RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 Q8N377 158 aa10.44□□□□□ -0.74
CLN6-202ENST00000538696 IGLV5-48A0A075B6I7 105 aa10.43□□□□□ -0.74
CLN6-202ENST00000538696 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
CLN6-202ENST00000538696 OBSCN-AS1Q96MR7 158 aa10.42□□□□□ -0.74
CLN6-202ENST00000538696 SRRM2Q9UQ35 2752 aaKnown RBP10.42□□□□□ -0.74
CLN6-202ENST00000538696 GHRHP01286 108 aa10.41□□□□□ -0.74
CLN6-202ENST00000538696 LAMTOR3Q9UHA4 124 aa10.4□□□□□ -0.74
CLN6-202ENST00000538696 NDUFV3P56181 108 aaKnown RBP10.38□□□□□ -0.75
CLN6-202ENST00000538696 C14orf132Q9NPU4 83 aa10.38□□□□□ -0.75
CLN6-202ENST00000538696 JMJD7-PLA2G4BH0Y9G9 81 aa10.36□□□□□ -0.75
CLN6-202ENST00000538696 K7ERU9 68 aa10.36□□□□□ -0.75
CLN6-202ENST00000538696 C3orf22Q8N5N4 141 aa10.36□□□□□ -0.75
CLN6-202ENST00000538696 GAGE2AQ6NT46 116 aa10.34□□□□□ -0.75
CLN6-202ENST00000538696 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
CLN6-202ENST00000538696 FLG2Q5D862 2391 aaPredicted RBP10.34□□□□□ -0.75
CLN6-202ENST00000538696 J3QR89 54 aa10.33□□□□□ -0.76
CLN6-202ENST00000538696 SPRR1BP22528 89 aa10.33□□□□□ -0.76
CLN6-202ENST00000538696 RBM3P98179 157 aaKnown RBP10.33□□□□□ -0.76
CLN6-202ENST00000538696 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
CLN6-202ENST00000538696 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
CLN6-202ENST00000538696 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
CLN6-202ENST00000538696 PCLOQ9Y6V0 5065 aa10.3□□□□□ -0.76
CLN6-202ENST00000538696 LOC110117498A0A087WWA1 95 aa10.29□□□□□ -0.76
CLN6-202ENST00000538696 ZNF706Q9Y5V0 76 aaPredicted RBP10.29□□□□□ -0.76
CLN6-202ENST00000538696 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
CLN6-202ENST00000538696 TRBV7-4A0A0J9YYF1 115 aa10.28□□□□□ -0.76
CLN6-202ENST00000538696 Q6ZQT0 140 aa10.28□□□□□ -0.76
CLN6-202ENST00000538696 DSCR8Q96T75 97 aa10.28□□□□□ -0.76
CLN6-202ENST00000538696 LINC00483Q53H64 154 aa10.27□□□□□ -0.77
CLN6-202ENST00000538696 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
CLN6-202ENST00000538696 F8WEM9 126 aa10.26□□□□□ -0.77
CLN6-202ENST00000538696 CCKP06307 115 aa10.26□□□□□ -0.77
CLN6-202ENST00000538696 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
CLN6-202ENST00000538696 FAM240AA0A1B0GVK7 77 aa10.23□□□□□ -0.77
CLN6-202ENST00000538696 IGLV8-61A0A075B6I0 122 aa10.22□□□□□ -0.77
CLN6-202ENST00000538696 PDE6GP18545 87 aa10.22□□□□□ -0.77
CLN6-202ENST00000538696 A0A087X002 238 aa10.2□□□□□ -0.78
CLN6-202ENST00000538696 VPS25Q9BRG1 176 aa10.2□□□□□ -0.78
CLN6-202ENST00000538696 CDIP1Q9H305 208 aa10.2□□□□□ -0.78
CLN6-202ENST00000538696 A0A0G2JQZ4 141 aa10.19□□□□□ -0.78
CLN6-202ENST00000538696 KRTAP29-1A8MX34 341 aaPredicted RBP10.19□□□□□ -0.78
CLN6-202ENST00000538696 OXTP01178 125 aa10.19□□□□□ -0.78
CLN6-202ENST00000538696 FAM229BQ4G0N7 80 aa10.19□□□□□ -0.78
CLN6-202ENST00000538696 PRR26Q8N8Z3 221 aa10.19□□□□□ -0.78
CLN6-202ENST00000538696 ACYP1P07311 99 aa10.18□□□□□ -0.78
CLN6-202ENST00000538696 IGFL1Q6UW32 110 aa10.18□□□□□ -0.78
CLN6-202ENST00000538696 IGLV9-49A0A0B4J1Y8 123 aa10.17□□□□□ -0.78
CLN6-202ENST00000538696 A0A1W2PNM2 257 aa10.17□□□□□ -0.78
CLN6-202ENST00000538696 MT1HL1P0DM35 61 aa10.16□□□□□ -0.78
CLN6-202ENST00000538696 CRYGAP11844 174 aa10.16□□□□□ -0.78
CLN6-202ENST00000538696 KRTAP13-2Q52LG2 175 aa10.16□□□□□ -0.78
CLN6-202ENST00000538696 TNXBP22105 4242 aa10.15□□□□□ -0.78
CLN6-202ENST00000538696 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.78
CLN6-202ENST00000538696 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
CLN6-202ENST00000538696 Q8NBF4 154 aa10.14□□□□□ -0.79
CLN6-202ENST00000538696 KRTAP10-8P60410 259 aa10.13□□□□□ -0.79
CLN6-202ENST00000538696 MOBPQ13875 183 aa10.13□□□□□ -0.79
CLN6-202ENST00000538696 C21orf62-AS1Q17RA5 79 aa10.13□□□□□ -0.79
CLN6-202ENST00000538696 Q6JHZ5 121 aa10.13□□□□□ -0.79
CLN6-202ENST00000538696 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
CLN6-202ENST00000538696 J3QL48 77 aa10.07□□□□□ -0.8
CLN6-202ENST00000538696 MT-ATP8P03928 68 aa10.05□□□□□ -0.8
CLN6-202ENST00000538696 Q6Q795 121 aa10.04□□□□□ -0.8
CLN6-202ENST00000538696 Q6ZVQ6 151 aa10.04□□□□□ -0.8
CLN6-202ENST00000538696 LINC00643Q86TS7 51 aa10.04□□□□□ -0.8
CLN6-202ENST00000538696 UBL5Q9BZL1 73 aa10.04□□□□□ -0.8
CLN6-202ENST00000538696 A0A1B0GW54 56 aa10.02□□□□□ -0.81
CLN6-202ENST00000538696 A0A087WSZ3 146 aa10.01□□□□□ -0.81
CLN6-202ENST00000538696 HRCT1Q6UXD1 115 aa10.01□□□□□ -0.81
CLN6-202ENST00000538696 SSBP3-AS1Q7Z2R9 100 aa10□□□□□ -0.81
CLN6-202ENST00000538696 DMBT1Q9UGM3 2413 aaPredicted RBP10□□□□□ -0.81
CLN6-202ENST00000538696 TRBV7-7A0A0K0K1E9 115 aa9.99□□□□□ -0.81
CLN6-202ENST00000538696 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
CLN6-202ENST00000538696 IGKV3D-7A0A0C4DH55 119 aa9.98□□□□□ -0.81
CLN6-202ENST00000538696 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
CLN6-202ENST00000538696 NREPQ16612 68 aa9.97□□□□□ -0.81
CLN6-202ENST00000538696 CD164Q04900 197 aa9.92□□□□□ -0.82
CLN6-202ENST00000538696 ATP5EP2Q5VTU8 51 aa9.92□□□□□ -0.82
CLN6-202ENST00000538696 SPAG11AQ6PDA7 123 aa9.9□□□□□ -0.82
CLN6-202ENST00000538696 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
CLN6-202ENST00000538696 HERC1Q15751 4861 aa9.88□□□□□ -0.83
CLN6-202ENST00000538696 BPY2O14599 106 aa9.87□□□□□ -0.83
CLN6-202ENST00000538696 CXCL6P80162 114 aa9.87□□□□□ -0.83
CLN6-202ENST00000538696 SPINK1P00995 79 aa9.86□□□□□ -0.83
CLN6-202ENST00000538696 DEFB116Q30KQ4 102 aa9.86□□□□□ -0.83
CLN6-202ENST00000538696 SS18L2Q9UHA2 77 aa9.86□□□□□ -0.83
CLN6-202ENST00000538696 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
CLN6-202ENST00000538696 Q96NJ1 140 aa9.84□□□□□ -0.83
CLN6-202ENST00000538696 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
CLN6-202ENST00000538696 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
CLN6-202ENST00000538696 DSCR10P59022 87 aa9.82□□□□□ -0.84
CLN6-202ENST00000538696 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
CLN6-202ENST00000538696 Q8N9L7 120 aa9.82□□□□□ -0.84
CLN6-202ENST00000538696 A0A087WVE0 104 aa9.81□□□□□ -0.84
CLN6-202ENST00000538696 IGKV4-1P06312 121 aa9.79□□□□□ -0.84
CLN6-202ENST00000538696 ASB16-AS1Q495Z4 193 aa9.78□□□□□ -0.84
CLN6-202ENST00000538696 Q5XG85 94 aa9.78□□□□□ -0.84
CLN6-202ENST00000538696 LIMD2Q9BT23 127 aa9.78□□□□□ -0.84
CLN6-202ENST00000538696 RETNLBQ9BQ08 111 aa9.77□□□□□ -0.85
CLN6-202ENST00000538696 K7EQZ3 153 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms