RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 Q5XG85 94 aa3.94□□□□□ -1.78
CMTM1-220ENST00000534143 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
CMTM1-220ENST00000534143 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
CMTM1-220ENST00000534143 SND1-IT1Q9HBX3 110 aa3.94□□□□□ -1.78
CMTM1-220ENST00000534143 A0A0U1RRA0 63 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 PDE6GP18545 87 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 LINC00158P58513 81 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 SOSTDC1Q6X4U4 206 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 LINC00336Q6ZUF6 198 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 MIR7-3HGQ8N6C7 128 aa3.93□□□□□ -1.78
CMTM1-220ENST00000534143 TRAV23DV6A0A075B6W5 121 aa3.92□□□□□ -1.78
CMTM1-220ENST00000534143 PRYO14603 147 aa3.92□□□□□ -1.78
CMTM1-220ENST00000534143 Q6ZRP5 223 aa3.92□□□□□ -1.78
CMTM1-220ENST00000534143 OBSCN-AS1Q96MR7 158 aa3.92□□□□□ -1.78
CMTM1-220ENST00000534143 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
CMTM1-220ENST00000534143 HSPG2P98160 4391 aa3.91□□□□□ -1.78
CMTM1-220ENST00000534143 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
CMTM1-220ENST00000534143 SEC61GP60059 68 aa3.91□□□□□ -1.78
CMTM1-220ENST00000534143 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
CMTM1-220ENST00000534143 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
CMTM1-220ENST00000534143 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
CMTM1-220ENST00000534143 LRP1BQ9NZR2 4599 aa3.9□□□□□ -1.78
CMTM1-220ENST00000534143 RYR1P21817 5038 aa3.9□□□□□ -1.78
CMTM1-220ENST00000534143 DNAH5Q8TE73 4624 aa3.9□□□□□ -1.78
CMTM1-220ENST00000534143 A0A087WVE0 104 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 A0A096LNI7 61 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 A0A1B0GVY2 172 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
CMTM1-220ENST00000534143 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 XAGE1AQ9HD64 81 aa3.9□□□□□ -1.79
CMTM1-220ENST00000534143 IGKV2D-30A0A075B6S6 120 aa3.89□□□□□ -1.79
CMTM1-220ENST00000534143 C16orf90A8MZG2 172 aa3.89□□□□□ -1.79
CMTM1-220ENST00000534143 NCR3O14931 201 aa3.89□□□□□ -1.79
CMTM1-220ENST00000534143 Q8NDZ9 215 aa3.89□□□□□ -1.79
CMTM1-220ENST00000534143 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
CMTM1-220ENST00000534143 APOBP04114 4563 aaKnown RBP3.88□□□□□ -1.79
CMTM1-220ENST00000534143 A0A087WYN8 130 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 TRBV7-6A0A0J9YX20 115 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 EPM2AB3EWF7 344 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 F8WEM9 126 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 PANO1I0J062 215 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 VPREB1P12018 145 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 CXCL6P80162 114 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
CMTM1-220ENST00000534143 IGLV5-37A0A075B6J1 123 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 A0A1W2PNN7 141 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 H7BZZ5 65 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 OXTP01178 125 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 KRTAP10-1P60331 282 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 PRR3P79522 188 aaKnown RBP3.87□□□□□ -1.79
CMTM1-220ENST00000534143 HAMPP81172 84 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 SERTAD4-AS1Q5TG53 156 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
CMTM1-220ENST00000534143 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 FAM168BA1KXE4 195 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 LINC00337Q8N6G1 96 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 SPACA4Q8TDM5 124 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 LINC00167Q96N53 147 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 LINC00474Q9P2X8 69 aa3.86□□□□□ -1.79
CMTM1-220ENST00000534143 LOC110117498A0A087WWA1 95 aa3.85□□□□□ -1.79
CMTM1-220ENST00000534143 M0R378 163 aa3.85□□□□□ -1.79
CMTM1-220ENST00000534143 Q6ZSA8 131 aa3.85□□□□□ -1.79
CMTM1-220ENST00000534143 CYSTM1Q9H1C7 97 aa3.85□□□□□ -1.79
CMTM1-220ENST00000534143 C22orf24Q9Y442 160 aa3.85□□□□□ -1.79
CMTM1-220ENST00000534143 FAM19A1Q7Z5A9 133 aa3.84□□□□□ -1.79
CMTM1-220ENST00000534143 PLAC8Q9NZF1 115 aa3.84□□□□□ -1.79
CMTM1-220ENST00000534143 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 IGLV6-57P01721 117 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
CMTM1-220ENST00000534143 NREPQ16612 68 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 C7orf33Q8WU49 177 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
CMTM1-220ENST00000534143 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
CMTM1-220ENST00000534143 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
CMTM1-220ENST00000534143 Q6ZVQ6 151 aa3.82□□□□□ -1.8
CMTM1-220ENST00000534143 PHF5AQ7RTV0 110 aaKnown RBP3.82□□□□□ -1.8
CMTM1-220ENST00000534143 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
CMTM1-220ENST00000534143 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
CMTM1-220ENST00000534143 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
CMTM1-220ENST00000534143 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
CMTM1-220ENST00000534143 Q6ZQT0 140 aa3.81□□□□□ -1.8
CMTM1-220ENST00000534143 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
CMTM1-220ENST00000534143 CIRBP-AS1Q8TBR5 109 aa3.81□□□□□ -1.8
CMTM1-220ENST00000534143 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
CMTM1-220ENST00000534143 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
CMTM1-220ENST00000534143 BPY2O14599 106 aa3.8□□□□□ -1.8
CMTM1-220ENST00000534143 SPRR1AP35321 89 aa3.8□□□□□ -1.8
CMTM1-220ENST00000534143 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
CMTM1-220ENST00000534143 SCXQ7RTU7 201 aa3.8□□□□□ -1.8
CMTM1-220ENST00000534143 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
CMTM1-220ENST00000534143 FAT1Q14517 4588 aa3.79□□□□□ -1.8
CMTM1-220ENST00000534143 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
CMTM1-220ENST00000534143 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms