RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 LINC01547P58512 204 aaPredicted RBP12.51□□□□□ -0.41
PTP4A2-215ENST00000533408 KRTAP10-8P60410 259 aa12.51□□□□□ -0.41
PTP4A2-215ENST00000533408 SSBP3-AS1Q7Z2R9 100 aa12.51□□□□□ -0.41
PTP4A2-215ENST00000533408 A0A087X002 238 aa12.5□□□□□ -0.41
PTP4A2-215ENST00000533408 TMEM256-PLSCR3K7ERE1 68 aa12.5□□□□□ -0.41
PTP4A2-215ENST00000533408 TCL1BO95988 128 aa12.49□□□□□ -0.41
PTP4A2-215ENST00000533408 IGLV9-49A0A0B4J1Y8 123 aa12.48□□□□□ -0.41
PTP4A2-215ENST00000533408 C9orf153Q5TBE3 101 aa12.47□□□□□ -0.41
PTP4A2-215ENST00000533408 FLG2Q5D862 2391 aaPredicted RBP12.46□□□□□ -0.41
PTP4A2-215ENST00000533408 Q8NBF4 154 aa12.46□□□□□ -0.41
PTP4A2-215ENST00000533408 KRTAP13-2Q52LG2 175 aa12.45□□□□□ -0.42
PTP4A2-215ENST00000533408 MOBPQ13875 183 aa12.44□□□□□ -0.42
PTP4A2-215ENST00000533408 C4orf48Q5BLP8 95 aa12.43□□□□□ -0.42
PTP4A2-215ENST00000533408 SPAG11AQ6PDA7 123 aa12.43□□□□□ -0.42
PTP4A2-215ENST00000533408 SMIM29Q86T20 159 aa12.43□□□□□ -0.42
PTP4A2-215ENST00000533408 C3orf22Q8N5N4 141 aa12.43□□□□□ -0.42
PTP4A2-215ENST00000533408 SPCS1Q9Y6A9 102 aa12.42□□□□□ -0.42
PTP4A2-215ENST00000533408 MT1HL1P0DM35 61 aa12.41□□□□□ -0.42
PTP4A2-215ENST00000533408 NDUFV3P56181 108 aaKnown RBP12.41□□□□□ -0.42
PTP4A2-215ENST00000533408 BAALC-AS2P0C853 105 aa12.4□□□□□ -0.42
PTP4A2-215ENST00000533408 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
PTP4A2-215ENST00000533408 Q6JHZ5 121 aa12.4□□□□□ -0.42
PTP4A2-215ENST00000533408 GTF2H5Q6ZYL4 71 aa12.38□□□□□ -0.43
PTP4A2-215ENST00000533408 LINC00304Q8N9R0 145 aa12.38□□□□□ -0.43
PTP4A2-215ENST00000533408 PKHD1L1Q86WI1 4243 aa12.37□□□□□ -0.43
PTP4A2-215ENST00000533408 IGLV8-61A0A075B6I0 122 aa12.36□□□□□ -0.43
PTP4A2-215ENST00000533408 C9JAW5 83 aa12.35□□□□□ -0.43
PTP4A2-215ENST00000533408 H3BMG7 143 aa12.34□□□□□ -0.43
PTP4A2-215ENST00000533408 ANKRD29Q8N6D5 301 aa12.34□□□□□ -0.43
PTP4A2-215ENST00000533408 SPINK1P00995 79 aa12.33□□□□□ -0.44
PTP4A2-215ENST00000533408 H3BT86 120 aa12.32□□□□□ -0.44
PTP4A2-215ENST00000533408 K7EP34 96 aa12.32□□□□□ -0.44
PTP4A2-215ENST00000533408 CD164Q04900 197 aa12.32□□□□□ -0.44
PTP4A2-215ENST00000533408 JMJD7-PLA2G4BH0Y9G9 81 aa12.3□□□□□ -0.44
PTP4A2-215ENST00000533408 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
PTP4A2-215ENST00000533408 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
PTP4A2-215ENST00000533408 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
PTP4A2-215ENST00000533408 DSCR8Q96T75 97 aa12.25□□□□□ -0.45
PTP4A2-215ENST00000533408 C21orf62-AS1Q17RA5 79 aa12.24□□□□□ -0.45
PTP4A2-215ENST00000533408 IGFL1Q6UW32 110 aa12.24□□□□□ -0.45
PTP4A2-215ENST00000533408 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
PTP4A2-215ENST00000533408 PDE6GP18545 87 aa12.22□□□□□ -0.45
PTP4A2-215ENST00000533408 MYCBP2O75592 4640 aa12.21□□□□□ -0.45
PTP4A2-215ENST00000533408 F8W1H4 67 aa12.2□□□□□ -0.46
PTP4A2-215ENST00000533408 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
PTP4A2-215ENST00000533408 PCLOQ9Y6V0 5065 aa12.19□□□□□ -0.46
PTP4A2-215ENST00000533408 LRP1Q07954 4544 aaKnown RBP12.19□□□□□ -0.46
PTP4A2-215ENST00000533408 DMBT1Q9UGM3 2413 aaPredicted RBP12.18□□□□□ -0.46
PTP4A2-215ENST00000533408 Q6Q795 121 aa12.18□□□□□ -0.46
PTP4A2-215ENST00000533408 HRCT1Q6UXD1 115 aa12.18□□□□□ -0.46
PTP4A2-215ENST00000533408 FAT3Q8TDW7 4589 aa12.15□□□□□ -0.46
PTP4A2-215ENST00000533408 TRBV7-4A0A0J9YYF1 115 aa12.15□□□□□ -0.46
PTP4A2-215ENST00000533408 A0A1B0GV72 72 aa12.15□□□□□ -0.46
PTP4A2-215ENST00000533408 Q5XG85 94 aa12.15□□□□□ -0.46
PTP4A2-215ENST00000533408 MTURNQ8N3F0 131 aa12.15□□□□□ -0.46
PTP4A2-215ENST00000533408 TRBV7-7A0A0K0K1E9 115 aa12.14□□□□□ -0.47
PTP4A2-215ENST00000533408 OBSCN-AS1Q96MR7 158 aa12.14□□□□□ -0.47
PTP4A2-215ENST00000533408 SS18L2Q9UHA2 77 aa12.13□□□□□ -0.47
PTP4A2-215ENST00000533408 LOC110117498A0A087WWA1 95 aa12.12□□□□□ -0.47
PTP4A2-215ENST00000533408 A0A0G2JQZ4 141 aa12.12□□□□□ -0.47
PTP4A2-215ENST00000533408 CCKP06307 115 aa12.12□□□□□ -0.47
PTP4A2-215ENST00000533408 PRO0461Q9UI25 63 aa12.12□□□□□ -0.47
PTP4A2-215ENST00000533408 A0A1B0GW54 56 aa12.11□□□□□ -0.47
PTP4A2-215ENST00000533408 SMCPP49901 116 aaPredicted RBP12.08□□□□□ -0.48
PTP4A2-215ENST00000533408 A0A1W2PNM2 257 aa12.07□□□□□ -0.48
PTP4A2-215ENST00000533408 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
PTP4A2-215ENST00000533408 C14orf132Q9NPU4 83 aa12.07□□□□□ -0.48
PTP4A2-215ENST00000533408 A0A1B0GV90 55 aa12.06□□□□□ -0.48
PTP4A2-215ENST00000533408 ASB16-AS1Q495Z4 193 aa12.05□□□□□ -0.48
PTP4A2-215ENST00000533408 Q6ZQT0 140 aa12.05□□□□□ -0.48
PTP4A2-215ENST00000533408 FP248Q71RG6 208 aaPredicted RBP12.04□□□□□ -0.48
PTP4A2-215ENST00000533408 TNXBP22105 4242 aa12.02□□□□□ -0.48
PTP4A2-215ENST00000533408 A0A087WSZ3 146 aa12.02□□□□□ -0.49
PTP4A2-215ENST00000533408 PRR4Q16378 134 aa12□□□□□ -0.49
PTP4A2-215ENST00000533408 ETDBQ3ZM63 59 aa11.96□□□□□ -0.49
PTP4A2-215ENST00000533408 RETNLBQ9BQ08 111 aa11.96□□□□□ -0.49
PTP4A2-215ENST00000533408 C1orf195Q5TG92 126 aa11.94□□□□□ -0.5
PTP4A2-215ENST00000533408 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
PTP4A2-215ENST00000533408 NREPQ16612 68 aa11.86□□□□□ -0.51
PTP4A2-215ENST00000533408 J3KT08 172 aa11.85□□□□□ -0.51
PTP4A2-215ENST00000533408 TPRXLQ17RH7 258 aa11.82□□□□□ -0.52
PTP4A2-215ENST00000533408 LINC00472Q9H8W2 130 aa11.82□□□□□ -0.52
PTP4A2-215ENST00000533408 ACYP1P07311 99 aa11.8□□□□□ -0.52
PTP4A2-215ENST00000533408 IGKV4-1P06312 121 aa11.79□□□□□ -0.52
PTP4A2-215ENST00000533408 Q96NJ1 140 aa11.78□□□□□ -0.52
PTP4A2-215ENST00000533408 UBL5Q9BZL1 73 aa11.78□□□□□ -0.52
PTP4A2-215ENST00000533408 SIGMAR1Q99720 223 aa11.77□□□□□ -0.53
PTP4A2-215ENST00000533408 J3QR89 54 aa11.75□□□□□ -0.53
PTP4A2-215ENST00000533408 NDUFB1O75438 58 aa11.74□□□□□ -0.53
PTP4A2-215ENST00000533408 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
PTP4A2-215ENST00000533408 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
PTP4A2-215ENST00000533408 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
PTP4A2-215ENST00000533408 DEFB116Q30KQ4 102 aa11.71□□□□□ -0.53
PTP4A2-215ENST00000533408 Q6ZVQ6 151 aa11.7□□□□□ -0.54
PTP4A2-215ENST00000533408 LINC00846Q9NV44 126 aa11.7□□□□□ -0.54
PTP4A2-215ENST00000533408 HERC1Q15751 4861 aa11.68□□□□□ -0.54
PTP4A2-215ENST00000533408 BPY2O14599 106 aa11.68□□□□□ -0.54
PTP4A2-215ENST00000533408 A8MWP4 228 aa11.65□□□□□ -0.54
PTP4A2-215ENST00000533408 A0A1B0GVX0 72 aa11.63□□□□□ -0.55
PTP4A2-215ENST00000533408 C9orf92A6NGG3 77 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 863.3 ms