RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 A0A087WSZ3 146 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 MMP24-AS1A0A0U1RRL7 71 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 A8MWP4 228 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 CHKB-CPT1BH3BT56 60 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 ATP11AUNQ6ZP68 121 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
CPSF7-215ENST00000536145 COA5Q86WW8 74 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 RETNQ9HD89 108 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 ACANP16112 2415 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 HIVEP2P31629 2446 aa4.31□□□□□ -1.72
CPSF7-215ENST00000536145 CENPEQ02224 2701 aa4.3□□□□□ -1.72
CPSF7-215ENST00000536145 ITPR3Q14573 2671 aa4.3□□□□□ -1.72
CPSF7-215ENST00000536145 NDUFS5O43920 106 aa4.29□□□□□ -1.72
CPSF7-215ENST00000536145 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
CPSF7-215ENST00000536145 PRB2P02812 416 aaPredicted RBP4.28□□□□□ -1.72
CPSF7-215ENST00000536145 RBM12B-AS1Q9P1G2 102 aa4.28□□□□□ -1.72
CPSF7-215ENST00000536145 KRTAP24-1Q3LI83 254 aa4.27□□□□□ -1.73
CPSF7-215ENST00000536145 TEX15Q9BXT5 2789 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 FN1P02751 2386 aaKnown RBP4.26□□□□□ -1.73
CPSF7-215ENST00000536145 SETXQ7Z333 2677 aaKnown RBP4.26□□□□□ -1.73
CPSF7-215ENST00000536145 MXRA5Q9NR99 2828 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 DEFB131BA0A096LNP1 70 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 H0Y9J4 135 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 PRLHP81277 87 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 Q6ZR54 194 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 F8P00451 2351 aa4.26□□□□□ -1.73
CPSF7-215ENST00000536145 SONP18583 2426 aaKnown RBP4.25□□□□□ -1.73
CPSF7-215ENST00000536145 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
CPSF7-215ENST00000536145 MOBPQ13875 183 aa4.25□□□□□ -1.73
CPSF7-215ENST00000536145 Q96NJ1 140 aa4.25□□□□□ -1.73
CPSF7-215ENST00000536145 HIVEP1P15822 2718 aa4.25□□□□□ -1.73
CPSF7-215ENST00000536145 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
CPSF7-215ENST00000536145 MAP1AP78559 2803 aaPredicted RBP4.24□□□□□ -1.73
CPSF7-215ENST00000536145 ZANQ9Y493 2812 aa4.24□□□□□ -1.73
CPSF7-215ENST00000536145 A0A096LNI7 61 aa4.24□□□□□ -1.73
CPSF7-215ENST00000536145 FLNAP21333 2647 aaKnown RBP4.24□□□□□ -1.73
CPSF7-215ENST00000536145 TLN2Q9Y4G6 2542 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 CUBNO60494 3623 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 A6NED7 52 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 LCE2BO14633 110 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 C7orf65Q6ZTY9 151 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 JMJD1CQ15652 2540 aa4.23□□□□□ -1.73
CPSF7-215ENST00000536145 HRES1P13985 223 aa4.22□□□□□ -1.73
CPSF7-215ENST00000536145 C11orf45Q8TAV5 145 aa4.22□□□□□ -1.73
CPSF7-215ENST00000536145 MDFIQ99750 246 aa4.22□□□□□ -1.73
CPSF7-215ENST00000536145 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
CPSF7-215ENST00000536145 SPINK7P58062 85 aa4.21□□□□□ -1.74
CPSF7-215ENST00000536145 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
CPSF7-215ENST00000536145 SPTSSBQ8NFR3 76 aa4.21□□□□□ -1.74
CPSF7-215ENST00000536145 C8orf17Q9NRJ1 99 aa4.21□□□□□ -1.74
CPSF7-215ENST00000536145 IGKV2-24A0A0C4DH68 120 aa4.2□□□□□ -1.74
CPSF7-215ENST00000536145 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
CPSF7-215ENST00000536145 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
CPSF7-215ENST00000536145 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
CPSF7-215ENST00000536145 DNAH1Q9P2D7 4330 aa4.17□□□□□ -1.74
CPSF7-215ENST00000536145 MTORP42345 2549 aa4.17□□□□□ -1.74
CPSF7-215ENST00000536145 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
CPSF7-215ENST00000536145 SPAG11AQ6PDA7 123 aa4.17□□□□□ -1.74
CPSF7-215ENST00000536145 A0A1B0GVX0 72 aa4.16□□□□□ -1.74
CPSF7-215ENST00000536145 LINC00483Q53H64 154 aa4.16□□□□□ -1.74
CPSF7-215ENST00000536145 KRTAP1-5Q9BYS1 174 aa4.16□□□□□ -1.74
CPSF7-215ENST00000536145 MRPL34Q9BQ48 92 aaKnown RBP4.15□□□□□ -1.75
CPSF7-215ENST00000536145 A0A087X002 238 aa4.14□□□□□ -1.75
CPSF7-215ENST00000536145 TEP1Q99973 2627 aaKnown RBP4.13□□□□□ -1.75
CPSF7-215ENST00000536145 PLA2G1BP04054 148 aaKnown RBP4.12□□□□□ -1.75
CPSF7-215ENST00000536145 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
CPSF7-215ENST00000536145 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
CPSF7-215ENST00000536145 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
CPSF7-215ENST00000536145 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
CPSF7-215ENST00000536145 Q5W150 140 aa4.11□□□□□ -1.75
CPSF7-215ENST00000536145 MAST4O15021 2626 aa4.11□□□□□ -1.75
CPSF7-215ENST00000536145 NF1P21359 2839 aa4.11□□□□□ -1.75
CPSF7-215ENST00000536145 NSD1Q96L73 2696 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-215ENST00000536145 PANO1I0J062 215 aa4.1□□□□□ -1.75
CPSF7-215ENST00000536145 K7EIL1 84 aa4.1□□□□□ -1.75
CPSF7-215ENST00000536145 LINC00313P59037 77 aa4.1□□□□□ -1.75
CPSF7-215ENST00000536145 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
CPSF7-215ENST00000536145 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
CPSF7-215ENST00000536145 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
CPSF7-215ENST00000536145 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
CPSF7-215ENST00000536145 RTL8CO15255 209 aa4.09□□□□□ -1.75
CPSF7-215ENST00000536145 DMAC1Q96GE9 116 aa4.09□□□□□ -1.75
CPSF7-215ENST00000536145 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CPSF7-215ENST00000536145 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.76
CPSF7-215ENST00000536145 IGLV9-49A0A0B4J1Y8 123 aa4.07□□□□□ -1.76
CPSF7-215ENST00000536145 ACYP2P14621 99 aa4.07□□□□□ -1.76
CPSF7-215ENST00000536145 SETD2Q9BYW2 2564 aaPredicted RBP4.06□□□□□ -1.76
CPSF7-215ENST00000536145 ADM2Q7Z4H4 148 aa4.06□□□□□ -1.76
CPSF7-215ENST00000536145 SPACA4Q8TDM5 124 aa4.06□□□□□ -1.76
CPSF7-215ENST00000536145 APLNQ9ULZ1 77 aa4.06□□□□□ -1.76
CPSF7-215ENST00000536145 CDK2AP2O75956 126 aa4.05□□□□□ -1.76
CPSF7-215ENST00000536145 Q6ZRN7 208 aaPredicted RBP4.05□□□□□ -1.76
CPSF7-215ENST00000536145 ZNF706Q9Y5V0 76 aaPredicted RBP4.05□□□□□ -1.76
CPSF7-215ENST00000536145 ATRQ13535 2644 aa4.05□□□□□ -1.76
CPSF7-215ENST00000536145 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.04□□□□□ -1.76
CPSF7-215ENST00000536145 ALMS1Q8TCU4 4167 aa4.04□□□□□ -1.76
CPSF7-215ENST00000536145 TRRAPQ9Y4A5 3859 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms