RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CRCT1Q9UGL9 99 aa6.2□□□□□ -1.42
CLSTN3-206ENST00000535668 ERC2-IT1O76042 136 aa6.19□□□□□ -1.42
CLSTN3-206ENST00000535668 CBY1Q9Y3M2 126 aa6.19□□□□□ -1.42
CLSTN3-206ENST00000535668 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
CLSTN3-206ENST00000535668 CFC1P0CG37 223 aa6.18□□□□□ -1.42
CLSTN3-206ENST00000535668 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
CLSTN3-206ENST00000535668 LITAFQ99732 161 aa6.18□□□□□ -1.42
CLSTN3-206ENST00000535668 A4D1N5 150 aa6.17□□□□□ -1.42
CLSTN3-206ENST00000535668 SPRR1BP22528 89 aa6.17□□□□□ -1.42
CLSTN3-206ENST00000535668 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
CLSTN3-206ENST00000535668 A0A0U1RRA0 63 aa6.16□□□□□ -1.42
CLSTN3-206ENST00000535668 MOBPQ13875 183 aa6.16□□□□□ -1.42
CLSTN3-206ENST00000535668 OCIAD2Q56VL3 154 aa6.16□□□□□ -1.42
CLSTN3-206ENST00000535668 MEIG1Q5JSS6 88 aa6.16□□□□□ -1.42
CLSTN3-206ENST00000535668 K7ERJ3 54 aa6.15□□□□□ -1.42
CLSTN3-206ENST00000535668 NCR3O14931 201 aa6.15□□□□□ -1.42
CLSTN3-206ENST00000535668 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
CLSTN3-206ENST00000535668 H3BMG7 143 aa6.14□□□□□ -1.43
CLSTN3-206ENST00000535668 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
CLSTN3-206ENST00000535668 ATXN8Q156A1 80 aa6.14□□□□□ -1.43
CLSTN3-206ENST00000535668 MT1HP80294 61 aa6.13□□□□□ -1.43
CLSTN3-206ENST00000535668 Q5XG85 94 aa6.13□□□□□ -1.43
CLSTN3-206ENST00000535668 LINC00308Q8TCZ7 52 aa6.13□□□□□ -1.43
CLSTN3-206ENST00000535668 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
CLSTN3-206ENST00000535668 PSMB2P49721 201 aa6.12□□□□□ -1.43
CLSTN3-206ENST00000535668 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
CLSTN3-206ENST00000535668 CD164Q04900 197 aa6.11□□□□□ -1.43
CLSTN3-206ENST00000535668 TRAV23DV6A0A075B6W5 121 aa6.1□□□□□ -1.43
CLSTN3-206ENST00000535668 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
CLSTN3-206ENST00000535668 Q1RN00 199 aa6.1□□□□□ -1.43
CLSTN3-206ENST00000535668 ADAMTSL4-AS1Q5T5F5 129 aa6.1□□□□□ -1.43
CLSTN3-206ENST00000535668 PRO0461Q9UI25 63 aa6.1□□□□□ -1.43
CLSTN3-206ENST00000535668 H3BT86 120 aa6.09□□□□□ -1.43
CLSTN3-206ENST00000535668 LIMD2Q9BT23 127 aa6.09□□□□□ -1.43
CLSTN3-206ENST00000535668 H0YGX0 51 aa6.08□□□□□ -1.44
CLSTN3-206ENST00000535668 TEN1Q86WV5 123 aa6.08□□□□□ -1.44
CLSTN3-206ENST00000535668 NAA38Q9BRA0 125 aaKnown RBP6.08□□□□□ -1.44
CLSTN3-206ENST00000535668 TCL1BO95988 128 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 TRACP01848 142 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 S100A7L2Q5SY68 101 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 PPDPFLQ8WWR9 84 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 DHRS4-AS1Q9P1J3 65 aa6.07□□□□□ -1.44
CLSTN3-206ENST00000535668 A0A1B0GX51 115 aa6.06□□□□□ -1.44
CLSTN3-206ENST00000535668 EIF4EBP3O60516 100 aaPredicted RBP6.06□□□□□ -1.44
CLSTN3-206ENST00000535668 SNCGO76070 127 aa6.06□□□□□ -1.44
CLSTN3-206ENST00000535668 LST1O00453 97 aa6.05□□□□□ -1.44
CLSTN3-206ENST00000535668 ANKRD29Q8N6D5 301 aa6.05□□□□□ -1.44
CLSTN3-206ENST00000535668 ST20-AS1Q8NBB2 130 aa6.05□□□□□ -1.44
CLSTN3-206ENST00000535668 VPS25Q9BRG1 176 aa6.05□□□□□ -1.44
CLSTN3-206ENST00000535668 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 H3BQ85 93 aa6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 TRIAP1O43715 76 aa6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 ETDBQ3ZM63 59 aa6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 PCOTHQ58A44 107 aa6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
CLSTN3-206ENST00000535668 TRBV7-6A0A0J9YX20 115 aa6.03□□□□□ -1.44
CLSTN3-206ENST00000535668 IGLV8-61A0A075B6I0 122 aa6.02□□□□□ -1.45
CLSTN3-206ENST00000535668 GHRHP01286 108 aa6.02□□□□□ -1.45
CLSTN3-206ENST00000535668 SCGB1A1P11684 91 aa6.02□□□□□ -1.45
CLSTN3-206ENST00000535668 ELOF1P60002 83 aaKnown RBP6.02□□□□□ -1.45
CLSTN3-206ENST00000535668 LAMTOR3Q9UHA4 124 aa6.02□□□□□ -1.45
CLSTN3-206ENST00000535668 C9JAW5 83 aa6.01□□□□□ -1.45
CLSTN3-206ENST00000535668 FAM240AA0A1B0GVK7 77 aa6□□□□□ -1.45
CLSTN3-206ENST00000535668 H7C2G1 150 aa6□□□□□ -1.45
CLSTN3-206ENST00000535668 ACYP1P07311 99 aa6□□□□□ -1.45
CLSTN3-206ENST00000535668 SMCPP49901 116 aaPredicted RBP6□□□□□ -1.45
CLSTN3-206ENST00000535668 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
CLSTN3-206ENST00000535668 IGLV5-48A0A075B6I7 105 aa5.99□□□□□ -1.45
CLSTN3-206ENST00000535668 SMIM29Q86T20 159 aa5.99□□□□□ -1.45
CLSTN3-206ENST00000535668 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
CLSTN3-206ENST00000535668 TEX49A0A1B0GTD5 131 aa5.98□□□□□ -1.45
CLSTN3-206ENST00000535668 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
CLSTN3-206ENST00000535668 C1orf195Q5TG92 126 aa5.98□□□□□ -1.45
CLSTN3-206ENST00000535668 DNAL4O96015 105 aa5.97□□□□□ -1.45
CLSTN3-206ENST00000535668 NPC2P61916 151 aa5.97□□□□□ -1.45
CLSTN3-206ENST00000535668 COX7BP24311 80 aa5.95□□□□□ -1.46
CLSTN3-206ENST00000535668 C9orf92A6NGG3 77 aa5.94□□□□□ -1.46
CLSTN3-206ENST00000535668 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
CLSTN3-206ENST00000535668 SMIM11BQ8TCY0 68 aa5.94□□□□□ -1.46
CLSTN3-206ENST00000535668 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
CLSTN3-206ENST00000535668 MTURNQ8N3F0 131 aa5.93□□□□□ -1.46
CLSTN3-206ENST00000535668 OR13C6PQ8NH95 151 aa5.93□□□□□ -1.46
CLSTN3-206ENST00000535668 JMJD7-PLA2G4BH0Y9G9 81 aa5.92□□□□□ -1.46
CLSTN3-206ENST00000535668 TMEM256-PLSCR3K7ERE1 68 aa5.92□□□□□ -1.46
CLSTN3-206ENST00000535668 CLEC2BQ92478 149 aa5.92□□□□□ -1.46
CLSTN3-206ENST00000535668 HRCT1Q6UXD1 115 aa5.91□□□□□ -1.46
CLSTN3-206ENST00000535668 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
CLSTN3-206ENST00000535668 PDE6GP18545 87 aa5.89□□□□□ -1.47
CLSTN3-206ENST00000535668 PCP4P48539 62 aa5.89□□□□□ -1.47
CLSTN3-206ENST00000535668 Q6Q795 121 aa5.89□□□□□ -1.47
CLSTN3-206ENST00000535668 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
CLSTN3-206ENST00000535668 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
CLSTN3-206ENST00000535668 M0R2T5 61 aa5.86□□□□□ -1.47
CLSTN3-206ENST00000535668 LINC00575Q6W349 94 aa5.86□□□□□ -1.47
CLSTN3-206ENST00000535668 Q75L30 129 aa5.86□□□□□ -1.47
CLSTN3-206ENST00000535668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
CLSTN3-206ENST00000535668 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
CLSTN3-206ENST00000535668 DEFB105AQ8NG35 78 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms