RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 IGKV2-24A0A0C4DH68 120 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 ETDCA0A1B0GVM5 59 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 Q6ZSA8 131 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 CSMD1Q96PZ7 3565 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 BCE1O60756 84 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 Q8N1X5 172 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 C6orf48Q9UBA6 75 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 hDV103S1A0JD37 113 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
PTPN22-211ENST00000538253 SPINK6Q6UWN8 80 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
PTPN22-211ENST00000538253 Q5VV11 94 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
PTPN22-211ENST00000538253 PRAC1Q96KF2 57 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 C22orf24Q9Y442 160 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 ZNF469Q96JG9 3925 aaPredicted RBP2.29□□□□□ -2.04
PTPN22-211ENST00000538253 ALMS1Q8TCU4 4167 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 A0A087WYN8 130 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 DNAL4O96015 105 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 MIR7-3HGQ8N6C7 128 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 SND1-IT1Q9HBX3 110 aa2.29□□□□□ -2.04
PTPN22-211ENST00000538253 IGLV1-50A0A075B6I6 118 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 RPL37AP8A6NKH3 93 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 H0YGX0 51 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 FAM218AQ96MZ4 157 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 A0A096LNI7 61 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 CHKB-CPT1BH3BT56 60 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 SCXQ7RTU7 201 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 PCLOQ9Y6V0 5065 aa2.28□□□□□ -2.04
PTPN22-211ENST00000538253 MEGF8Q7Z7M0 2845 aa2.28□□□□□ -2.05
PTPN22-211ENST00000538253 CSMD2Q7Z408 3487 aa2.28□□□□□ -2.05
PTPN22-211ENST00000538253 KRTAP10-1P60331 282 aa2.28□□□□□ -2.05
PTPN22-211ENST00000538253 KRTAP10-2P60368 255 aa2.28□□□□□ -2.05
PTPN22-211ENST00000538253 TRBV7-4A0A0J9YYF1 115 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 SPAG11AQ6PDA7 123 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 ATP5EP2Q5VTU8 51 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
PTPN22-211ENST00000538253 PSORS1C2Q9UIG4 136 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 TENM3Q9P273 2699 aa2.27□□□□□ -2.05
PTPN22-211ENST00000538253 TSPEAR-AS2P59090 65 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 CIRBP-AS1Q8TBR5 109 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 LINC00308Q8TCZ7 52 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 FAM104AQ969W3 186 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 TRBV10-3A0A0K0K1G6 114 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 ZNF861PO60384 105 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 COX7BP24311 80 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 MOBPQ13875 183 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 Q5VSD8 79 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 TMEM254Q8TBM7 123 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 IGLV7-43P04211 117 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 C1orf64Q8NEQ6 169 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 C14orf132Q9NPU4 83 aa2.26□□□□□ -2.05
PTPN22-211ENST00000538253 ADM2Q7Z4H4 148 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 RETNLBQ9BQ08 111 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 KCNQ1DNQ9H478 68 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 XAGE1AQ9HD64 81 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 C10orf25Q5T742 122 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 LINC00167Q96N53 147 aa2.25□□□□□ -2.05
PTPN22-211ENST00000538253 C9orf129Q5T035 196 aaKnown RBP2.25□□□□□ -2.05
PTPN22-211ENST00000538253 CDC42SE1Q9NRR8 79 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 SSBP3-AS1Q7Z2R9 100 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.24□□□□□ -2.05
PTPN22-211ENST00000538253 TGP01266 2768 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 A6NED7 52 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 SLPIP03973 132 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.24□□□□□ -2.05
PTPN22-211ENST00000538253 OBSCN-AS1Q96MR7 158 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 LIMD2Q9BT23 127 aa2.24□□□□□ -2.05
PTPN22-211ENST00000538253 HUWE1Q7Z6Z7 4374 aaKnown RBP2.24□□□□□ -2.05
PTPN22-211ENST00000538253 ERC2-IT1O76042 136 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 IGLV6-57P01721 117 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 CYP4F30PQ9H0H9 118 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 CHTF8P0CG12 524 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 RYR3Q15413 4870 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 A0A1W2PNN7 141 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 KRTAP29-1A8MX34 341 aaPredicted RBP2.23□□□□□ -2.05
PTPN22-211ENST00000538253 NCR3O14931 201 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 PDE6GP18545 87 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 NREPQ16612 68 aa2.23□□□□□ -2.05
PTPN22-211ENST00000538253 SVEP1Q4LDE5 3571 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 DYNC2H1Q8NCM8 4307 aaKnown RBP2.22□□□□□ -2.05
PTPN22-211ENST00000538253 SPRR1AP35321 89 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 Q6ZRX8 168 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 HIGD2AQ9BW72 106 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
PTPN22-211ENST00000538253 A0A1B0GW54 56 aa2.21□□□□□ -2.05
PTPN22-211ENST00000538253 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.05
PTPN22-211ENST00000538253 LITAFQ99732 161 aa2.21□□□□□ -2.05
PTPN22-211ENST00000538253 RPS29P62273 56 aaKnown RBP2.21□□□□□ -2.06
PTPN22-211ENST00000538253 TRRAPQ9Y4A5 3859 aa2.21□□□□□ -2.06
PTPN22-211ENST00000538253 ELOF1P60002 83 aaKnown RBP2.21□□□□□ -2.06
PTPN22-211ENST00000538253 Q8N9P0 234 aaPredicted RBP2.21□□□□□ -2.06
PTPN22-211ENST00000538253 Q8NBF4 154 aa2.21□□□□□ -2.06
PTPN22-211ENST00000538253 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms