RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 HIST1H4GQ99525 98 aa12.72□□□□□ -0.37
SMPD1-209ENST00000533196 PCOTHQ58A44 107 aa12.71□□□□□ -0.37
SMPD1-209ENST00000533196 IGLV8-61A0A075B6I0 122 aa12.7□□□□□ -0.38
SMPD1-209ENST00000533196 DLEU1O43261 78 aa12.7□□□□□ -0.38
SMPD1-209ENST00000533196 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.7□□□□□ -0.38
SMPD1-209ENST00000533196 PPDPFLQ8WWR9 84 aa12.69□□□□□ -0.38
SMPD1-209ENST00000533196 CLEC2BQ92478 149 aa12.66□□□□□ -0.38
SMPD1-209ENST00000533196 C12orf57Q99622 126 aa12.65□□□□□ -0.38
SMPD1-209ENST00000533196 OCIAD2Q56VL3 154 aa12.64□□□□□ -0.39
SMPD1-209ENST00000533196 IGFL1Q6UW32 110 aa12.62□□□□□ -0.39
SMPD1-209ENST00000533196 TRBV7-7A0A0K0K1E9 115 aa12.61□□□□□ -0.39
SMPD1-209ENST00000533196 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
SMPD1-209ENST00000533196 RPL37P61927 97 aaKnown RBP12.6□□□□□ -0.39
SMPD1-209ENST00000533196 LCE2CQ5TA81 110 aa12.59□□□□□ -0.39
SMPD1-209ENST00000533196 SNHG12Q9BXW3 62 aa12.59□□□□□ -0.39
SMPD1-209ENST00000533196 SNCGO76070 127 aa12.58□□□□□ -0.4
SMPD1-209ENST00000533196 CFC1BP0CG36 223 aa12.57□□□□□ -0.4
SMPD1-209ENST00000533196 CFC1P0CG37 223 aa12.57□□□□□ -0.4
SMPD1-209ENST00000533196 KRTAP19-2Q3LHN2 52 aa12.57□□□□□ -0.4
SMPD1-209ENST00000533196 RAB37Q96AX2 223 aa12.57□□□□□ -0.4
SMPD1-209ENST00000533196 A0A0B4J2C4 111 aa12.56□□□□□ -0.4
SMPD1-209ENST00000533196 C14orf144Q96I85 54 aa12.56□□□□□ -0.4
SMPD1-209ENST00000533196 H0YGX0 51 aa12.55□□□□□ -0.4
SMPD1-209ENST00000533196 SPATA45Q537H7 98 aa12.55□□□□□ -0.4
SMPD1-209ENST00000533196 PAM16Q9Y3D7 125 aa12.53□□□□□ -0.4
SMPD1-209ENST00000533196 VAMP8Q9BV40 100 aa12.51□□□□□ -0.41
SMPD1-209ENST00000533196 C2orf91Q6ZV80 131 aa12.48□□□□□ -0.41
SMPD1-209ENST00000533196 H3BUT2 72 aa12.47□□□□□ -0.41
SMPD1-209ENST00000533196 GHRHP01286 108 aa12.47□□□□□ -0.41
SMPD1-209ENST00000533196 Q6Q795 121 aa12.47□□□□□ -0.41
SMPD1-209ENST00000533196 A0A1B0GX51 115 aa12.46□□□□□ -0.41
SMPD1-209ENST00000533196 LST1O00453 97 aa12.46□□□□□ -0.41
SMPD1-209ENST00000533196 MT1HP80294 61 aa12.46□□□□□ -0.41
SMPD1-209ENST00000533196 SS18L2Q9UHA2 77 aa12.46□□□□□ -0.41
SMPD1-209ENST00000533196 TMEM238LA0A1B0GVL6 79 aa12.45□□□□□ -0.42
SMPD1-209ENST00000533196 A6NJY4 79 aa12.45□□□□□ -0.42
SMPD1-209ENST00000533196 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
SMPD1-209ENST00000533196 CEND1Q8N111 149 aa12.45□□□□□ -0.42
SMPD1-209ENST00000533196 KRTAP9-6A0A140TA67 174 aa12.43□□□□□ -0.42
SMPD1-209ENST00000533196 FAM218AQ96MZ4 157 aa12.43□□□□□ -0.42
SMPD1-209ENST00000533196 PRO1854Q9UHT4 67 aa12.43□□□□□ -0.42
SMPD1-209ENST00000533196 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
SMPD1-209ENST00000533196 TEN1Q86WV5 123 aa12.42□□□□□ -0.42
SMPD1-209ENST00000533196 Q75L30 129 aa12.39□□□□□ -0.43
SMPD1-209ENST00000533196 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
SMPD1-209ENST00000533196 ATP11AUNQ6ZP68 121 aa12.36□□□□□ -0.43
SMPD1-209ENST00000533196 H3BMG7 143 aa12.34□□□□□ -0.43
SMPD1-209ENST00000533196 FXYD2P54710 66 aa12.34□□□□□ -0.43
SMPD1-209ENST00000533196 COX6B2Q6YFQ2 88 aa12.33□□□□□ -0.44
SMPD1-209ENST00000533196 FABP2P12104 132 aa12.32□□□□□ -0.44
SMPD1-209ENST00000533196 A0A087WSZ3 146 aa12.3□□□□□ -0.44
SMPD1-209ENST00000533196 TRIAP1O43715 76 aa12.3□□□□□ -0.44
SMPD1-209ENST00000533196 H3BQ85 93 aa12.29□□□□□ -0.44
SMPD1-209ENST00000533196 HSD52Q0P140 79 aa12.28□□□□□ -0.44
SMPD1-209ENST00000533196 Q96NJ1 140 aa12.28□□□□□ -0.44
SMPD1-209ENST00000533196 DNAL4O96015 105 aa12.26□□□□□ -0.45
SMPD1-209ENST00000533196 PYY3Q5JQD4 70 aa12.26□□□□□ -0.45
SMPD1-209ENST00000533196 LORP23490 312 aaPredicted RBP12.24□□□□□ -0.45
SMPD1-209ENST00000533196 KRTAP10-6P60371 365 aaPredicted RBP12.24□□□□□ -0.45
SMPD1-209ENST00000533196 C20orf166-AS1Q96NR2 134 aa12.24□□□□□ -0.45
SMPD1-209ENST00000533196 ORMDL1Q9P0S3 153 aa12.24□□□□□ -0.45
SMPD1-209ENST00000533196 M0R2T5 61 aa12.23□□□□□ -0.45
SMPD1-209ENST00000533196 COX6CP09669 75 aa12.23□□□□□ -0.45
SMPD1-209ENST00000533196 A0A1W2PNM2 257 aa12.22□□□□□ -0.45
SMPD1-209ENST00000533196 FLGP20930 4061 aaPredicted RBP12.22□□□□□ -0.45
SMPD1-209ENST00000533196 PSMB2P49721 201 aa12.21□□□□□ -0.45
SMPD1-209ENST00000533196 A8MUU9 505 aa12.2□□□□□ -0.46
SMPD1-209ENST00000533196 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
SMPD1-209ENST00000533196 TMEM256-PLSCR3K7ERE1 68 aa12.19□□□□□ -0.46
SMPD1-209ENST00000533196 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
SMPD1-209ENST00000533196 K7ERJ3 54 aa12.16□□□□□ -0.46
SMPD1-209ENST00000533196 UQCR10Q9UDW1 63 aa12.15□□□□□ -0.46
SMPD1-209ENST00000533196 SIGMAR1Q99720 223 aa12.13□□□□□ -0.47
SMPD1-209ENST00000533196 CRCT1Q9UGL9 99 aa12.12□□□□□ -0.47
SMPD1-209ENST00000533196 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
SMPD1-209ENST00000533196 DSCR10P59022 87 aa12.1□□□□□ -0.47
SMPD1-209ENST00000533196 TRACP01848 142 aa12.09□□□□□ -0.47
SMPD1-209ENST00000533196 IGKV4-1P06312 121 aa12.09□□□□□ -0.47
SMPD1-209ENST00000533196 LINC00313P59037 77 aa12.08□□□□□ -0.48
SMPD1-209ENST00000533196 FSIP2Q5CZC0 6907 aa12.08□□□□□ -0.48
SMPD1-209ENST00000533196 CCKP06307 115 aa12.07□□□□□ -0.48
SMPD1-209ENST00000533196 A0A1B0GV72 72 aa12.06□□□□□ -0.48
SMPD1-209ENST00000533196 LINC00472Q9H8W2 130 aa12.05□□□□□ -0.48
SMPD1-209ENST00000533196 TRBV20-1A0A075B6N2 111 aa12.04□□□□□ -0.48
SMPD1-209ENST00000533196 SCGB1C2P0DMR2 95 aa12.02□□□□□ -0.49
SMPD1-209ENST00000533196 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
SMPD1-209ENST00000533196 TMA7Q9Y2S6 64 aaKnown RBP12□□□□□ -0.49
SMPD1-209ENST00000533196 RBM3P98179 157 aaKnown RBP11.99□□□□□ -0.49
SMPD1-209ENST00000533196 C21orf62-AS1Q17RA5 79 aa11.96□□□□□ -0.49
SMPD1-209ENST00000533196 DSCR8Q96T75 97 aa11.96□□□□□ -0.49
SMPD1-209ENST00000533196 DEFB116Q30KQ4 102 aa11.95□□□□□ -0.5
SMPD1-209ENST00000533196 NOTCH2NLQ7Z3S9 236 aa11.93□□□□□ -0.5
SMPD1-209ENST00000533196 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
SMPD1-209ENST00000533196 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
SMPD1-209ENST00000533196 C8orf87E5RJ46 101 aa11.91□□□□□ -0.5
SMPD1-209ENST00000533196 BAALC-AS2P0C853 105 aa11.9□□□□□ -0.5
SMPD1-209ENST00000533196 C9JAW5 83 aa11.88□□□□□ -0.51
SMPD1-209ENST00000533196 A0A1B0GVX0 72 aa11.87□□□□□ -0.51
SMPD1-209ENST00000533196 J3KT08 172 aa11.87□□□□□ -0.51
SMPD1-209ENST00000533196 M0R143 59 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms