RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 IGLV6-57P01721 117 aa4.55□□□□□ -1.68
TGFBR3-209ENST00000532540 KRTAP21-3Q3LHN1 58 aa4.54□□□□□ -1.68
TGFBR3-209ENST00000532540 C19orf73Q9NVV2 129 aa4.54□□□□□ -1.68
TGFBR3-209ENST00000532540 Q8NBF4 154 aa4.54□□□□□ -1.68
TGFBR3-209ENST00000532540 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
TGFBR3-209ENST00000532540 EGFEM1PQ0D2K5 195 aa4.54□□□□□ -1.68
TGFBR3-209ENST00000532540 X6R8D5 127 aa4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 ANK3Q12955 4377 aaKnown RBP4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 K7EQZ3 153 aa4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 GIG44P09565 113 aaPredicted RBP4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 ST20-AS1Q8NBB2 130 aa4.53□□□□□ -1.68
TGFBR3-209ENST00000532540 A0A087WSZ3 146 aa4.53□□□□□ -1.69
TGFBR3-209ENST00000532540 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
TGFBR3-209ENST00000532540 Q75L30 129 aa4.52□□□□□ -1.69
TGFBR3-209ENST00000532540 PHF5AQ7RTV0 110 aaKnown RBP4.52□□□□□ -1.69
TGFBR3-209ENST00000532540 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
TGFBR3-209ENST00000532540 RPL37AP8A6NKH3 93 aa4.51□□□□□ -1.69
TGFBR3-209ENST00000532540 LELP1Q5T871 98 aa4.49□□□□□ -1.69
TGFBR3-209ENST00000532540 Q9BRP9 147 aa4.49□□□□□ -1.69
TGFBR3-209ENST00000532540 A0A096LNI7 61 aa4.49□□□□□ -1.69
TGFBR3-209ENST00000532540 Q8NAQ8 132 aa4.49□□□□□ -1.69
TGFBR3-209ENST00000532540 LINC00528Q8N1L1 170 aa4.48□□□□□ -1.69
TGFBR3-209ENST00000532540 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
TGFBR3-209ENST00000532540 CSNK1G2-AS1Q8NCQ2 148 aa4.47□□□□□ -1.69
TGFBR3-209ENST00000532540 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
TGFBR3-209ENST00000532540 ZNF706Q9Y5V0 76 aaPredicted RBP4.47□□□□□ -1.69
TGFBR3-209ENST00000532540 A0A1B0GU69 56 aa4.47□□□□□ -1.69
TGFBR3-209ENST00000532540 LINC00313P59037 77 aa4.46□□□□□ -1.7
TGFBR3-209ENST00000532540 KCNQ1DNQ9H478 68 aa4.46□□□□□ -1.7
TGFBR3-209ENST00000532540 MOBPQ13875 183 aa4.46□□□□□ -1.7
TGFBR3-209ENST00000532540 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
TGFBR3-209ENST00000532540 TP53AIP1Q9HCN2 124 aa4.45□□□□□ -1.7
TGFBR3-209ENST00000532540 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 Q8N377 158 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 C7orf33Q8WU49 177 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 MEGF8Q7Z7M0 2845 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 A6NN06 94 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 A8MU10 97 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
TGFBR3-209ENST00000532540 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
TGFBR3-209ENST00000532540 K7ERS5 55 aa4.43□□□□□ -1.7
TGFBR3-209ENST00000532540 Q6ZRX8 168 aa4.43□□□□□ -1.7
TGFBR3-209ENST00000532540 WWC2-AS2Q96NR7 200 aa4.43□□□□□ -1.7
TGFBR3-209ENST00000532540 NUPR2A6NF83 97 aa4.42□□□□□ -1.7
TGFBR3-209ENST00000532540 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
TGFBR3-209ENST00000532540 IGLV5-48A0A075B6I7 105 aa4.42□□□□□ -1.7
TGFBR3-209ENST00000532540 DSCR10P59022 87 aa4.42□□□□□ -1.7
TGFBR3-209ENST00000532540 ACYP2P14621 99 aa4.42□□□□□ -1.7
TGFBR3-209ENST00000532540 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
TGFBR3-209ENST00000532540 ZCCHC13Q8WW36 166 aaKnown RBP4.41□□□□□ -1.7
TGFBR3-209ENST00000532540 REG3GQ6UW15 175 aa4.4□□□□□ -1.7
TGFBR3-209ENST00000532540 UQCR11O14957 56 aa4.4□□□□□ -1.7
TGFBR3-209ENST00000532540 SRRM2Q9UQ35 2752 aaKnown RBP4.4□□□□□ -1.71
TGFBR3-209ENST00000532540 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.71
TGFBR3-209ENST00000532540 A8MWP4 228 aa4.4□□□□□ -1.71
TGFBR3-209ENST00000532540 Q8NDZ9 215 aa4.39□□□□□ -1.71
TGFBR3-209ENST00000532540 IGLV7-46A0A075B6I9 117 aa4.39□□□□□ -1.71
TGFBR3-209ENST00000532540 SPINK7P58062 85 aa4.39□□□□□ -1.71
TGFBR3-209ENST00000532540 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
TGFBR3-209ENST00000532540 SPRR4Q96PI1 79 aa4.37□□□□□ -1.71
TGFBR3-209ENST00000532540 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
TGFBR3-209ENST00000532540 LCE6AA0A183 80 aa4.36□□□□□ -1.71
TGFBR3-209ENST00000532540 PRLHP81277 87 aa4.36□□□□□ -1.71
TGFBR3-209ENST00000532540 IGFL1Q6UW32 110 aa4.36□□□□□ -1.71
TGFBR3-209ENST00000532540 SPINK6Q6UWN8 80 aa4.35□□□□□ -1.71
TGFBR3-209ENST00000532540 PRR26Q8N8Z3 221 aa4.35□□□□□ -1.71
TGFBR3-209ENST00000532540 C1orf134Q5TEV5 83 aa4.35□□□□□ -1.71
TGFBR3-209ENST00000532540 CASC10Q5T4H9 136 aa4.34□□□□□ -1.71
TGFBR3-209ENST00000532540 COL7A1Q02388 2944 aa4.34□□□□□ -1.72
TGFBR3-209ENST00000532540 A0A0G2JQZ4 141 aa4.34□□□□□ -1.72
TGFBR3-209ENST00000532540 A0A1W2PNN7 141 aa4.34□□□□□ -1.72
TGFBR3-209ENST00000532540 IGLV9-49A0A0B4J1Y8 123 aa4.33□□□□□ -1.72
TGFBR3-209ENST00000532540 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
TGFBR3-209ENST00000532540 IGLV8-61A0A075B6I0 122 aa4.32□□□□□ -1.72
TGFBR3-209ENST00000532540 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
TGFBR3-209ENST00000532540 PRR34Q9NV39 138 aa4.32□□□□□ -1.72
TGFBR3-209ENST00000532540 ANK2Q01484 3957 aa4.32□□□□□ -1.72
TGFBR3-209ENST00000532540 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
TGFBR3-209ENST00000532540 IGLV1-50A0A075B6I6 118 aa4.3□□□□□ -1.72
TGFBR3-209ENST00000532540 PLA2G1BP04054 148 aaKnown RBP4.3□□□□□ -1.72
TGFBR3-209ENST00000532540 APLNQ9ULZ1 77 aa4.3□□□□□ -1.72
TGFBR3-209ENST00000532540 FLG2Q5D862 2391 aaPredicted RBP4.3□□□□□ -1.72
TGFBR3-209ENST00000532540 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
TGFBR3-209ENST00000532540 SPINK1P00995 79 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 HRES1P13985 223 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 CHTF8P0CG12 524 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
TGFBR3-209ENST00000532540 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
TGFBR3-209ENST00000532540 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
TGFBR3-209ENST00000532540 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
TGFBR3-209ENST00000532540 ADM2Q7Z4H4 148 aa4.28□□□□□ -1.72
TGFBR3-209ENST00000532540 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
TGFBR3-209ENST00000532540 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
TGFBR3-209ENST00000532540 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
TGFBR3-209ENST00000532540 KRTAP1-5Q9BYS1 174 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms