 97 aa13.53□□□□□ -0.24
TMEM260-202ENST00000538838 CD164Q04900 197 aa13.53□□□□□ -0.24
TMEM260-202ENST00000538838 C14orf132Q9NPU4 83 aa13.53□□□□□ -0.24
TMEM260-202ENST00000538838 SPINK1P00995 79 aa13.52□□□□□ -0.25
TMEM260-202ENST00000538838 A0A1W2PNM2 257 aa13.5□□□□□ -0.25
TMEM260-202ENST00000538838 CCKP06307 115 aa13.48□□□□□ -0.25
TMEM260-202ENST00000538838 TEN1Q86WV5 123 aa13.47□□□□□ -0.25
TMEM260-202ENST00000538838 LOC110117498A0A087WWA1 95 aa13.46□□□□□ -0.25
TMEM260-202ENST00000538838 TRBV7-7A0A0K0K1E9 115 aa13.46□□□□□ -0.25
TMEM260-202ENST00000538838 Q6Q795 121 aa13.46□□□□□ -0.25
TMEM260-202ENST00000538838 Q6ZQT0 140 aa13.46□□□□□ -0.26
TMEM260-202ENST00000538838 VPS25Q9BRG1 176 aa13.46□□□□□ -0.26
TMEM260-202ENST00000538838 RPS29P62273 56 aaKnown RBP13.45□□□□□ -0.26
TMEM260-202ENST00000538838 ETDBQ3ZM63 59 aa13.44□□□□□ -0.26
TMEM260-202ENST00000538838 LIMD2Q9BT23 127 aa13.42□□□□□ -0.26
TMEM260-202ENST00000538838 PDE6GP18545 87 aa13.4□□□□□ -0.26
TMEM260-202ENST00000538838 HERC1Q15751 4861 aa13.39□□□□□ -0.27
TMEM260-202ENST00000538838 A0A087WSZ3 146 aa13.39□□□□□ -0.27
TMEM260-202ENST00000538838 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
TMEM260-202ENST00000538838 Q5XG85 94 aa13.36□□□□□ -0.27
TMEM260-202ENST00000538838 SS18L2Q9UHA2 77 aa13.31□□□□□ -0.28
TMEM260-202ENST00000538838 C21orf62-AS1Q17RA5 79 aa13.3□□□□□ -0.28
TMEM260-202ENST00000538838 ASB16-AS1Q495Z4 193 aa13.27□□□□□ -0.29
TMEM260-202ENST00000538838 C1orf195Q5TG92 126 aa13.26□□□□□ -0.29
TMEM260-202ENST00000538838 A0A1B0GW54 56 aa13.24□□□□□ -0.29
TMEM260-202ENST00000538838 PRR4Q16378 134 aa13.23□□□□□ -0.29
TMEM260-202ENST00000538838 Q96NJ1 140 aa13.2□□□□□ -0.3
TMEM260-202ENST00000538838 FP248Q71RG6 208 aaPredicted RBP13.17□□□□□ -0.3
TMEM260-202ENST00000538838 LINC00472Q9H8W2 130 aa13.15□□□□□ -0.3
TMEM260-202ENST00000538838 DEFB116Q30KQ4 102 aa13.14□□□□□ -0.31
TMEM260-202ENST00000538838 IGLV7-46A0A075B6I9 117 aa13.13□□□□□ -0.31
TMEM260-202ENST00000538838 LINC00846Q9NV44 126 aa13.13□□□□□ -0.31
TMEM260-202ENST00000538838 HMCN2Q8NDA2 5059 aa13.12□□□□□ -0.31
TMEM260-202ENST00000538838 NREPQ16612 68 aa13.12□□□□□ -0.31
TMEM260-202ENST00000538838 IGKV4-1P06312 121 aa13.09□□□□□ -0.31
TMEM260-202ENST00000538838 SIGMAR1Q99720 223 aa13.09□□□□□ -0.31
TMEM260-202ENST00000538838 Q6ZVQ6 151 aa13.08□□□□□ -0.32
TMEM260-202ENST00000538838 FAM240AA0A1B0GVK7 77 aa13.03□□□□□ -0.32
TMEM260-202ENST00000538838 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
TMEM260-202ENST00000538838 ACYP1P07311 99 aa13.02□□□□□ -0.33
TMEM260-202ENST00000538838 J3KT08 172 aa13□□□□□ -0.33
TMEM260-202ENST00000538838 TPRXLQ17RH7 258 aa12.99□□□□□ -0.33
TMEM260-202ENST00000538838 KRTAP13-3Q3SY46 172 aa12.99□□□□□ -0.33
TMEM260-202ENST00000538838 LPAP08519 4548 aa12.99□□□□□ -0.33
TMEM260-202ENST00000538838 J3QR89 54 aa12.97□□□□□ -0.33
TMEM260-202ENST00000538838 C9orf92A6NGG3 77 aa12.96□□□□□ -0.33
TMEM260-202ENST00000538838 BPY2O14599 106 aa12.95□□□□□ -0.34
TMEM260-202ENST00000538838 DSCR10P59022 87 aa12.92□□□□□ -0.34
TMEM260-202ENST00000538838 A8MWP4 228 aa12.91□□□□□ -0.34
TMEM260-202ENST00000538838 IGHV6-1A0A0B4J1U7 121 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms