RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SMIM29Q86T20 159 aa5.48□□□□□ -1.53
UBE3B-208ENST00000538070 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 Q8NBF4 154 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 LY6G6CO95867 125 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 SPRR1AP35321 89 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 DNAH9Q9NYC9 4486 aa5.47□□□□□ -1.53
UBE3B-208ENST00000538070 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
UBE3B-208ENST00000538070 IGLV5-48A0A075B6I7 105 aa5.46□□□□□ -1.53
UBE3B-208ENST00000538070 NUPR2A6NF83 97 aa5.46□□□□□ -1.53
UBE3B-208ENST00000538070 K7EQZ3 153 aa5.46□□□□□ -1.53
UBE3B-208ENST00000538070 IGFL1Q6UW32 110 aa5.46□□□□□ -1.53
UBE3B-208ENST00000538070 ANAPC11Q9NYG5 84 aa5.46□□□□□ -1.53
UBE3B-208ENST00000538070 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
UBE3B-208ENST00000538070 H3BS24 57 aa5.46□□□□□ -1.54
UBE3B-208ENST00000538070 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
UBE3B-208ENST00000538070 TMEM258P61165 79 aa5.45□□□□□ -1.54
UBE3B-208ENST00000538070 PRR4Q16378 134 aa5.45□□□□□ -1.54
UBE3B-208ENST00000538070 CNBPP62633 177 aaKnown RBP5.45□□□□□ -1.54
UBE3B-208ENST00000538070 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
UBE3B-208ENST00000538070 H0Y9J4 135 aa5.43□□□□□ -1.54
UBE3B-208ENST00000538070 TMEM254Q8TBM7 123 aa5.43□□□□□ -1.54
UBE3B-208ENST00000538070 LRCOL1A6NCL2 159 aa5.43□□□□□ -1.54
UBE3B-208ENST00000538070 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
UBE3B-208ENST00000538070 TNP2Q05952 138 aa5.41□□□□□ -1.54
UBE3B-208ENST00000538070 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
UBE3B-208ENST00000538070 H7BZZ5 65 aa5.41□□□□□ -1.54
UBE3B-208ENST00000538070 DSCR10P59022 87 aa5.41□□□□□ -1.54
UBE3B-208ENST00000538070 RTL8CO15255 209 aa5.4□□□□□ -1.54
UBE3B-208ENST00000538070 A0A087WTM6 91 aa5.4□□□□□ -1.55
UBE3B-208ENST00000538070 OXTP01178 125 aa5.4□□□□□ -1.55
UBE3B-208ENST00000538070 LINC00336Q6ZUF6 198 aa5.39□□□□□ -1.55
UBE3B-208ENST00000538070 DNHD1Q96M86 4753 aa5.39□□□□□ -1.55
UBE3B-208ENST00000538070 IGLV5-52A0A0A0MRZ9 124 aa5.39□□□□□ -1.55
UBE3B-208ENST00000538070 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
UBE3B-208ENST00000538070 SPINK6Q6UWN8 80 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 LINC00474Q9P2X8 69 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 BCE1O60756 84 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 SPRR4Q96PI1 79 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 HCG22E2RYF7 251 aa5.37□□□□□ -1.55
UBE3B-208ENST00000538070 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
UBE3B-208ENST00000538070 MOBPQ13875 183 aa5.36□□□□□ -1.55
UBE3B-208ENST00000538070 C1orf134Q5TEV5 83 aa5.36□□□□□ -1.55
UBE3B-208ENST00000538070 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
UBE3B-208ENST00000538070 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
UBE3B-208ENST00000538070 PSORS1C2Q9UIG4 136 aa5.36□□□□□ -1.55
UBE3B-208ENST00000538070 KMT2AQ03164 3969 aa5.35□□□□□ -1.55
UBE3B-208ENST00000538070 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
UBE3B-208ENST00000538070 NDUFS5O43920 106 aa5.35□□□□□ -1.55
UBE3B-208ENST00000538070 LINC00208Q96KT6 92 aa5.34□□□□□ -1.56
UBE3B-208ENST00000538070 SPACA4Q8TDM5 124 aa5.33□□□□□ -1.56
UBE3B-208ENST00000538070 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
UBE3B-208ENST00000538070 CIRBP-AS1Q8TBR5 109 aa5.32□□□□□ -1.56
UBE3B-208ENST00000538070 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
UBE3B-208ENST00000538070 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
UBE3B-208ENST00000538070 NDUFB1O75438 58 aa5.3□□□□□ -1.56
UBE3B-208ENST00000538070 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
UBE3B-208ENST00000538070 MP68P56378 58 aa5.3□□□□□ -1.56
UBE3B-208ENST00000538070 SERP1Q9Y6X1 66 aa5.3□□□□□ -1.56
UBE3B-208ENST00000538070 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
UBE3B-208ENST00000538070 A0A1B0GW54 56 aa5.29□□□□□ -1.56
UBE3B-208ENST00000538070 NDUFC1O43677 76 aa5.29□□□□□ -1.56
UBE3B-208ENST00000538070 KRTAP10-2P60368 255 aa5.28□□□□□ -1.56
UBE3B-208ENST00000538070 H0Y9P7 68 aa5.27□□□□□ -1.57
UBE3B-208ENST00000538070 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
UBE3B-208ENST00000538070 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
UBE3B-208ENST00000538070 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
UBE3B-208ENST00000538070 FRAS1Q86XX4 4008 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 A8MWP4 228 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 ZNF861PO60384 105 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 Q6ZR54 194 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 RETNLBQ9BQ08 111 aa5.26□□□□□ -1.57
UBE3B-208ENST00000538070 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
UBE3B-208ENST00000538070 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
UBE3B-208ENST00000538070 SPRR1BP22528 89 aa5.24□□□□□ -1.57
UBE3B-208ENST00000538070 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
UBE3B-208ENST00000538070 ZNF706Q9Y5V0 76 aaPredicted RBP5.24□□□□□ -1.57
UBE3B-208ENST00000538070 Q5XG85 94 aa5.24□□□□□ -1.57
UBE3B-208ENST00000538070 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
UBE3B-208ENST00000538070 VPS13DQ5THJ4 4388 aa5.23□□□□□ -1.57
UBE3B-208ENST00000538070 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
UBE3B-208ENST00000538070 SMIM26A0A096LP01 95 aa5.22□□□□□ -1.57
UBE3B-208ENST00000538070 WWC2-AS2Q96NR7 200 aa5.22□□□□□ -1.57
UBE3B-208ENST00000538070 HECTD4Q9Y4D8 3996 aa5.22□□□□□ -1.57
UBE3B-208ENST00000538070 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
UBE3B-208ENST00000538070 PLAC8Q9NZF1 115 aa5.22□□□□□ -1.57
UBE3B-208ENST00000538070 A0A087X002 238 aa5.21□□□□□ -1.57
UBE3B-208ENST00000538070 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.57
UBE3B-208ENST00000538070 NOTCH2NLQ7Z3S9 236 aa5.21□□□□□ -1.57
UBE3B-208ENST00000538070 DNAH11Q96DT5 4516 aa5.21□□□□□ -1.57
UBE3B-208ENST00000538070 CD164Q04900 197 aa5.21□□□□□ -1.58
UBE3B-208ENST00000538070 MMP24-AS1A0A0U1RRL7 71 aa5.2□□□□□ -1.58
UBE3B-208ENST00000538070 DNAH6Q9C0G6 4158 aa5.19□□□□□ -1.58
UBE3B-208ENST00000538070 PSPHP1O15172 72 aa5.19□□□□□ -1.58
UBE3B-208ENST00000538070 DYNC2H1Q8NCM8 4307 aaKnown RBP5.19□□□□□ -1.58
UBE3B-208ENST00000538070 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
UBE3B-208ENST00000538070 KRTAP10-1P60331 282 aa5.19□□□□□ -1.58
UBE3B-208ENST00000538070 C8orf17Q9NRJ1 99 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms