RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SOSTDC1Q6X4U4 206 aa4.68□□□□□ -1.66
CSDE1-215ENST00000533818 C9JQL5 133 aa4.67□□□□□ -1.66
CSDE1-215ENST00000533818 Q6JHZ5 121 aa4.67□□□□□ -1.66
CSDE1-215ENST00000533818 CLEC2BQ92478 149 aa4.67□□□□□ -1.66
CSDE1-215ENST00000533818 A0A096LNJ9 63 aa4.65□□□□□ -1.67
CSDE1-215ENST00000533818 A0A1B0GWB2 263 aa4.65□□□□□ -1.67
CSDE1-215ENST00000533818 SPINK7P58062 85 aa4.65□□□□□ -1.67
CSDE1-215ENST00000533818 IFITM2Q01629 132 aa4.65□□□□□ -1.67
CSDE1-215ENST00000533818 RPS10P5Q9NQ39 176 aa4.65□□□□□ -1.67
CSDE1-215ENST00000533818 ZNF815PA8K554 130 aa4.63□□□□□ -1.67
CSDE1-215ENST00000533818 LINC00313P59037 77 aa4.63□□□□□ -1.67
CSDE1-215ENST00000533818 SPRR2GQ9BYE4 73 aa4.63□□□□□ -1.67
CSDE1-215ENST00000533818 TSPEAR-AS2P59090 65 aa4.62□□□□□ -1.67
CSDE1-215ENST00000533818 TRBV7-6A0A0J9YX20 115 aa4.61□□□□□ -1.67
CSDE1-215ENST00000533818 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
CSDE1-215ENST00000533818 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
CSDE1-215ENST00000533818 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
CSDE1-215ENST00000533818 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 COLCA2A8K830 154 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 PMCHL1Q16048 86 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 ADAMTSL4-AS1Q5T5F5 129 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 SS18L2Q9UHA2 77 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
CSDE1-215ENST00000533818 NMUP48645 174 aa4.59□□□□□ -1.67
CSDE1-215ENST00000533818 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
CSDE1-215ENST00000533818 KRTAP5-10Q6L8G5 202 aa4.59□□□□□ -1.67
CSDE1-215ENST00000533818 LINC00518Q8N0U6 118 aa4.59□□□□□ -1.67
CSDE1-215ENST00000533818 SPANXCQ9NY87 97 aa4.59□□□□□ -1.67
CSDE1-215ENST00000533818 TRAV13-2A0A0B4J235 113 aa4.58□□□□□ -1.68
CSDE1-215ENST00000533818 PEA15Q15121 130 aa4.58□□□□□ -1.68
CSDE1-215ENST00000533818 OCIAD2Q56VL3 154 aa4.58□□□□□ -1.68
CSDE1-215ENST00000533818 LEPROTO15243 131 aa4.57□□□□□ -1.68
CSDE1-215ENST00000533818 TRAV12-1A0A0B4J245 112 aa4.56□□□□□ -1.68
CSDE1-215ENST00000533818 A0A0J9YXY3 114 aa4.56□□□□□ -1.68
CSDE1-215ENST00000533818 MT-ND4LP03901 98 aa4.56□□□□□ -1.68
CSDE1-215ENST00000533818 H1FX-AS1Q4G0G2 97 aa4.56□□□□□ -1.68
CSDE1-215ENST00000533818 SLC7A5P1Q8MH63 180 aa4.56□□□□□ -1.68
CSDE1-215ENST00000533818 J3QQQ9 107 aa4.55□□□□□ -1.68
CSDE1-215ENST00000533818 RGS21Q2M5E4 152 aa4.55□□□□□ -1.68
CSDE1-215ENST00000533818 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
CSDE1-215ENST00000533818 NHP2Q9NX24 153 aaKnown RBP4.55□□□□□ -1.68
CSDE1-215ENST00000533818 LINC00614P0C842 121 aa4.54□□□□□ -1.68
CSDE1-215ENST00000533818 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
CSDE1-215ENST00000533818 LINC00308Q8TCZ7 52 aa4.53□□□□□ -1.68
CSDE1-215ENST00000533818 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
CSDE1-215ENST00000533818 A4D1N5 150 aa4.52□□□□□ -1.69
CSDE1-215ENST00000533818 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
CSDE1-215ENST00000533818 ZCCHC13Q8WW36 166 aaKnown RBP4.52□□□□□ -1.69
CSDE1-215ENST00000533818 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
CSDE1-215ENST00000533818 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
CSDE1-215ENST00000533818 FABP9Q0Z7S8 132 aa4.49□□□□□ -1.69
CSDE1-215ENST00000533818 A0A087WSZ3 146 aa4.48□□□□□ -1.69
CSDE1-215ENST00000533818 H3BUT2 72 aa4.48□□□□□ -1.69
CSDE1-215ENST00000533818 C21orf62-AS1Q17RA5 79 aa4.48□□□□□ -1.69
CSDE1-215ENST00000533818 TCTE3Q8IZS6 198 aa4.48□□□□□ -1.69
CSDE1-215ENST00000533818 SEC11CQ9BY50 192 aa4.47□□□□□ -1.69
CSDE1-215ENST00000533818 Q6ZQY7 126 aa4.46□□□□□ -1.7
CSDE1-215ENST00000533818 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
CSDE1-215ENST00000533818 HERVK_113P61574 105 aa4.45□□□□□ -1.7
CSDE1-215ENST00000533818 TEN1Q86WV5 123 aa4.45□□□□□ -1.7
CSDE1-215ENST00000533818 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
CSDE1-215ENST00000533818 A6NDN8 102 aa4.44□□□□□ -1.7
CSDE1-215ENST00000533818 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
CSDE1-215ENST00000533818 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CSDE1-215ENST00000533818 LITAFQ99732 161 aa4.44□□□□□ -1.7
CSDE1-215ENST00000533818 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
CSDE1-215ENST00000533818 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
CSDE1-215ENST00000533818 H0Y8G0 127 aa4.43□□□□□ -1.7
CSDE1-215ENST00000533818 SERF1AO75920 110 aa4.43□□□□□ -1.7
CSDE1-215ENST00000533818 SNHG12Q9BXW3 62 aa4.43□□□□□ -1.7
CSDE1-215ENST00000533818 C9orf118A6NHY6 69 aa4.42□□□□□ -1.7
CSDE1-215ENST00000533818 C3orf79P0CE67 100 aa4.41□□□□□ -1.7
CSDE1-215ENST00000533818 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
CSDE1-215ENST00000533818 PLNP26678 52 aa4.4□□□□□ -1.71
CSDE1-215ENST00000533818 MT4P47944 62 aa4.4□□□□□ -1.71
CSDE1-215ENST00000533818 COX19Q49B96 90 aa4.4□□□□□ -1.71
CSDE1-215ENST00000533818 C5orf47Q569G3 176 aa4.4□□□□□ -1.71
CSDE1-215ENST00000533818 LINC00575Q6W349 94 aa4.4□□□□□ -1.71
CSDE1-215ENST00000533818 hADV29S1A0JD25 119 aa4.39□□□□□ -1.71
CSDE1-215ENST00000533818 TIMM17BO60830 172 aa4.39□□□□□ -1.71
CSDE1-215ENST00000533818 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
CSDE1-215ENST00000533818 MT1XP80297 61 aa4.37□□□□□ -1.71
CSDE1-215ENST00000533818 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CSDE1-215ENST00000533818 VAMP3Q15836 100 aa4.37□□□□□ -1.71
CSDE1-215ENST00000533818 TMA7Q9Y2S6 64 aaKnown RBP4.37□□□□□ -1.71
CSDE1-215ENST00000533818 S100PP25815 95 aa4.36□□□□□ -1.71
CSDE1-215ENST00000533818 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
CSDE1-215ENST00000533818 PPDPFLQ8WWR9 84 aa4.36□□□□□ -1.71
CSDE1-215ENST00000533818 DPM2O94777 84 aa4.35□□□□□ -1.71
CSDE1-215ENST00000533818 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
CSDE1-215ENST00000533818 C8orf87E5RJ46 101 aa4.33□□□□□ -1.72
CSDE1-215ENST00000533818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-215ENST00000533818 PMCHL2Q9BQD1 86 aa4.33□□□□□ -1.72
CSDE1-215ENST00000533818 E9PLD3 99 aa4.32□□□□□ -1.72
CSDE1-215ENST00000533818 IGKCP01834 107 aa4.32□□□□□ -1.72
CSDE1-215ENST00000533818 CHCHD1Q96BP2 118 aaKnown RBP4.32□□□□□ -1.72
CSDE1-215ENST00000533818 DSCR8Q96T75 97 aa4.32□□□□□ -1.72
CSDE1-215ENST00000533818 TRAPPC1Q9Y5R8 145 aa4.32□□□□□ -1.72
CSDE1-215ENST00000533818 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms