RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
USP44-203ENST00000537435 A0A087WSZ3 146 aa8.95□□□□□ -0.98
USP44-203ENST00000537435 SMIM26A0A096LP01 95 aa8.95□□□□□ -0.98
USP44-203ENST00000537435 UBE2AP49459 152 aa8.95□□□□□ -0.98
USP44-203ENST00000537435 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
USP44-203ENST00000537435 LCE6AA0A183 80 aa8.94□□□□□ -0.98
USP44-203ENST00000537435 MGAM2Q2M2H8 2515 aa8.94□□□□□ -0.98
USP44-203ENST00000537435 HCG22E2RYF7 251 aa8.93□□□□□ -0.98
USP44-203ENST00000537435 FP248Q71RG6 208 aaPredicted RBP8.93□□□□□ -0.98
USP44-203ENST00000537435 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
USP44-203ENST00000537435 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
USP44-203ENST00000537435 C9orf163Q8N9P6 203 aa8.9□□□□□ -0.99
USP44-203ENST00000537435 H0Y9J4 135 aa8.89□□□□□ -0.99
USP44-203ENST00000537435 LRCOL1A6NCL2 159 aa8.88□□□□□ -0.99
USP44-203ENST00000537435 SPRR1BP22528 89 aa8.88□□□□□ -0.99
USP44-203ENST00000537435 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
USP44-203ENST00000537435 WFDC13Q8IUB5 93 aa8.88□□□□□ -0.99
USP44-203ENST00000537435 COL7A1Q02388 2944 aa8.87□□□□□ -0.99
USP44-203ENST00000537435 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
USP44-203ENST00000537435 FAM229BQ4G0N7 80 aa8.87□□□□□ -0.99
USP44-203ENST00000537435 NBDYA0A0U1RRE5 68 aa8.85□□□□□ -0.99
USP44-203ENST00000537435 PANO1I0J062 215 aa8.84□□□□□ -0.99
USP44-203ENST00000537435 B9D2Q9BPU9 175 aa8.84□□□□□ -0.99
USP44-203ENST00000537435 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
USP44-203ENST00000537435 PKIGQ9Y2B9 76 aa8.82□□□□□ -1
USP44-203ENST00000537435 Q6ZRN7 208 aaPredicted RBP8.81□□□□□ -1
USP44-203ENST00000537435 MDFIQ99750 246 aa8.81□□□□□ -1
USP44-203ENST00000537435 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
USP44-203ENST00000537435 CSMD3Q7Z407 3707 aa8.8□□□□□ -1
USP44-203ENST00000537435 DNAH7Q8WXX0 4024 aa8.8□□□□□ -1
USP44-203ENST00000537435 SRRM2Q9UQ35 2752 aaKnown RBP8.8□□□□□ -1
USP44-203ENST00000537435 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
USP44-203ENST00000537435 PRR15Q8IV56 129 aa8.79□□□□□ -1
USP44-203ENST00000537435 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
USP44-203ENST00000537435 KRTAP13-1Q8IUC0 172 aa8.79□□□□□ -1
USP44-203ENST00000537435 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
USP44-203ENST00000537435 NUPR2A6NF83 97 aa8.78□□□□□ -1
USP44-203ENST00000537435 A8MWP4 228 aa8.78□□□□□ -1
USP44-203ENST00000537435 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
USP44-203ENST00000537435 CASC2Q6XLA1 102 aa8.78□□□□□ -1
USP44-203ENST00000537435 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
USP44-203ENST00000537435 MP68P56378 58 aa8.77□□□□□ -1.01
USP44-203ENST00000537435 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
USP44-203ENST00000537435 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
USP44-203ENST00000537435 C1orf64Q8NEQ6 169 aa8.76□□□□□ -1.01
USP44-203ENST00000537435 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
USP44-203ENST00000537435 PRR4Q16378 134 aa8.74□□□□□ -1.01
USP44-203ENST00000537435 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
USP44-203ENST00000537435 NDUFB1O75438 58 aa8.73□□□□□ -1.01
USP44-203ENST00000537435 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
USP44-203ENST00000537435 TRAV22A0A0B4J277 110 aa8.72□□□□□ -1.01
USP44-203ENST00000537435 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
USP44-203ENST00000537435 H0Y9P7 68 aa8.71□□□□□ -1.01
USP44-203ENST00000537435 A0A087WTM6 91 aa8.7□□□□□ -1.02
USP44-203ENST00000537435 PRO0628Q9UI54 55 aa8.7□□□□□ -1.02
USP44-203ENST00000537435 MMP24-AS1A0A0U1RRL7 71 aa8.69□□□□□ -1.02
USP44-203ENST00000537435 H3BPC8 53 aa8.67□□□□□ -1.02
USP44-203ENST00000537435 LINC00483Q53H64 154 aa8.66□□□□□ -1.02
USP44-203ENST00000537435 Q96NJ1 140 aa8.66□□□□□ -1.02
USP44-203ENST00000537435 VPS13DQ5THJ4 4388 aa8.66□□□□□ -1.02
USP44-203ENST00000537435 RTL8CO15255 209 aa8.65□□□□□ -1.02
USP44-203ENST00000537435 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
USP44-203ENST00000537435 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
USP44-203ENST00000537435 STARD9Q9P2P6 4700 aa8.63□□□□□ -1.03
USP44-203ENST00000537435 MOBPQ13875 183 aa8.63□□□□□ -1.03
USP44-203ENST00000537435 IGLV5-52A0A0A0MRZ9 124 aa8.62□□□□□ -1.03
USP44-203ENST00000537435 ZNF706Q9Y5V0 76 aaPredicted RBP8.62□□□□□ -1.03
USP44-203ENST00000537435 Q1T7F1 81 aa8.62□□□□□ -1.03
USP44-203ENST00000537435 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
USP44-203ENST00000537435 SPANXA2-OT1Q8N9U9 137 aa8.61□□□□□ -1.03
USP44-203ENST00000537435 ANAPC11Q9NYG5 84 aa8.6□□□□□ -1.03
USP44-203ENST00000537435 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
USP44-203ENST00000537435 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
USP44-203ENST00000537435 ZNF861PO60384 105 aa8.58□□□□□ -1.04
USP44-203ENST00000537435 C8orf17Q9NRJ1 99 aa8.58□□□□□ -1.04
USP44-203ENST00000537435 Q6ZR54 194 aa8.58□□□□□ -1.04
USP44-203ENST00000537435 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
USP44-203ENST00000537435 IGHV6-1A0A0B4J1U7 121 aa8.56□□□□□ -1.04
USP44-203ENST00000537435 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
USP44-203ENST00000537435 PRKDCP78527 4128 aaKnown RBP8.55□□□□□ -1.04
USP44-203ENST00000537435 TP53AIP1Q9HCN2 124 aa8.55□□□□□ -1.04
USP44-203ENST00000537435 PSPHP1O15172 72 aa8.54□□□□□ -1.04
USP44-203ENST00000537435 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
USP44-203ENST00000537435 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
USP44-203ENST00000537435 DNAH17Q9UFH2 4485 aa8.54□□□□□ -1.04
USP44-203ENST00000537435 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
USP44-203ENST00000537435 DNAH2Q9P225 4427 aa8.53□□□□□ -1.04
USP44-203ENST00000537435 KMT2AQ03164 3969 aa8.53□□□□□ -1.04
USP44-203ENST00000537435 NDUFS5O43920 106 aa8.52□□□□□ -1.05
USP44-203ENST00000537435 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
USP44-203ENST00000537435 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
USP44-203ENST00000537435 C1orf134Q5TEV5 83 aa8.5□□□□□ -1.05
USP44-203ENST00000537435 MRPL34Q9BQ48 92 aaKnown RBP8.49□□□□□ -1.05
USP44-203ENST00000537435 A0A087X002 238 aa8.49□□□□□ -1.05
USP44-203ENST00000537435 NOTCH2NLQ7Z3S9 236 aa8.49□□□□□ -1.05
USP44-203ENST00000537435 V9GYY9 64 aa8.49□□□□□ -1.05
USP44-203ENST00000537435 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
USP44-203ENST00000537435 A8MUN3 132 aa8.47□□□□□ -1.05
USP44-203ENST00000537435 CD164Q04900 197 aa8.47□□□□□ -1.05
USP44-203ENST00000537435 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms