RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PFDN5Q99471 154 aa-2.04□□□□□ -2.74
COPB1-212ENST00000534771 LRRC9Q6ZRR7 1453 aa-2.05□□□□□ -2.74
COPB1-212ENST00000534771 GNG14A0A1W2PPG7 69 aa-2.05□□□□□ -2.74
COPB1-212ENST00000534771 APOC2P02655 101 aa-2.05□□□□□ -2.74
COPB1-212ENST00000534771 SPART-AS1P0CW21 52 aa-2.05□□□□□ -2.74
COPB1-212ENST00000534771 DR1Q01658 176 aa-2.05□□□□□ -2.74
COPB1-212ENST00000534771 FAM135AQ9P2D6 1515 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 SCAPERQ9BY12 1400 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 F8WEM9 126 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 DEFB130BP0DP73 79 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 DEFB130AP0DP74 79 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 ATP5EP56381 51 aaPredicted RBP-2.06□□□□□ -2.74
COPB1-212ENST00000534771 KIF21BO75037 1637 aa-2.06□□□□□ -2.74
COPB1-212ENST00000534771 CRYBG1Q9Y4K1 1723 aa-2.07□□□□□ -2.74
COPB1-212ENST00000534771 NAP1L6A6NFF2 107 aa-2.07□□□□□ -2.74
COPB1-212ENST00000534771 C3orf79P0CE67 100 aa-2.07□□□□□ -2.74
COPB1-212ENST00000534771 RPL38P63173 70 aaKnown RBP-2.07□□□□□ -2.74
COPB1-212ENST00000534771 TTTY10Q9BZA0 68 aa-2.07□□□□□ -2.74
COPB1-212ENST00000534771 GOLGB1Q14789 3259 aaKnown RBP-2.08□□□□□ -2.74
COPB1-212ENST00000534771 A0A1B0GUL6 1792 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 LINC00158P58513 81 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 ARPC4P59998 168 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 MEIG1Q5JSS6 88 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 C1orf54Q8WWF1 131 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 MAGI3Q5TCQ9 1506 aa-2.08□□□□□ -2.74
COPB1-212ENST00000534771 PARP4Q9UKK3 1724 aaKnown RBP-2.08□□□□□ -2.74
COPB1-212ENST00000534771 CROCC2H7BZ55 1655 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 TMEM131LA2VDJ0 1609 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 UBR3Q6ZT12 1888 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 CRYM-AS1A6NIL9 109 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 TMEM262E9PQX1 116 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 COX7BP24311 80 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 LZICQ8WZA0 190 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 ANP32BQ92688 251 aaKnown RBP-2.09□□□□□ -2.74
COPB1-212ENST00000534771 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.09□□□□□ -2.74
COPB1-212ENST00000534771 WIZO95785 1651 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 DEPDC5O75140 1603 aa-2.09□□□□□ -2.74
COPB1-212ENST00000534771 OOSP1A8MZH6 123 aa-2.1□□□□□ -2.75
COPB1-212ENST00000534771 KTN1Q86UP2 1357 aaKnown RBP-2.1□□□□□ -2.75
COPB1-212ENST00000534771 PLCH1Q4KWH8 1693 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 CGREF1Q99674 301 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 DPH3P1Q9H4G8 78 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 NRXN3Q9Y4C0 1643 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 NAIPQ13075 1403 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 EEA1Q15075 1411 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 CHD1O14646 1710 aa-2.11□□□□□ -2.75
COPB1-212ENST00000534771 FAM25AB3EWG3 89 aa-2.12□□□□□ -2.75
COPB1-212ENST00000534771 FAM25CB3EWG5 89 aa-2.12□□□□□ -2.75
COPB1-212ENST00000534771 FAM25GB3EWG6 89 aa-2.12□□□□□ -2.75
COPB1-212ENST00000534771 IGLC2P0DOY2 106 aa-2.12□□□□□ -2.75
COPB1-212ENST00000534771 IGLC3P0DOY3 106 aa-2.12□□□□□ -2.75
COPB1-212ENST00000534771 NESP48681 1621 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 ERVK-7P63135 1459 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 C20orf202A1L168 122 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 FAM24AA6NFZ4 105 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 FOCADQ5VW36 1801 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 ZC3H13Q5T200 1668 aaKnown RBP-2.13□□□□□ -2.75
COPB1-212ENST00000534771 ABCC2Q92887 1545 aa-2.13□□□□□ -2.75
COPB1-212ENST00000534771 LYNX1G3V0Z9 82 aa-2.14□□□□□ -2.75
COPB1-212ENST00000534771 IAPPP10997 89 aa-2.14□□□□□ -2.75
COPB1-212ENST00000534771 SERP2Q8N6R1 65 aa-2.14□□□□□ -2.75
COPB1-212ENST00000534771 LRRC7Q96NW7 1537 aa-2.14□□□□□ -2.75
COPB1-212ENST00000534771 EIF4G3O43432 1585 aaKnown RBP-2.15□□□□□ -2.75
COPB1-212ENST00000534771 ARHGAP5Q13017 1502 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 ZFYVE16Q7Z3T8 1539 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 TRBV25-1A0A075B6N4 114 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 PMCHL1Q16048 86 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.15□□□□□ -2.75
COPB1-212ENST00000534771 SPHKAPQ2M3C7 1700 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 MLH3Q9UHC1 1453 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 ITSN2Q9NZM3 1697 aa-2.15□□□□□ -2.75
COPB1-212ENST00000534771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.16□□□□□ -2.754e-7■■■■□ 24.7
COPB1-212ENST00000534771 TMEM218A2RU14 115 aa-2.16□□□□□ -2.76
COPB1-212ENST00000534771 M0QY20 66 aa-2.16□□□□□ -2.76
COPB1-212ENST00000534771 KRTDAPP60985 99 aa-2.16□□□□□ -2.76
COPB1-212ENST00000534771 TEX14Q8IWB6 1497 aa-2.16□□□□□ -2.76
COPB1-212ENST00000534771 CC2D2AQ9P2K1 1620 aa-2.17□□□□□ -2.76
COPB1-212ENST00000534771 SUPT6HQ7KZ85 1726 aaKnown RBP-2.17□□□□□ -2.76
COPB1-212ENST00000534771 THOC2Q8NI27 1593 aaKnown RBP-2.17□□□□□ -2.76
COPB1-212ENST00000534771 MED14O60244 1454 aa-2.17□□□□□ -2.76
COPB1-212ENST00000534771 NCOA2Q15596 1464 aa-2.17□□□□□ -2.76
COPB1-212ENST00000534771 CACFD1Q9UGQ2 172 aa-2.17□□□□□ -2.76
COPB1-212ENST00000534771 NWD1Q149M9 1564 aa-2.18□□□□□ -2.76
COPB1-212ENST00000534771 WT1-ASQ06250 92 aa-2.18□□□□□ -2.76
COPB1-212ENST00000534771 PYDC1Q8WXC3 89 aa-2.18□□□□□ -2.76
COPB1-212ENST00000534771 LINC00470Q9BZP3 86 aa-2.18□□□□□ -2.76
COPB1-212ENST00000534771 NOP10Q9NPE3 64 aaKnown RBP-2.18□□□□□ -2.76
COPB1-212ENST00000534771 DOT1LQ8TEK3 1739 aa-2.18□□□□□ -2.76
COPB1-212ENST00000534771 RAPGEF2Q9Y4G8 1499 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 GNG7O60262 68 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 UQCRHP07919 91 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 IFI6P09912 130 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 SELENOWP63302 87 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 TRGV9Q99603 122 aa-2.19□□□□□ -2.76
COPB1-212ENST00000534771 ANKRD36BQ8N2N9 1353 aa-2.2□□□□□ -2.76
COPB1-212ENST00000534771 D6R8Y8 96 aa-2.2□□□□□ -2.76
COPB1-212ENST00000534771 MUSTN1Q8IVN3 82 aa-2.2□□□□□ -2.76
COPB1-212ENST00000534771 PAIP2BQ9ULR5 123 aaKnown RBP-2.2□□□□□ -2.76
COPB1-212ENST00000534771 PLIN4Q96Q06 1357 aa-2.21□□□□□ -2.76
COPB1-212ENST00000534771 KIF1AQ12756 1690 aa-2.21□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms