RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 FAT1Q14517 4588 aa8.66□□□□□ -1.02
TRIM3-212ENST00000533064 ERC2-IT1O76042 136 aa8.65□□□□□ -1.03
TRIM3-212ENST00000533064 Q8N1X5 172 aa8.64□□□□□ -1.03
TRIM3-212ENST00000533064 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
TRIM3-212ENST00000533064 ZNF706Q9Y5V0 76 aaPredicted RBP8.64□□□□□ -1.03
TRIM3-212ENST00000533064 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
TRIM3-212ENST00000533064 C14orf132Q9NPU4 83 aa8.63□□□□□ -1.03
TRIM3-212ENST00000533064 FAM240AA0A1B0GVK7 77 aa8.62□□□□□ -1.03
TRIM3-212ENST00000533064 KRTAP10-4P60372 401 aaPredicted RBP8.62□□□□□ -1.03
TRIM3-212ENST00000533064 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
TRIM3-212ENST00000533064 NDUFV3P56181 108 aaKnown RBP8.61□□□□□ -1.03
TRIM3-212ENST00000533064 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
TRIM3-212ENST00000533064 RBM3P98179 157 aaKnown RBP8.61□□□□□ -1.03
TRIM3-212ENST00000533064 Q8N377 158 aa8.61□□□□□ -1.03
TRIM3-212ENST00000533064 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
TRIM3-212ENST00000533064 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
TRIM3-212ENST00000533064 BIRC6Q9NR09 4857 aa8.6□□□□□ -1.03
TRIM3-212ENST00000533064 ACYP1P07311 99 aa8.59□□□□□ -1.03
TRIM3-212ENST00000533064 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
TRIM3-212ENST00000533064 SPRR4Q96PI1 79 aa8.58□□□□□ -1.04
TRIM3-212ENST00000533064 CDIP1Q9H305 208 aa8.58□□□□□ -1.04
TRIM3-212ENST00000533064 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
TRIM3-212ENST00000533064 CCKP06307 115 aa8.56□□□□□ -1.04
TRIM3-212ENST00000533064 DSCR8Q96T75 97 aa8.56□□□□□ -1.04
TRIM3-212ENST00000533064 PDE6GP18545 87 aa8.56□□□□□ -1.04
TRIM3-212ENST00000533064 Q6ZQT0 140 aa8.55□□□□□ -1.04
TRIM3-212ENST00000533064 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
TRIM3-212ENST00000533064 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
TRIM3-212ENST00000533064 SPRR1BP22528 89 aa8.53□□□□□ -1.04
TRIM3-212ENST00000533064 LINC00483Q53H64 154 aa8.53□□□□□ -1.04
TRIM3-212ENST00000533064 ANAPC13Q9BS18 74 aa8.53□□□□□ -1.04
TRIM3-212ENST00000533064 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
TRIM3-212ENST00000533064 KRTAP17-1Q9BYP8 105 aa8.52□□□□□ -1.05
TRIM3-212ENST00000533064 F8WEM9 126 aa8.51□□□□□ -1.05
TRIM3-212ENST00000533064 SS18L2Q9UHA2 77 aa8.51□□□□□ -1.05
TRIM3-212ENST00000533064 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
TRIM3-212ENST00000533064 ANAPC11Q9NYG5 84 aa8.5□□□□□ -1.05
TRIM3-212ENST00000533064 FAM229BQ4G0N7 80 aa8.49□□□□□ -1.05
TRIM3-212ENST00000533064 Q6Q795 121 aa8.49□□□□□ -1.05
TRIM3-212ENST00000533064 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
TRIM3-212ENST00000533064 CRYGAP11844 174 aa8.48□□□□□ -1.05
TRIM3-212ENST00000533064 FLG2Q5D862 2391 aaPredicted RBP8.48□□□□□ -1.05
TRIM3-212ENST00000533064 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
TRIM3-212ENST00000533064 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
TRIM3-212ENST00000533064 C9orf153Q5TBE3 101 aa8.46□□□□□ -1.05
TRIM3-212ENST00000533064 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
TRIM3-212ENST00000533064 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
TRIM3-212ENST00000533064 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
TRIM3-212ENST00000533064 A0A087X002 238 aa8.43□□□□□ -1.06
TRIM3-212ENST00000533064 MOBPQ13875 183 aa8.43□□□□□ -1.06
TRIM3-212ENST00000533064 Q8NBF4 154 aa8.43□□□□□ -1.06
TRIM3-212ENST00000533064 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
TRIM3-212ENST00000533064 HERC2O95714 4834 aa8.42□□□□□ -1.06
TRIM3-212ENST00000533064 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
TRIM3-212ENST00000533064 A0A1B0GW54 56 aa8.4□□□□□ -1.06
TRIM3-212ENST00000533064 Q6JHZ5 121 aa8.4□□□□□ -1.06
TRIM3-212ENST00000533064 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
TRIM3-212ENST00000533064 TYMSOSQ8TAI1 123 aa8.4□□□□□ -1.06
TRIM3-212ENST00000533064 UBL5Q9BZL1 73 aa8.4□□□□□ -1.06
TRIM3-212ENST00000533064 KRTAP13-2Q52LG2 175 aa8.4□□□□□ -1.07
TRIM3-212ENST00000533064 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.07
TRIM3-212ENST00000533064 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
TRIM3-212ENST00000533064 IGFL1Q6UW32 110 aa8.39□□□□□ -1.07
TRIM3-212ENST00000533064 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
TRIM3-212ENST00000533064 TRBV7-7A0A0K0K1E9 115 aa8.35□□□□□ -1.07
TRIM3-212ENST00000533064 Q6ZVQ6 151 aa8.35□□□□□ -1.07
TRIM3-212ENST00000533064 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
TRIM3-212ENST00000533064 OXTP01178 125 aa8.34□□□□□ -1.07
TRIM3-212ENST00000533064 ATP5EP2Q5VTU8 51 aa8.34□□□□□ -1.07
TRIM3-212ENST00000533064 IMUPQ9GZP8 106 aa8.34□□□□□ -1.07
TRIM3-212ENST00000533064 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
TRIM3-212ENST00000533064 A0A0G2JQZ4 141 aa8.33□□□□□ -1.08
TRIM3-212ENST00000533064 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
TRIM3-212ENST00000533064 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
TRIM3-212ENST00000533064 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
TRIM3-212ENST00000533064 CCDC179H3BU77 68 aa8.31□□□□□ -1.08
TRIM3-212ENST00000533064 NREPQ16612 68 aa8.3□□□□□ -1.08
TRIM3-212ENST00000533064 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
TRIM3-212ENST00000533064 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
TRIM3-212ENST00000533064 HRCT1Q6UXD1 115 aa8.3□□□□□ -1.08
TRIM3-212ENST00000533064 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
TRIM3-212ENST00000533064 CD164Q04900 197 aa8.29□□□□□ -1.08
TRIM3-212ENST00000533064 CXCL6P80162 114 aa8.28□□□□□ -1.08
TRIM3-212ENST00000533064 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
TRIM3-212ENST00000533064 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.08
TRIM3-212ENST00000533064 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
TRIM3-212ENST00000533064 TNXBP22105 4242 aa8.27□□□□□ -1.09
TRIM3-212ENST00000533064 SPINK1P00995 79 aa8.26□□□□□ -1.09
TRIM3-212ENST00000533064 RPS28P62857 69 aaKnown RBP8.26□□□□□ -1.09
TRIM3-212ENST00000533064 A0A087WSZ3 146 aa8.25□□□□□ -1.09
TRIM3-212ENST00000533064 J3KT08 172 aa8.24□□□□□ -1.09
TRIM3-212ENST00000533064 MT1HL1P0DM35 61 aa8.24□□□□□ -1.09
TRIM3-212ENST00000533064 J3QL48 77 aa8.23□□□□□ -1.09
TRIM3-212ENST00000533064 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
TRIM3-212ENST00000533064 BPY2O14599 106 aa8.22□□□□□ -1.09
TRIM3-212ENST00000533064 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.09
TRIM3-212ENST00000533064 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
TRIM3-212ENST00000533064 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
TRIM3-212ENST00000533064 UQCRQO14949 82 aa8.18□□□□□ -1.1
TRIM3-212ENST00000533064 A0A087WVE0 104 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms