RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 A0A096LNI7 61 aa5.39□□□□□ -1.55
SFSWAP-202ENST00000535202 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
SFSWAP-202ENST00000535202 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
SFSWAP-202ENST00000535202 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
SFSWAP-202ENST00000535202 TRAV23DV6A0A075B6W5 121 aa5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 SMIM1B2RUZ4 78 aa5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 RBM3P98179 157 aaKnown RBP5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
SFSWAP-202ENST00000535202 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
SFSWAP-202ENST00000535202 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
SFSWAP-202ENST00000535202 SMIM11BQ8TCY0 68 aa5.37□□□□□ -1.55
SFSWAP-202ENST00000535202 F8WEM9 126 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 CD164Q04900 197 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 MIR7-3HGQ8N6C7 128 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 LINC00337Q8N6G1 96 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 LINC00474Q9P2X8 69 aa5.36□□□□□ -1.55
SFSWAP-202ENST00000535202 IGKV2-28A0A075B6P5 120 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 TRBV7-4A0A0J9YYF1 115 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 NCR3O14931 201 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 IGKV2D-28P01615 120 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 PRR3P79522 188 aaKnown RBP5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 CAMK2N2Q96S95 79 aa5.35□□□□□ -1.55
SFSWAP-202ENST00000535202 SPAG11BQ08648 103 aa5.34□□□□□ -1.55
SFSWAP-202ENST00000535202 C9orf129Q5T035 196 aaKnown RBP5.34□□□□□ -1.55
SFSWAP-202ENST00000535202 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.55
SFSWAP-202ENST00000535202 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.55
SFSWAP-202ENST00000535202 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
SFSWAP-202ENST00000535202 Q1T7F1 81 aa5.32□□□□□ -1.56
SFSWAP-202ENST00000535202 A0A1W2PNN7 141 aa5.31□□□□□ -1.56
SFSWAP-202ENST00000535202 LINC01547P58512 204 aaPredicted RBP5.31□□□□□ -1.56
SFSWAP-202ENST00000535202 Q6ZQT0 140 aa5.31□□□□□ -1.56
SFSWAP-202ENST00000535202 Q6ZRP5 223 aa5.31□□□□□ -1.56
SFSWAP-202ENST00000535202 COX7B2Q8TF08 81 aa5.31□□□□□ -1.56
SFSWAP-202ENST00000535202 TNXBP22105 4242 aa5.3□□□□□ -1.56
SFSWAP-202ENST00000535202 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
SFSWAP-202ENST00000535202 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
SFSWAP-202ENST00000535202 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
SFSWAP-202ENST00000535202 TMEM254Q8TBM7 123 aa5.3□□□□□ -1.56
SFSWAP-202ENST00000535202 SPINK6Q6UWN8 80 aa5.29□□□□□ -1.56
SFSWAP-202ENST00000535202 NREPQ16612 68 aa5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 UNQ6190/PRO20217Q6UXQ8 127 aa5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 Q6ZVQ6 151 aa5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 PHF5AQ7RTV0 110 aaKnown RBP5.28□□□□□ -1.56
SFSWAP-202ENST00000535202 A0A087WZ39 114 aa5.27□□□□□ -1.57
SFSWAP-202ENST00000535202 PRYO14603 147 aa5.27□□□□□ -1.57
SFSWAP-202ENST00000535202 LINC00158P58513 81 aa5.27□□□□□ -1.57
SFSWAP-202ENST00000535202 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
SFSWAP-202ENST00000535202 SNURFQ9Y675 71 aa5.27□□□□□ -1.57
SFSWAP-202ENST00000535202 FAM168BA1KXE4 195 aa5.26□□□□□ -1.57
SFSWAP-202ENST00000535202 TLX1NBP0CAT3 122 aa5.26□□□□□ -1.57
SFSWAP-202ENST00000535202 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
SFSWAP-202ENST00000535202 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
SFSWAP-202ENST00000535202 A0A0U1RRA0 63 aa5.25□□□□□ -1.57
SFSWAP-202ENST00000535202 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
SFSWAP-202ENST00000535202 KIAA0087Q14695 138 aa5.25□□□□□ -1.57
SFSWAP-202ENST00000535202 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
SFSWAP-202ENST00000535202 COX17Q14061 63 aa5.24□□□□□ -1.57
SFSWAP-202ENST00000535202 LINC00575Q6W349 94 aa5.24□□□□□ -1.57
SFSWAP-202ENST00000535202 TOMM7Q9P0U1 55 aa5.24□□□□□ -1.57
SFSWAP-202ENST00000535202 BPY2O14599 106 aa5.23□□□□□ -1.57
SFSWAP-202ENST00000535202 OCR1Q9BZK8 76 aa5.23□□□□□ -1.57
SFSWAP-202ENST00000535202 A0A1B0GW54 56 aa5.22□□□□□ -1.57
SFSWAP-202ENST00000535202 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
SFSWAP-202ENST00000535202 UBE2BP63146 152 aa5.22□□□□□ -1.57
SFSWAP-202ENST00000535202 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
SFSWAP-202ENST00000535202 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
SFSWAP-202ENST00000535202 IGLV7-43P04211 117 aa5.21□□□□□ -1.58
SFSWAP-202ENST00000535202 FAM229BQ4G0N7 80 aa5.21□□□□□ -1.58
SFSWAP-202ENST00000535202 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
SFSWAP-202ENST00000535202 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
SFSWAP-202ENST00000535202 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.58
SFSWAP-202ENST00000535202 NDUFS5O43920 106 aa5.2□□□□□ -1.58
SFSWAP-202ENST00000535202 Q8IZM0 81 aa5.2□□□□□ -1.58
SFSWAP-202ENST00000535202 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
SFSWAP-202ENST00000535202 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.19□□□□□ -1.58
SFSWAP-202ENST00000535202 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
SFSWAP-202ENST00000535202 H0Y9J4 135 aa5.18□□□□□ -1.58
SFSWAP-202ENST00000535202 XAGE1AQ9HD64 81 aa5.18□□□□□ -1.58
SFSWAP-202ENST00000535202 PRR26Q8N8Z3 221 aa5.17□□□□□ -1.58
SFSWAP-202ENST00000535202 NDUFB1O75438 58 aa5.16□□□□□ -1.58
SFSWAP-202ENST00000535202 COX7BP24311 80 aa5.16□□□□□ -1.58
SFSWAP-202ENST00000535202 ELOF1P60002 83 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-202ENST00000535202 ZCCHC13Q8WW36 166 aaKnown RBP5.16□□□□□ -1.58
SFSWAP-202ENST00000535202 IGKV4-1P06312 121 aa5.15□□□□□ -1.59
SFSWAP-202ENST00000535202 UBE2AP49459 152 aa5.15□□□□□ -1.59
SFSWAP-202ENST00000535202 LRP2P98164 4655 aa5.15□□□□□ -1.59
SFSWAP-202ENST00000535202 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
SFSWAP-202ENST00000535202 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
SFSWAP-202ENST00000535202 C6orf99Q4VX62 202 aa5.14□□□□□ -1.59
SFSWAP-202ENST00000535202 ATP11AUNQ6ZP68 121 aa5.14□□□□□ -1.59
SFSWAP-202ENST00000535202 LIMD2Q9BT23 127 aa5.14□□□□□ -1.59
SFSWAP-202ENST00000535202 IGLV1-50A0A075B6I6 118 aa5.13□□□□□ -1.59
SFSWAP-202ENST00000535202 IGLV6-57P01721 117 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms