RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 A0A1B0GW54 56 aa13.37□□□□□ -0.27
AP004608.1-202ENST00000533390 KRTAP10-1P60331 282 aa13.37□□□□□ -0.27
AP004608.1-202ENST00000533390 DNAH11Q96DT5 4516 aa13.36□□□□□ -0.27
AP004608.1-202ENST00000533390 IGLV8-61A0A075B6I0 122 aa13.36□□□□□ -0.27
AP004608.1-202ENST00000533390 A0A1W2PNM2 257 aa13.36□□□□□ -0.27
AP004608.1-202ENST00000533390 Q6ZSA8 131 aa13.36□□□□□ -0.27
AP004608.1-202ENST00000533390 Q8NBF4 154 aa13.36□□□□□ -0.27
AP004608.1-202ENST00000533390 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
AP004608.1-202ENST00000533390 ZNF861PO60384 105 aa13.34□□□□□ -0.27
AP004608.1-202ENST00000533390 SCXQ7RTU7 201 aa13.34□□□□□ -0.27
AP004608.1-202ENST00000533390 ZNF706Q9Y5V0 76 aaPredicted RBP13.34□□□□□ -0.27
AP004608.1-202ENST00000533390 DNAH5Q8TE73 4624 aa13.34□□□□□ -0.27
AP004608.1-202ENST00000533390 HAMPP81172 84 aa13.33□□□□□ -0.27
AP004608.1-202ENST00000533390 IGFL1Q6UW32 110 aa13.32□□□□□ -0.28
AP004608.1-202ENST00000533390 DNAH8Q96JB1 4490 aa13.32□□□□□ -0.28
AP004608.1-202ENST00000533390 SPRR4Q96PI1 79 aa13.31□□□□□ -0.28
AP004608.1-202ENST00000533390 NREPQ16612 68 aa13.31□□□□□ -0.28
AP004608.1-202ENST00000533390 FAT2Q9NYQ8 4349 aa13.3□□□□□ -0.28
AP004608.1-202ENST00000533390 SACSQ9NZJ4 4579 aa13.29□□□□□ -0.28
AP004608.1-202ENST00000533390 IGLV7-43P04211 117 aa13.29□□□□□ -0.28
AP004608.1-202ENST00000533390 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
AP004608.1-202ENST00000533390 FAM236AA0A1B0GUQ0 79 aa13.28□□□□□ -0.28
AP004608.1-202ENST00000533390 FAM236BA0A1B0GV22 79 aa13.28□□□□□ -0.28
AP004608.1-202ENST00000533390 CXCL6P80162 114 aa13.27□□□□□ -0.29
AP004608.1-202ENST00000533390 PKD1P98161 4303 aa13.27□□□□□ -0.29
AP004608.1-202ENST00000533390 CRYGAP11844 174 aa13.25□□□□□ -0.29
AP004608.1-202ENST00000533390 LINC00483Q53H64 154 aa13.25□□□□□ -0.29
AP004608.1-202ENST00000533390 A0A0G2JQZ4 141 aa13.25□□□□□ -0.29
AP004608.1-202ENST00000533390 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
AP004608.1-202ENST00000533390 A0A087WVE0 104 aa13.22□□□□□ -0.29
AP004608.1-202ENST00000533390 IGLV9-49A0A0B4J1Y8 123 aa13.2□□□□□ -0.3
AP004608.1-202ENST00000533390 C9orf153Q5TBE3 101 aa13.2□□□□□ -0.3
AP004608.1-202ENST00000533390 SRRM2Q9UQ35 2752 aaKnown RBP13.18□□□□□ -0.3
AP004608.1-202ENST00000533390 BPY2O14599 106 aa13.17□□□□□ -0.3
AP004608.1-202ENST00000533390 RPL37AP61513 92 aaKnown RBP13.15□□□□□ -0.3
AP004608.1-202ENST00000533390 A0A087WSZ3 146 aa13.14□□□□□ -0.31
AP004608.1-202ENST00000533390 A0A1B0GVY2 172 aa13.13□□□□□ -0.31
AP004608.1-202ENST00000533390 ANAPC11Q9NYG5 84 aa13.12□□□□□ -0.31
AP004608.1-202ENST00000533390 ATOX1O00244 68 aa13.11□□□□□ -0.31
AP004608.1-202ENST00000533390 MOBPQ13875 183 aa13.09□□□□□ -0.31
AP004608.1-202ENST00000533390 IGKV4-1P06312 121 aa13.04□□□□□ -0.32
AP004608.1-202ENST00000533390 Q8N9L7 120 aa13.04□□□□□ -0.32
AP004608.1-202ENST00000533390 RYR2Q92736 4967 aa13.01□□□□□ -0.33
AP004608.1-202ENST00000533390 DSCR10P59022 87 aa12.99□□□□□ -0.33
AP004608.1-202ENST00000533390 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
AP004608.1-202ENST00000533390 LRP1BQ9NZR2 4599 aa12.98□□□□□ -0.33
AP004608.1-202ENST00000533390 DEFB116Q30KQ4 102 aa12.97□□□□□ -0.33
AP004608.1-202ENST00000533390 SS18L2Q9UHA2 77 aa12.95□□□□□ -0.34
AP004608.1-202ENST00000533390 SSBP3-AS1Q7Z2R9 100 aa12.95□□□□□ -0.34
AP004608.1-202ENST00000533390 PKHD1P08F94 4074 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 CCDC179H3BU77 68 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 K7EQZ3 153 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 FAM229BQ4G0N7 80 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 LINC00472Q9H8W2 130 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 SERP2Q8N6R1 65 aa12.93□□□□□ -0.34
AP004608.1-202ENST00000533390 COX7CP15954 63 aa12.92□□□□□ -0.34
AP004608.1-202ENST00000533390 UQCRQO14949 82 aa12.91□□□□□ -0.34
AP004608.1-202ENST00000533390 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
AP004608.1-202ENST00000533390 DYNC1H1Q14204 4646 aaKnown RBP12.9□□□□□ -0.35
AP004608.1-202ENST00000533390 SMR3BP02814 79 aaPredicted RBP12.89□□□□□ -0.35
AP004608.1-202ENST00000533390 SMIM20Q8N5G0 67 aa12.89□□□□□ -0.35
AP004608.1-202ENST00000533390 A0A087X002 238 aa12.88□□□□□ -0.35
AP004608.1-202ENST00000533390 J3KT08 172 aa12.88□□□□□ -0.35
AP004608.1-202ENST00000533390 CD164Q04900 197 aa12.88□□□□□ -0.35
AP004608.1-202ENST00000533390 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
AP004608.1-202ENST00000533390 KRTAP1-4P0C5Y4 121 aa12.86□□□□□ -0.35
AP004608.1-202ENST00000533390 KRTAP13-2Q52LG2 175 aa12.85□□□□□ -0.35
AP004608.1-202ENST00000533390 A8MWP4 228 aa12.84□□□□□ -0.35
AP004608.1-202ENST00000533390 TRAV7A0A075B6U4 112 aa12.83□□□□□ -0.36
AP004608.1-202ENST00000533390 VPS13BQ7Z7G8 4022 aa12.83□□□□□ -0.36
AP004608.1-202ENST00000533390 Q96NJ1 140 aa12.82□□□□□ -0.36
AP004608.1-202ENST00000533390 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
AP004608.1-202ENST00000533390 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
AP004608.1-202ENST00000533390 PRR15Q8IV56 129 aa12.8□□□□□ -0.36
AP004608.1-202ENST00000533390 NDUFB1O75438 58 aa12.8□□□□□ -0.36
AP004608.1-202ENST00000533390 APOBP04114 4563 aaKnown RBP12.74□□□□□ -0.37
AP004608.1-202ENST00000533390 CDK2AP2O75956 126 aa12.74□□□□□ -0.37
AP004608.1-202ENST00000533390 WFDC13Q8IUB5 93 aa12.73□□□□□ -0.37
AP004608.1-202ENST00000533390 TYMSOSQ8TAI1 123 aa12.73□□□□□ -0.37
AP004608.1-202ENST00000533390 OCR1Q9BZK8 76 aa12.72□□□□□ -0.37
AP004608.1-202ENST00000533390 KRTAP10-4P60372 401 aaPredicted RBP12.7□□□□□ -0.38
AP004608.1-202ENST00000533390 ASB16-AS1Q495Z4 193 aa12.7□□□□□ -0.38
AP004608.1-202ENST00000533390 C4orf48Q5BLP8 95 aa12.68□□□□□ -0.38
AP004608.1-202ENST00000533390 CASC2Q6XLA1 102 aa12.68□□□□□ -0.38
AP004608.1-202ENST00000533390 C20orf197Q8N268 126 aa12.67□□□□□ -0.38
AP004608.1-202ENST00000533390 KRTAP29-1A8MX34 341 aaPredicted RBP12.65□□□□□ -0.38
AP004608.1-202ENST00000533390 Q5XG85 94 aa12.65□□□□□ -0.38
AP004608.1-202ENST00000533390 LIMD2Q9BT23 127 aa12.65□□□□□ -0.38
AP004608.1-202ENST00000533390 A0A1B0GVX0 72 aa12.65□□□□□ -0.38
AP004608.1-202ENST00000533390 PRR26Q8N8Z3 221 aa12.64□□□□□ -0.39
AP004608.1-202ENST00000533390 MMP24-AS1A0A0U1RRL7 71 aa12.63□□□□□ -0.39
AP004608.1-202ENST00000533390 FAM229AH3BQW9 127 aa12.63□□□□□ -0.39
AP004608.1-202ENST00000533390 IGHV6-1A0A0B4J1U7 121 aa12.63□□□□□ -0.39
AP004608.1-202ENST00000533390 C8orf17Q9NRJ1 99 aa12.61□□□□□ -0.39
AP004608.1-202ENST00000533390 RYR3Q15413 4870 aa12.61□□□□□ -0.39
AP004608.1-202ENST00000533390 hDV103S1A0JD37 113 aa12.6□□□□□ -0.39
AP004608.1-202ENST00000533390 SPINK1P00995 79 aa12.59□□□□□ -0.39
AP004608.1-202ENST00000533390 KLKP1Q107X0 134 aa12.57□□□□□ -0.4
AP004608.1-202ENST00000533390 LINC00304Q8N9R0 145 aa12.57□□□□□ -0.4
AP004608.1-202ENST00000533390 TMEM254Q8TBM7 123 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms