RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 COX19Q49B96 90 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 Q6ZVQ6 151 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 SMCO4Q9NRQ5 59 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 V9GYY9 64 aa3.95□□□□□ -1.78
CLIP1-206ENST00000535290 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 A6NN06 94 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 PMCHL1Q16048 86 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 Q6ZVH6 145 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 MIEN1Q9BRT3 115 aa3.94□□□□□ -1.78
CLIP1-206ENST00000535290 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
CLIP1-206ENST00000535290 RPS10P5Q9NQ39 176 aa3.93□□□□□ -1.78
CLIP1-206ENST00000535290 MT-ND4LP03901 98 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 IGKV2-30P06310 120 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 TSPEAR-AS2P59090 65 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
CLIP1-206ENST00000535290 NPC2P61916 151 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
CLIP1-206ENST00000535290 IGLV5-48A0A075B6I7 105 aa3.91□□□□□ -1.78
CLIP1-206ENST00000535290 A8MWP4 228 aa3.91□□□□□ -1.78
CLIP1-206ENST00000535290 COX7BP24311 80 aa3.91□□□□□ -1.78
CLIP1-206ENST00000535290 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
CLIP1-206ENST00000535290 COMMD7Q86VX2 200 aa3.91□□□□□ -1.78
CLIP1-206ENST00000535290 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
CLIP1-206ENST00000535290 RHEBQ15382 184 aa3.89□□□□□ -1.79
CLIP1-206ENST00000535290 ADAMTSL4-AS1Q5T5F5 129 aa3.89□□□□□ -1.79
CLIP1-206ENST00000535290 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
CLIP1-206ENST00000535290 LINC00614P0C842 121 aa3.88□□□□□ -1.79
CLIP1-206ENST00000535290 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
CLIP1-206ENST00000535290 TRAV12-1A0A0B4J245 112 aa3.87□□□□□ -1.79
CLIP1-206ENST00000535290 SNAPINO95295 136 aa3.87□□□□□ -1.79
CLIP1-206ENST00000535290 S100A1P23297 94 aa3.86□□□□□ -1.79
CLIP1-206ENST00000535290 IFITM2Q01629 132 aa3.86□□□□□ -1.79
CLIP1-206ENST00000535290 FABP9Q0Z7S8 132 aa3.86□□□□□ -1.79
CLIP1-206ENST00000535290 LEPROTO15243 131 aa3.85□□□□□ -1.79
CLIP1-206ENST00000535290 SPRR2EP22531 72 aa3.85□□□□□ -1.79
CLIP1-206ENST00000535290 SPRR2BP35325 72 aa3.85□□□□□ -1.79
CLIP1-206ENST00000535290 SPRR2AP35326 72 aa3.85□□□□□ -1.79
CLIP1-206ENST00000535290 J3QQQ9 107 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 LST1O00453 97 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 DSCR10P59022 87 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 MTURNQ8N3F0 131 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 C18orf32Q8TCD1 76 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 IFI27L1Q96BM0 104 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 SPANXDQ9BXN6 97 aa3.84□□□□□ -1.79
CLIP1-206ENST00000535290 MT1BP07438 61 aa3.83□□□□□ -1.8
CLIP1-206ENST00000535290 SEC11CQ9BY50 192 aa3.83□□□□□ -1.8
CLIP1-206ENST00000535290 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
CLIP1-206ENST00000535290 A0A1B0GV72 72 aa3.82□□□□□ -1.8
CLIP1-206ENST00000535290 F8WEM9 126 aa3.82□□□□□ -1.8
CLIP1-206ENST00000535290 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
CLIP1-206ENST00000535290 CLEC2BQ92478 149 aa3.82□□□□□ -1.8
CLIP1-206ENST00000535290 TRBV7-6A0A0J9YX20 115 aa3.81□□□□□ -1.8
CLIP1-206ENST00000535290 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
CLIP1-206ENST00000535290 NMUP48645 174 aa3.81□□□□□ -1.8
CLIP1-206ENST00000535290 Q6JHZ5 121 aa3.81□□□□□ -1.8
CLIP1-206ENST00000535290 LINC00308Q8TCZ7 52 aa3.81□□□□□ -1.8
CLIP1-206ENST00000535290 A0A1B0GWB2 263 aa3.8□□□□□ -1.8
CLIP1-206ENST00000535290 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
CLIP1-206ENST00000535290 LITAFQ99732 161 aa3.79□□□□□ -1.8
CLIP1-206ENST00000535290 NDUFA5Q16718 116 aa3.77□□□□□ -1.81
CLIP1-206ENST00000535290 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
CLIP1-206ENST00000535290 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
CLIP1-206ENST00000535290 S100PP25815 95 aa3.76□□□□□ -1.81
CLIP1-206ENST00000535290 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
CLIP1-206ENST00000535290 ZNF815PA8K554 130 aa3.75□□□□□ -1.81
CLIP1-206ENST00000535290 HERVK_113P61574 105 aa3.75□□□□□ -1.81
CLIP1-206ENST00000535290 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
CLIP1-206ENST00000535290 Q5VV11 94 aa3.75□□□□□ -1.81
CLIP1-206ENST00000535290 COLCA2A8K830 154 aa3.74□□□□□ -1.81
CLIP1-206ENST00000535290 SPINK7P58062 85 aa3.74□□□□□ -1.81
CLIP1-206ENST00000535290 LINC00313P59037 77 aa3.74□□□□□ -1.81
CLIP1-206ENST00000535290 PMCHL2Q9BQD1 86 aa3.74□□□□□ -1.81
CLIP1-206ENST00000535290 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
CLIP1-206ENST00000535290 TRAPPC1Q9Y5R8 145 aa3.74□□□□□ -1.81
CLIP1-206ENST00000535290 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 TSTD3H0UI37 97 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 H3BUT2 72 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 SERF1AO75920 110 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 PLNP26678 52 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 SS18L2Q9UHA2 77 aa3.73□□□□□ -1.81
CLIP1-206ENST00000535290 A6NDN8 102 aa3.72□□□□□ -1.81
CLIP1-206ENST00000535290 DPM2O94777 84 aa3.72□□□□□ -1.81
CLIP1-206ENST00000535290 SPRR2DP22532 72 aa3.72□□□□□ -1.81
CLIP1-206ENST00000535290 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
CLIP1-206ENST00000535290 Q6ZQY7 126 aa3.72□□□□□ -1.81
CLIP1-206ENST00000535290 CHCHD1Q96BP2 118 aaKnown RBP3.72□□□□□ -1.81
CLIP1-206ENST00000535290 TIMM17BO60830 172 aa3.71□□□□□ -1.82
CLIP1-206ENST00000535290 NDUFV3P56181 108 aaKnown RBP3.71□□□□□ -1.82
CLIP1-206ENST00000535290 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
CLIP1-206ENST00000535290 A0A087WSZ3 146 aa3.7□□□□□ -1.82
CLIP1-206ENST00000535290 E9PLD3 99 aa3.7□□□□□ -1.82
CLIP1-206ENST00000535290 WFDC13Q8IUB5 93 aa3.7□□□□□ -1.82
CLIP1-206ENST00000535290 OCR1Q9BZK8 76 aa3.7□□□□□ -1.82
CLIP1-206ENST00000535290 IGKCP01834 107 aa3.69□□□□□ -1.82
CLIP1-206ENST00000535290 SCGB1A1P11684 91 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms